| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP016816 | = 437908 | 405 (0.260) | 404 (0.270) +ATAA |
66/244 | 26.9 | 50.7% | intergenic (‑212/+210) | JCVSYN2_01985/JCVSYN2_01990 | glycosyl transferase/ABC transporter permease |
| ? | CP016816 | 437909 = | 405 (0.260) | intergenic (‑213/+209) | JCVSYN2_01985/JCVSYN2_01990 | glycosyl transferase/ABC transporter permease | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Only 100 of 797 total aligned reads displayed.
CATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAA‑GCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTTTAAAACTTAATATTTTTTAACAT > CP016816/437781‑438035 | attttttAATATATATTATATATAAAAATTTTATTTTTAAAATAAATATTTTATTAATTGAATCATATCAAAAAACTAAATATTACATATAGA‑‑‑GTTA‑‑‑T‑‑T‑‑T‑‑‑‑‑‑atatatatatatatatatatatatatat < 1:3094644/126‑1 (MQ=255) aTTTTTTATAAATATTATAAATAAAAATTTTATTTTTAAAATATATATTTTATTAAAAGAATCAAATCAAAAACCTCCATAAAAACTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑G‑‑‑‑‑‑atatatatatatatatatatatatatata < 2:2281659/128‑2 (MQ=255) aTTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑G‑‑‑‑‑‑atatatatatatatatatatatatatata > 2:596693/1‑127 (MQ=255) aTTTTTAATAAATATAATAAATATAAATTGTATTTTTAAAATAAATATTTTTTTATAAGAATCAAAGCAAAAAACACAATATTACCTATAGA‑‑‑GATA‑‑‑A‑‑T‑‑G‑‑‑‑‑‑atatatatatatatatatatatatatata < 1:1247023/128‑2 (MQ=255) tttAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑G‑‑‑‑‑‑atatatatatatatatatatatatatatatat > 2:370834/1‑124 (MQ=255) tttAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑G‑‑‑‑‑‑atatatatatatatatatatatatatatatat > 1:1852078/1‑124 (MQ=255) tttAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑G‑‑‑‑‑‑atatatatatatatatatatatatatataata > 2:1196961/1‑124 (MQ=255) aataaataTTAGAAATAAAAATTGTATTTTTATAATAAATATTTTATGAAATTAAGAAAATAAAAAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑G‑‑‑‑‑‑atatatatatatatatatatatatatatatatgca < 2:243717/128‑8 (MQ=255) aataaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑G‑‑‑‑‑‑atatatatatatatatatatatatatatatattaa > 2:299785/1‑121 (MQ=255) ataaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑G‑‑‑‑‑‑atatatatatatatatatatatatatatatatgaaa > 2:1922172/1‑120 (MQ=255) tatatatTAGATATAAAAATTTTATTTTTAAAATAAATATTTTATGAAATTAATCAAATAAAAAAACTCCATATTAAATATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑T‑‑‑‑‑‑atatatatatatatatatatatatatatatatgcaag < 1:254419/125‑10 (MQ=255) aaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTATTAAATGAATCAAATCAAAAACCTCCATATTAACTATAGA‑‑‑GATA‑‑‑A‑‑T‑‑GAT‑‑‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAA‑GCGa < 2:2758423/128‑1 (MQ=255) ttATAAATAAATATTTTATTTTTAAAAAATATATTTTATTAAATCAATAAAATAAAAAATCTATATATTATATATAGA‑‑‑TTTAT‑‑A‑‑TA‑T‑‑‑‑‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAA‑GCGATCAGc < 1:170403/128‑1 (MQ=255) ttAGAAATAAAAAATGTATTTTTAAAATAAATATTTTATTTAATGAAGCAAATAAAAAAACTCCATATTATATATAGA‑‑‑GTTA‑‑‑ATTT‑‑T‑‑‑‑‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAA‑GCGATCAGc < 2:328058/128‑1 (MQ=255) tAGAAATAAAAATTGTATTGTTAAAATAAATAATTTAGGAAATGAAGCAAAGCAAAAACATACATATTACCTATAGA‑‑‑CTTA‑‑‑A‑‑T‑‑G‑‑‑‑‑‑ATATATTTATATATATATATATATATATCA‑‑‑‑GCAA‑GCTATCataa > 2:2364176/1‑125 (MQ=255) aGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATGAAGCAAAGCAAAAAACTCCATATTAACTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATAT‑‑‑‑‑‑GCAA‑GCGATCAGCATaaaa < 1:2884196/128‑1 (MQ=255) gataTAAAAATTTTATTTTTAAAATAAATATTTTAGGAAATGAATCAAAGAAAAAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑TTAT‑‑‑‑‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAA‑GCGATCAGCATa < 1:1282692/125‑1 (MQ=255) aaaaTTGTATATTTAAAATAAATATTTTATTAAATGAAGCAAAGCAAAAAACTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATAT‑‑‑‑‑‑GCAA‑GCGATCAGCATAAAATGGTGaa < 2:85439/128‑1 (MQ=255) ttttATTTATAAAATAAATATTTTATTAAATTAATAAAATCAAAAAAATAAATATAAACTATAGATATATTT‑‑‑A‑‑TA‑T‑‑‑‑‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAA‑GCGATCAGCATAAAATGGTg < 2:2693526/125‑1 (MQ=255) tGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GATAT‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAA‑GCGATCAGCATAAAATGGTGa > 2:264053/1‑128 (MQ=255) tGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GATAT‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑ACAA‑GCGATCAACATAAAATTGTGa > 1:654657/1‑128 (MQ=255) gTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATATA‑‑‑GTTA‑‑‑A‑‑T‑‑GATAT‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GAAA‑GCGATAATCATAAACTGGTGaa > 1:1084306/1‑128 (MQ=255) aTTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GATAT‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAA‑GCGATCATCATAAAATGGTGAAAt > 1:1415851/1‑128 (MQ=255) aTTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTACATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATATATA‑‑‑TCAACGCTATCAGAATAAAATGGTGAAAt > 2:2538616/1‑128 (MQ=255) tttttAAAATAAATATTTTAGTAAATGAATCAAAGAAAAAACCTCCATATTAAATATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATAT‑‑‑‑‑‑GCAA‑GCGATCAGCATAAAATGGTGAAATTTAGATc < 1:2808346/128‑1 (MQ=255) tttttAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GATAT‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAA‑GCGATCAGCATAAAATGGTGAAAtt > 1:3230835/1‑128 (MQ=255) tttttAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GAT‑‑‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAA‑GAGATCAGCATAAAATTGTGAAATTTa > 2:3084438/1‑128 (MQ=255) tttttAAAAATAAAATTTTAGGAAAATAAGCAAATCAAAAACCTCAATATTAACTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GATATATATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAA‑GCGATCAGCATAAAATGGTGaaa < 1:2927865/128‑1 (MQ=255) ttAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GAT‑‑‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GAAA‑GCGATCAGAATAAAATGGTGAAATTTAGAt > 1:2270540/1‑128 (MQ=255) tAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATTTTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GATATATATATATATATATATATATATATATATAT‑‑‑‑‑‑ACAA‑GCGATCAGCATAAAATGGTGATATTTa > 2:2947682/1‑128 (MQ=255) tAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GATAT‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GAAA‑GATATCAAAATAAAATGGTTAAATTTAGa > 2:1873361/1‑128 (MQ=255) tAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATAA‑‑‑‑‑‑ACTA‑GATATGATAATAAAATTGTGAATTATAGAtgtg > 2:1339030/1‑128 (MQ=255) aaataaatATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GAT‑‑‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAA‑GCGATCATCATAAAATGGTGAAATATAGATCTg > 1:3312391/1‑128 (MQ=255) ataaataTTTTAGGAAATGAAGCAAATCAAATAGATATATATTACCTATAGA‑‑‑GTTT‑‑‑A‑‑T‑‑GTTTT‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAA‑GCGATCAGCATAAAATGGTGAAATTTAGATCTg < 2:1407570/128‑1 (MQ=255) aaataTTTTATTAAATGAATAAAATAAAAAAGATCCATATTTACTATAGA‑‑‑GTTATTTA‑‑TA‑T‑‑‑‑‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAA‑GCGATCAGCATAAAATGGTGAAATTTAGATCTGAg < 2:144513/128‑1 (MQ=255) aaataTTTTAGTAAATGAATCAAATCAAAAACCTCTATATTAACTATAGA‑‑‑GATA‑‑‑A‑‑T‑‑GAT‑‑‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAA‑GCGATCAGCATAAAATGGTGAAATTTAGATCTGAGtt < 2:1062213/128‑1 (MQ=255) aaataTTTTAGGAAATGAAGCAAAGAAAAAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GATAT‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAA‑GCGATCAGCATAAAATGGTGAAATTTAGATCTGAg < 2:1813316/128‑1 (MQ=255) atatTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GAT‑‑‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GTAA‑GCGATCATCATAAAATGGTGAAATTTAGATCTGAGTTgg > 1:1484965/1‑128 (MQ=255) ttttAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GATAT‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAA‑GCGATCAGCATAAAATGGAGAAATTTAGATCTGAGTTGGt > 2:3048138/1‑128 (MQ=255) tttAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GATAT‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAA‑GCGATCAGCATAAAATGGTGATATTTATATCTGAGTTGTTc > 2:148897/1‑128 (MQ=255) tttAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GATAT‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GAAA‑GCGATCAGCATAAAATGGTGATTTATAGATCTGAGTTGGTc > 1:2999285/1‑128 (MQ=255) tattaaaTGAAGCAAAGAAAAAACCTCCATATTAACTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GAT‑‑‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAA‑GCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTaa < 1:17984/124‑1 (MQ=255) atgaaattactcaaagaaaaAAACTCAATATTACATATAGA‑‑‑GTTT‑‑‑C‑‑T‑‑GAT‑‑‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAA‑GCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTaaa < 1:2081049/117‑1 (MQ=255) aGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GAT‑‑‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAA‑GATATCATCATAAAATGGTTAAATTTAGATCTGAGTTTGTCTTata > 2:1954472/1‑126 (MQ=255) aaaTGACTCAAATCAAAAACCTCTATATTAACTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑‑‑‑‑‑‑‑‑‑‑TATATATATATATATATATATATAT‑‑‑‑‑‑GCAA‑GCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGtt < 1:2573431/128‑1 (MQ=255) aTGAAGCAAAGCAAAAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GAAA‑GCGATCAGCATAAAATTGTGAAATTTAGATCTGAGTTGGTCTTAAATTTTTAg > 2:785157/1‑128 (MQ=255) aTGAAGCAAAGCAAAAACCTCCAAAATACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GAT‑‑‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑ACTA‑GATATCAGAATAAAATGGAAAAATTTAAATCAGATTTGGTGATAAATTTGt > 1:1375647/1‑128 (MQ=255) gcaaagaaaaCACCTACATATTATATATAGA‑‑‑GTTA‑‑‑T‑‑T‑‑GAT‑‑‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAA‑GCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGttt < 1:1002922/128‑1 (MQ=255) aaagcaaaAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑G‑‑‑‑‑‑‑‑‑‑‑‑ATATATATATATATATATATAT‑‑‑‑‑‑GCAA‑GCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAg < 2:54409/128‑1 (MQ=255) aagcaaaAACCTCCATATTATCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GATAT‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAA‑GCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGtttt < 1:558069/128‑1 (MQ=255) agcaaaAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑TCAA‑GCGATCAGAATAAAATGGTGAATATTATATCTGATTTTGTATTAAATTTGTATTTtttattt > 2:465514/1‑128 (MQ=255) gcaaaAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATATATATAAGCAA‑GCTATCAGAAAAAACTGGTTATATTTATATATGAGTTTGTCTTATATTTGTtttttt > 1:2956479/1‑128 (MQ=255) caaaAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GATAT‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAA‑GCGATCAGCATAAAATGGTGATATTTAGATCTGAGTTGGTCTTAAATGTGTAGTTtttat > 2:910672/1‑128 (MQ=255) aaaaCCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GATAT‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑TCAA‑GATATCAGCATAAAATTGTGATATATATATCTGAGTTTCTCTTAAATTTGTAGTTtttattt > 2:1021748/1‑128 (MQ=255) aCCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GATAT‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑TCAA‑GCTATCATAAAAAAATGGTTAAATTTATATCTTAGTTGGTGTAAATTTTTTATTTTTTATTtata > 2:2094979/1‑128 (MQ=255) aCCTCCATATTAACTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GATAT‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAA‑GCGATCAGCATAAAATAGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTtata < 2:1528057/128‑1 (MQ=255) cTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GATAT‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAA‑GCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTATTAAATTTGTAGTTTTTATTTATAGt > 1:2371998/1‑128 (MQ=255) tCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GAT‑‑‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GAAA‑GCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTTGTCTTAAATTTGTAGTTTTTATTTATAGTTta > 2:2000277/1‑128 (MQ=255) atatTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GATAT‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAA‑GCGATCAGCATAAAATTGTGAAATTTATATCTGAGTTTGTCTTAAATTTTTAGTTTTTATTTATAGTTtat > 2:645668/1‑128 (MQ=255) atatTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GATAT‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GATA‑GAGATCAGAATAAAATGGTGATATTTAGATCTGAGTGTGTCTGATATTTTTTTTTTTTATTTATATTTtat > 1:1158395/1‑128 (MQ=255) atTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GATAT‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAA‑GCGATCAGCATAAAATTGAGATATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATaa > 1:3791/1‑128 (MQ=255) atTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAA‑GCTATCAGCATAATATTGTTAAATTTATATATGAGTTTTTCTTAAATTTTTATTTTATATTTATAGTTTATAAAGtt > 1:3049212/1‑128 (MQ=255) ttACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GATAT‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAA‑TCGATCAGCATAATATGGTGAGATTTTGATCTGAGTTGGTCTTAATTTTTTAGTGTTTATTTATAGTTTATaaa > 1:2473218/1‑128 (MQ=255) ttACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GATAT‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAA‑GCGATCAGCATAAAATGGTGAAATTTATATATGAGTTGGTCTTAAATTTGTAGTTTTTATATATATTTTATaaa > 2:1595225/1‑128 (MQ=255) ttACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATATATATAAGCAA‑GCGATCAGCATAAAATGTTGAAATATATATCTGAGTTTGTCTTAAATTTTTAGTTTTTATATATATTTtata > 2:1698177/1‑128 (MQ=255) ttACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAA‑GCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGTTCTTAAATTTTTAGTTTTTATTTATAGTTTATATAGTta > 2:744116/1‑128 (MQ=255) tACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GAT‑‑‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GAAA‑GCGATCAGAATAAAATGGTGAACTTTATATCTTATTTGTTCTTAAATTTTTAGTTTTTATTTATAGTTTATAAAGtt > 2:2151344/1‑128 (MQ=255) ga‑‑‑gTTA‑‑‑A‑‑T‑‑GAT‑‑‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAA‑GCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAAttt < 1:31129/128‑1 (MQ=255) attgatatatatatatatatatatatatatatatatat‑‑‑‑‑‑GCAA‑GCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTa < 1:2667635/118‑1 (MQ=255) aatgatatatatatatatatatatatatatatatat‑‑‑‑‑‑GAAA‑GAGATCAGAATAAAATGTTGAAATTTTGATCTGAGTTGGTATTTTATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATTATTTAGa > 2:1730317/9‑128 (MQ=37) ttatatatatatatatatatatatatatatatat‑‑‑‑‑‑GCAA‑GAGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAtt < 1:2621505/122‑1 (MQ=255) tatatatatatatatatatatatatatatatat‑‑‑‑‑‑TAAA‑GAGATAAAAAAAAAATTGTGAAATATATATATGAGTTTGTCATAAATTTGTATTTTTTATTTATATTATATAAATTTTATAATTTATAttt > 1:1196902/6‑128 (MQ=255) gatatatatatatatatatatatatatatatat‑‑‑‑‑‑GCAA‑GCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAttt < 1:1328912/123‑1 (MQ=255) tatatatatatatatatatatatatatatat‑‑‑‑‑‑GCAA‑GCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTTGTGTTAAATTTGTAGTTTATATTTATAGTTGATAAAGTTAATAATTTAGAttttt > 2:2036894/4‑128 (MQ=255) tatatatatatatatatatatatatatatat‑‑‑‑‑‑GCAA‑GCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAttttt < 2:3230835/125‑1 (MQ=255) tatatatataaatatatatatatatatatat‑‑‑‑‑‑GCAA‑GCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAttttt < 1:2176124/125‑1 (MQ=255) atatatatatatatatatatatatatatat‑‑‑‑‑‑GCAA‑GCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTa < 2:2872227/126‑1 (MQ=255) atatatatatatatatatatatatatatat‑‑‑‑‑‑GCAA‑GCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTa > 1:1577356/3‑128 (MQ=255) atatatatatatatatatatatatatatat‑‑‑‑‑‑GAAA‑GCGATCAGAATAAAATTGTGATATATATATCTGAGTTGGTCTTAAATTTTTATTTTTTATTTATAGTTTATAAAGTTAATAATTTATAtttttt > 1:516909/3‑127 (MQ=255) atatatatatatatatatatatatatatat‑‑‑‑‑‑ACAA‑GCGATAAGAATAAAATTGTTAAATTTAGATATGAGTTGGTCTTAAATTTGTAGTTTTTATTTATTTTTTATAAATTTAATAATTTAGATTTTTa > 1:634050/3‑128 (MQ=255) tatatatatatatatatatatatatatat‑‑‑‑‑‑GCAA‑GCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTaa < 2:1631564/127‑1 (MQ=255) atatatatatatatatatatatatatat‑‑‑‑‑‑GCTA‑GCGCTCAGAATAAATTTGTGATATTTATATCTGTGTTTTTCTTAAATTTGTAGTTTTTATATATAGTTTATAAAGTTAATAATTTAGATTTTTTat > 2:699864/1‑128 (MQ=255) atatatatatatatatatatatatat‑‑‑‑‑‑GCAA‑GCGATCAGCATAAAATTGTGATATTTAGATCTGAGTTGGTATTAAATTTTTTGTTTTTATTTATAGTTTATAAAGTTAATTATTTATATTTTtattat > 1:2734648/1‑128 (MQ=255) tatatatatatatatatatatatat‑‑‑‑‑‑GCAA‑GCGATCAGCATAAAATGGTGATATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATAtt > 2:1139636/1‑128 (MQ=255) atatatatatatatatatatat‑‑‑‑‑‑GCAA‑GCGCTCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTGTTAAATTTGTATTTTTTATTTATAGTTTATAAATTTAATAATTTAGATTTTTAATTTTTTa > 1:1621308/1‑128 (MQ=255) atatatatatatatatatatat‑‑‑‑‑‑GCAA‑GCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTTTa < 1:1991163/128‑1 (MQ=255) tatatatatatatatatatat‑‑‑‑‑‑GCAA‑GCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTTTaa < 1:1923196/128‑1 (MQ=255) tatatatatatatatatatat‑‑‑‑‑‑GCAA‑GCGAGCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTTTaa < 1:453481/128‑1 (MQ=255) atatatatatatatatatat‑‑‑‑‑‑GCAA‑GCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTTTaaa < 1:833499/128‑1 (MQ=255) atatatatatatatatatat‑‑‑‑‑‑GCAA‑GCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTTTaaa < 2:2220810/128‑1 (MQ=255) tatatatatatatatatat‑‑‑‑‑‑GCAA‑TCGATCATCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTTTaaaa < 2:2583154/128‑1 (MQ=255) tatatatatatatatatat‑‑‑‑‑‑GCAA‑GCGATCAGCATAAAATGGAGAAATTTATATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATATTTTATAAAGTTAATAATTTAGATTTTTAATATTTTaaaa > 1:717523/1‑128 (MQ=255) atatatatatatatatat‑‑‑‑‑‑GCAA‑GCGATCAGCATAAAATGGTGAAATTTAGAGCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTTTAAAAc < 1:2415258/128‑1 (MQ=255) atatctatatatat‑‑‑‑‑‑GCCA‑GCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTAGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTTTAAAACTTaa < 2:1249459/128‑1 (MQ=255) atatatatatatat‑‑‑‑‑‑GCAA‑GCGATAAGCATAAAATCGTGTAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATTATTTAGATTTTTAATATTTTAAAACTTaa < 2:1375647/128‑1 (MQ=255) tatatatatat‑‑‑‑‑‑GCAA‑GCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTTTAAAACTTAatat < 2:419886/128‑1 (MQ=255) tatatatatat‑‑‑‑‑‑GCAA‑GCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTTTAAAACTTAatat < 1:916575/128‑1 (MQ=255) atat‑‑‑‑‑‑GCAA‑GCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTTTAAAACTTAATATTTTTTaa < 2:3118275/128‑1 (MQ=255) t‑‑‑‑‑‑GCAA‑GCGATCAGCATAAAATGGTGAAATGTAGCTCTGAGGTGGTGTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTTTAAAACTTAATATTTTTTAACAt < 1:3181142/128‑1 (MQ=255) t‑‑‑‑‑‑GCAA‑GAGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTTTAAAACTTAATATTTTTTAACAt < 1:791751/128‑1 (MQ=255) | CATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAA‑GCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTTTAAAACTTAATATTTTTTAACAT > CP016816/437781‑438035 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |