New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 165253 =1224 (0.370)1512 (0.520) 190/218 6.9 61.4% intergenic (+217/‑325) JCVSYN2_00665/JCVSYN2_00670 tRNA N6‑adenosine(37)‑N6‑threonylcarbamoyltransferase complex dimerization subunit TsaB/tRNA‑Ser
?CP016816 = 165249 834 (0.290)intergenic (+213/‑329) JCVSYN2_00665/JCVSYN2_00670 tRNA N6‑adenosine(37)‑N6‑threonylcarbamoyltransferase complex dimerization subunit TsaB/tRNA‑Ser
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 2512 total aligned reads displayed.

ATATTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGAT‑ATTTTTTGTATATG‑CAAATTTTAAAAGAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTTA  >  CP016816/165126‑165380
                                                                                                                                 |                                                                                                                                
  atttatttTAATTATATTATCTCAATTGTATGAAATTTTAAGAAAATAAAACAATTATCTTTTTAGAT‑ATTTTTTGTATATT‑CAAATTTTTAAAAAATTAATTTGAACTTGTTAAAAATAGCtttttt                                                                                                                                <  2:5952567/128‑1 (MQ=255)
   tttatttttattAATTTATCGCACTTGTATTTAATATTAATAAAAAAAAAATATTATCTTTTTATAT‑ATTTTTTTTATATT‑CAAATTTTTAAAAAATTAATTTTAACTTGTAAAAAATAGCttttttt                                                                                                                               <  2:2677550/128‑1 (MQ=255)
   tttAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGAT‑ATTTTTTGTATATG‑CAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGAttttttt                                                                                                                               >  2:783906/1‑128 (MQ=255)
    ttAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGAT‑ATTTTATGTATATG‑CAAATTTTTAAAAAATTAATTTGAAATTGTAAAAAATATCtttttttt                                                                                                                              >  2:3308980/1‑128 (MQ=255)
       gTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGAT‑ATTTTTTGTATATG‑CAAATTTTTAAAAAATTAATTTTAACTTGTAAAAAATAGAttttttttttt                                                                                                                           >  2:1340027/1‑128 (MQ=255)
       gTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGAT‑ATTTTTTGTATATG‑CAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCttttttttttt                                                                                                                           >  2:7173977/1‑128 (MQ=255)
       gTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGAT‑ATTTTTTGTATATG‑CAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCttttttttatt                                                                                                                           >  2:3079275/1‑128 (MQ=255)
        tttCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGAT‑ATTTTTTGTATATG‑CAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATATCtttttttttttt                                                                                                                          >  2:5370585/1‑128 (MQ=255)
         ttatttAATTTTTTGTAATTTTTTGATTTAGTATTTAATTATAAATATTATTTTTTTTTTT‑ATTTTTTGTTTTTG‑AAAATTTTTAAAAAATTAATTTTTAATTTTTAAAAATtttttttttttttttt                                                                                                                         <  1:6366458/124‑1 (MQ=255)
          tCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGAT‑ATTTTTTGTATATG‑CAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCtttttttttttttt                                                                                                                        >  1:4295850/1‑128 (MQ=255)
          tCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGAT‑ATTTTTTGTATATG‑CAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCtttttttttttttt                                                                                                                        >  1:1855165/1‑128 (MQ=255)
          tCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGAT‑ATTTTTTGTATATG‑CAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGAtttttttttttttt                                                                                                                        >  2:3657906/1‑128 (MQ=255)
           cATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGAT‑ATTTTTTGTATATG‑CAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATATCttttttttttttttt                                                                                                                       >  2:687636/1‑128 (MQ=255)
               aaatttttgCAATTTTATTAATTTTTAATTAAATAAAACTATTATTTTTTTATTT‑ATTTTTTGTTTATT‑CAAATTTTTAAAAAATTAATTTTTAATTTTAAAAAATAACtttttttttttttttttat                                                                                                                   <  1:386053/120‑3 (MQ=255)
                 tttATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGAT‑ATTTTTTGTATATG‑CAAATTTTTAAAAAATTAATTTGAACTTGTAAATAATAGCtttttttttttttttaaaaat                                                                                                                 >  2:1747226/1‑122 (MQ=255)
                 tttATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGAT‑ATTTTTTGTATATG‑CAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTATtttttttattttttttat                                                                                                                 >  1:1353496/1‑128 (MQ=255)
                  ttATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGAT‑ATTTTTTGTATATG‑CAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCttttttttttttttttaaaatg                                                                                                                >  2:4480013/1‑122 (MQ=255)
                   tataGCAATTGTATGAATTATTAATAAAATAAAAATATTATATTTTTATAT‑ATTTTTTTTATATG‑AAAATTTTTAAAAAATTAAATTTAACTTTTAAAAAATAGCttttttttttttttttataatgg                                                                                                               <  2:4317860/128‑8 (MQ=255)
                   tATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGAT‑ATTTTTTGTATATG‑CAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCttttttttttttttttataatgt                                                                                                               >  2:1605900/1‑121 (MQ=255)
                   tATCGCAATTGTAAGAATTTTTAATAAAATAAAAATATTATATTTTTATAT‑ATTTTTTGTATATG‑CAAATTTTTAAAAAATTAAATTTAACTTGTAAAAAAAAGCttttttttttttttttataatgg                                                                                                               <  2:5881655/128‑8 (MQ=255)
                      cGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGAT‑ATTTTTTGTATATT‑CAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTATTTTTTTTTtataattaaa                                                                                                            >  2:1895902/1‑122 (MQ=255)
                         aatttttttaaTTAATAAGTAAATATAACTTTTTTTTTTTTAATA‑ATTTTTTTTTAATT‑TAAAATTTTTAAAAATTAATTTTAAATTTTAAAAAAAA‑‑‑‑TGTTTTTTTTTTTTTTTATAATGGAAAt‑ata                                                                                                    <  2:4728421/119‑1 (MQ=255)
                             gTATGAATTATTAAGTAACAAAAAATATTATCTTTTTATTT‑ATTTTTTGTTTATT‑CAAATTTTTAAAAAATTAATTTGAAATTTTTAAAAATA‑‑‑‑TATTTTTTTTTTTTTTTATAATGGAAAT‑ATAAAtt                                                                                                <  1:156092/128‑1 (MQ=255)
                             gTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGAT‑ATTTTTTGTATATG‑CAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTA‑AATTGAAAT‑ATaa                                                                                                   >  2:6261053/1‑128 (MQ=255)
                              tATGAATTATTAATAAACTAAAAATATTATCTTTTTAGAT‑ATTTTTTTTATATG‑CAAATTTTTAAAAAATTAATTTTAAATTGTAAAAAATA‑‑‑TCTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAAtt                                                                                                <  1:5986541/128‑1 (MQ=255)
                              tATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGAT‑ATTTTTTGTATATG‑CAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTATTATTTTTTTTtataatataaatataaatttt                                                                                                    >  2:197733/1‑117 (MQ=255)
                               tttaaTTATTAATAAATAAAAAATATTATTTTTTTTTAT‑ATTTTTTGTTTATT‑CAAATTTTTAAAAAATTAATTTTAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAAtt                                                                                                <  2:5758493/125‑1 (MQ=255)
                               aTGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGAT‑ATTTTTTGTATATG‑CAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATTTAAAT‑ATAAAttt                                                                                               >  2:6548251/1‑128 (MQ=255)
                                tGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGAT‑ATTTTTTGTATATG‑CAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGAAATT‑AAAAAttt                                                                                               >  1:3127061/1‑128 (MQ=255)
                                  aaTTATTAATAAAATAAAAATATTATATTTTTATAT‑ATTTTTTTTATATT‑CAAATTTTTAAAAAATTAATTTTAAATTTTAAAAAATA‑‑‑‑TCTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAgg                                                                                           <  1:3410394/128‑1 (MQ=255)
                                   aTTAGTAAGAAACTAAAACTATTATCTTTTTAGAT‑ATTTTTTGTATATG‑CAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGTAAAA‑TAAAATTTTAg                                                                                            >  1:757269/1‑128 (MQ=255)
                                    ttttttataaaataaaacttATATTATTTAAAAT‑ATTTTTTTTAAATGAAAAATTTTAAAAAAAAATTTTTTTATTTTTAAAAAA‑AGC‑‑‑TTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGt                                                                                          <  1:4710335/120‑1 (MQ=255)
                                     tAGTAAGAAACTAAAACTATTATCTTTTTAGAT‑ATTTTTTGTATATG‑CAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATATTGTAAAT‑ATAAATTTTAGTTa                                                                                         >  1:6233838/1‑128 (MQ=255)
                                     tAGTAAGAAACTAAAACTATTATCTTTTTAGAT‑ATTTTTTGTATATG‑CAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATTTAAAT‑ATAAATTTTattta                                                                                         >  2:4823671/1‑124 (MQ=255)
                                      aGTAAGAAACTAAAACTATTATCTTTTTAGAT‑ATTTTTTGTATATG‑CAAATTTTTAAAAAATTGATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATGTAAAT‑ATAAATTTTatttat                                                                                        >  2:4984796/1‑123 (MQ=255)
                                      aGTAAGAAACTAAAACTATTATCTTTTTAGAT‑ATTTTTTGTATATG‑CAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATTATTGAAAT‑ATAAAttttttttt                                                                                         >  1:6647080/1‑123 (MQ=255)
                                      aGTAAGAAACTAAAACTATTATCTTTTTAGAT‑ATTTTTTGTATATG‑CAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAG‑‑ATTTTTTTTTTTTTTTTTAAAATTAAAAT‑ATAAATTTTAGTTa                                                                                         >  1:6522853/1‑128 (MQ=255)
                                        taataaAATAAAAATATTATCTTTTTATAT‑ATTTTTTGTTTATG‑CAAATTTTTAAAAAATTAATTTGAAATTTTAAAAAATA‑‑‑TCTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTAttt                                                                                      <  1:7041668/128‑1 (MQ=255)
                                         aaGAAACTAAAACTATTATCTTTTTAGAT‑ATTTTTTGTATATG‑CAAATTTTTAAAAATTTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTATATTAAAAAT‑‑TAAATTTTAAGTAtt                                                                                       >  1:3534274/1‑128 (MQ=255)
                                         aaGAAACTAAAACTATTATCTTTTTAGAT‑ATTTTTTGTATATG‑CAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATTTAAAT‑ATAAATTTTATTTAtttt                                                                                     >  2:2369297/1‑128 (MQ=255)
                                         aaGAAACTAAAACTATTATCTTTTTAGAT‑ATTTTTTGTATATG‑CAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATGTAAAT‑ATAAATTTTTTGtttttt                                                                                     >  1:235982/1‑128 (MQ=255)
                                         aaGAAACTAAAACTATTATCTTTTTAGAT‑ATTTTTTGTATATG‑CAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑‑TTTTTTTTTTTTTTATAATTGAAAT‑ATAAATTTTATATAtttttt                                                                                   >  2:5296289/1‑126 (MQ=255)
                                         aaGAAACTAAAACTATTATCTTTTTAGAT‑ATTTTTTGTATATG‑CAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑‑‑‑‑TCTTTTTTTTTTTTTTATAATTTAAAT‑ATAAATTTTATTTAtttttt                                                                                   >  2:1208068/1‑126 (MQ=255)
                                                taaaactaTTATCTTTTTAGAT‑ATTTTTTGTATATG‑CAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATATCTTTTTTTTTTTATTTTT‑‑‑TAATTTAAAA‑AAAAATTTTAGTTATttttttttaa                                                                              >  1:2086937/1‑124 (MQ=255)
                                                taaaaattTTTTATTTTTATTT‑ATTTTTTTTATATT‑TAAATTTTTAAAAAATTAATTTTTACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCTa                                                                             <  1:3974059/128‑1 (MQ=255)
                                                aaaaacaaATATTTTTTTATAA‑ATTTTTTGTATATT‑GAAATTTTTAAAAAATTAAATTTAAATTGTAAAAAATTGC‑‑‑‑TTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCTa                                                                             <  2:6668023/127‑1 (MQ=255)
                                                  aaagaattttattttttTAT‑TTTTTTTGTATATT‑TAAATTTTTAAAATATTTATTTTAAATTTTAAAATATAG‑‑‑‑ATTTTTTTTTTTTTATATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCTAAg                                                                           <  1:3718835/117‑1 (MQ=255)
                                                    acaattatATTTTTTTAT‑ATTTTTTTTTTATT‑AAAATTTTTAAAAAATTAATTTTTAATTTTAAAAAATATC‑TTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCTaa                                                                            <  1:914253/125‑1 (MQ=255)
                                                     ctaTTATCTTTTTAGAT‑ATTTTTTGTATATG‑CAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑GTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGTTATTTTTTTGTATAATTa                                                                         >  1:5863517/1‑128 (MQ=255)
                                                      ttttttttttttttat‑attttttttatatT‑CAAATTTTTAAAAAATTAATTTGAAATTTTAAAAAATA‑‑‑TCTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCTAAGTAt                                                                        <  1:4821955/121‑1 (MQ=255)
                                                      tattatCTTTTTAGAT‑ATTTTTTGTATATG‑CAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATGTAAAT‑ATAAATTTTAGTTATTTTTTTTTATaatt                                                                          >  2:6074430/1‑126 (MQ=255)
                                                       tttttatttttATATAATTTTTTTTATTTT‑AAATTTTTAAAAAAATTAATTTTAA‑TTTTAAAAAAT‑‑‑TTTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCTAAGTATc                                                                       <  2:3213358/122‑1 (MQ=255)
                                                       attattTTTTTATAT‑ATTTTTTGTATATG‑CAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCTAAGTATCt                                                                      <  1:7143557/128‑1 (MQ=255)
                                                       attatCTTTTTAGAT‑ATTTTTTGTATATG‑CAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTATAAGTaaa                                                                       >  2:4029505/1‑126 (MQ=255)
                                                         tatCTTTTTAGAT‑ATTTTTTGTATATG‑CAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTATTAT‑‑TGAAAAA‑ATAAATTTTAGTAATTTTTTTTTATAATTAtaaa                                                                     >  2:5622252/1‑125 (MQ=255)
                                                          atCTTTTTAGAT‑ATTTTTTGTATATG‑CAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTAATAATTTAAAT‑ATAAATTTAATATATTTTTTTTTATAATTAtat                                                                      >  2:3752228/1‑126 (MQ=255)
                                                              ttttATAT‑TTTTTTTTTTTATG‑TAAATTTTTAAAAATTTAATTTTAATTTTTAAAAAATA‑‑‑‑TTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTATAAGTATCTaaaaaaa                                                               <  1:5131012/128‑1 (MQ=255)
                                                              ttttAGAT‑ATTTTTTGTATATG‑CAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTT‑‑TAATGTAAAT‑ATAAATTTTAGTTTTTTTGTTGTATAAGTTTATaaaaa                                                                 >  2:900303/1‑128 (MQ=255)
                                                                ttAGAT‑ATTTTTTGTATATG‑CAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATGTAAAT‑ATAAATTTTAGGTATTTTTTTTTATATGTATATaaaaaatt                                                              >  2:2106206/1‑126 (MQ=255)
                                                                 tAGAT‑ATTTTTTGTATATG‑CAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTATAATTGAAAA‑ATAAATTTTATTTTTTTTTTTTTCTAATTATATaaaaaa                                                                >  1:6913373/1‑128 (MQ=255)
                                                                 tAGAT‑ATTTTTTGTATATG‑CAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATTAAAAT‑AAAAATTTTAGTTATTTTTTTATAAAAGTATAaaaaaaaaaa                                                             >  1:2976031/1‑126 (MQ=255)
                                                                  ttat‑atTTTTTTTATATG‑CAAATTTTTTAAAAATTAATTTTAACTTTTAAAAAATA‑‑‑‑TTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGa                                                           <  2:2241327/126‑1 (MQ=255)
                                                                  ttat‑atTTTTTGTATATT‑CAAATTTTTAAAAAATTAATTTGAACTTTTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAg                                                            <  2:3497986/126‑1 (MQ=255)
                                                                     t‑atTTTTTTTATATT‑TAAATTTTTTAAAAATTATTTTTAATTTTTAAAAAATTG‑TTTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGa                                                           <  1:6757224/128‑1 (MQ=255)
                                                                     t‑atTTTTTGTATATG‑CAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGTTATTTTTTTGTCTAATTATATAAAAAAATAGaaa                                                         >  1:2835965/1‑128 (MQ=255)
                                                                            ttGTATATG‑CAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTAATAATGAAAAT‑ATAAATTTTAGTTTTTTTTTTATCTAAGTATTTAAAAAAAAATAATGGaaaaa                                                  >  2:3890704/1‑128 (MQ=255)
                                                                             ttttttatttaaaTTTTTAAAAAATTAATTTTTAATTTTAAAAAATA‑‑‑TTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGaaaa                                                   <  1:4392469/118‑1 (MQ=255)
                                                                             tGTATATG‑CAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATGTAAAT‑ATAAATTTTATGTATTTTTTTTTATAATTATATAAAAAAATaaaatatgaata                                                  >  1:4126751/1‑120 (MQ=255)
                                                                                 tatG‑AAAATTTTTAAAAAATTAATTTTAAATTTTAAAAAATAGC‑TTTTTTTTTTTTTATTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAat                                                <  1:1969295/128‑1 (MQ=255)
                                                                                   tttaaatttttTAAAAAATTATTTTTAAATTTTAAAAAAT‑‑‑TCTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATAtt                                             <  1:1703934/121‑1 (MQ=255)
                                                                                   tG‑CAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATTGAAAT‑ATATATTTTAGGTTTTTTTTTTTATAAGTATCTAAAAAAATATAAAGGAAAAAATAtt                                             >  2:6400921/1‑128 (MQ=255)
                                                                                   tG‑CAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATTTAAAT‑ATAAATTTTAGTTATTTTTTTTTATAATTATATAAAAAAATATAAATTAAAAAATAttt                                            >  2:110023/1‑127 (MQ=255)
                                                                                      cAATTTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATGTAAAT‑ATAAATTTTATTTATTTTTTTGTATAATTATATAAAAAAATAAAAAGAAAAAAATATTGtt                                          >  1:6090592/1‑128 (MQ=255)
                                                                                       aaaTTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTATT‑T‑‑TTTAAAT‑ATAAATTTTAGGTTTTTTTTTGTATAATTATAAAAAAAAATAAAAAGGAAAAAATATTTTTa                                         >  1:1149362/1‑128 (MQ=255)
                                                                                              taaaaaaTTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATTAAAAT‑ATAAATTTTATGTATTTTGTTTTATAATTATAAAAAAAAAAAAAAAGTAAAAAATATTTTTaaaattta                                  >  2:4643890/2‑124 (MQ=255)
                                                                                               aaaaaaTTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATTTAAAT‑ATAAATTTTAGTTATTTTTTTTTAAATTTATAAAAAAAAAAAAAAAGAAAAAAATATTTTTAAAATTaaa                                 >  1:2199968/1‑127 (MQ=255)
                                                                                               aaaaaaTTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATGTAAAT‑ATAATTTTTAGTTATTTTTTTTTATAAGTATATAAAAAAATAAAAAGTAAAAAAAATTTTTAAAATTaaa                                 >  1:4992682/1‑127 (MQ=255)
                                                                                                aaaaattaattTGTACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATa                                <  2:708977/125‑1 (MQ=255)
                                                                                                  aaattaattTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAATTTTTATGTATTTTTTTTTATTAGTATATAAAAAATTATAAAGAAAAAAATTTTTTTAAAATAAATAc                               >  2:5143067/2‑128 (MQ=255)
                                                                                                  aaaataattTTATATTTTAAAAAATA‑TTTTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATa                                <  1:2727507/124‑1 (MQ=255)
                                                                                                   aattaattTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTATATTTGAAAT‑TTAAATTTTTTGTATTTTTTTGTTTTATTTTTTTAAAAAATTTAATTGAAAAATTTTTTTTAAATTTAATataaa                            >  2:2972126/1‑124 (MQ=255)
                                                                                                    attaattTGTTATTGTAAAAAATA‑‑TATTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTa                             <  2:2511373/128‑1 (MQ=255)
                                                                                                    attaattTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTATAAGTTAATAAAAAAATAGAAAGTAAAAATTATTGTTAAAAGTAATACTaa                            >  2:4172343/1‑128 (MQ=255)
                                                                                                     ttaattTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATGTAAAT‑AAAAATTTTAGTTATTTTTTTTTATAATTATATAAAAAAATATAAATGAAAAAATATTTTTaaatttatatcgt                             >  1:5432396/1‑118 (MQ=255)
                                                                                                     ttaattTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTAT‑‑TTGAAAT‑ATAAATTTTTGTTATTTTGTTGTATAAGTTTATAAAAAAATATAAAGTAAAAAAATTTTTTAAAATTAAAAATaaa                           >  1:4559783/1‑128 (MQ=255)
                                                                                                     ttaattTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATGTAAAT‑ATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAATTAGATAGGAAAAAATTTTGTTAAAAGTAATACTaaa                           >  2:5502896/1‑128 (MQ=255)
                                                                                                     ttaattTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTATGTTTTTTTTTGTATAATTATATAAAAAAATATAAAGTAAAAAATATTTTTAAAAGTAATAATaaa                           >  2:3395211/1‑128 (MQ=255)
                                                                                                             aaCTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTATATTGTAAAT‑ATAAATTTTAGGTATTTTGTTGTATAAGTTTATAAAAAATTAGAATGTAAAAAATATTGTTATAAGTAATAATAAAATTATTaaa                  >  2:2787458/1‑128 (MQ=255)
                                                                                                              aCTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTA‑AAAGGAAATAAAAAATTTTAGGTATTTTGTTTTCTAATTATCAAAAAAAATAAAAAGCAAAAAATATTTTAAAAAGAAAAACTAAAATAATTTAAt                 >  1:3257797/1‑128 (MQ=255)
                                                                                                                 tGTAAAAAATAGC‑‑‑TTTTTTTTTTTATTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTa                   <  2:146288/124‑1 (MQ=255)
                                                                                                                  ttttttaataattttttttttttttttttttATAATGGAATT‑ATAAATTTTAGGTATTTTGTTGTATAAGTATCTAATAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAAt                 <  1:5292633/116‑1 (MQ=255)
                                                                                                                       aataatttttttttttttttttttttATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGttaa            <  1:1005385/121‑1 (MQ=255)
                                                                                                                        aaaaatagcttttttttttttttttATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGttaat           <  2:6156454/119‑1 (MQ=255)
                                                                                                                          attttttttttttttttttttttATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGttaatta         <  2:6768818/124‑1 (MQ=255)
                                                                                                                           aatagcttttttttttttttttATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCTAAGTATATAAAAAAATAGAAATGAAAAAATATTTTTAAAAATAATAATATAATTAATTAATTttaattaa        >  2:2862541/7‑128 (MQ=255)
                                                                                                                            tagctttttttttttttttttATAATGGAATT‑ATAATTTTTTGGTATTTTGTTGTATATGTTTATAAAAAAATATAAAGTAAAAAATATTGTTAAAATTAAAAATAAAATTATTTAATttaaattaaa       >  2:696388/5‑128 (MQ=255)
                                                                                                                             tagcttttttttttttttttATAATGGAAAT‑ATAAATTTTAGGTATTTTTTTGACTAAGTAACTAAAAAAATAAAAAGTAAAAAATATTTTTAAAATTAAAACTAAAATTATTAAATTTTAATAaaaa      >  1:5707737/5‑128 (MQ=255)
                                                                                                                             aaattttttttttttttttttTAATTGAAAT‑ATAAATTTTATGTATTTTGTTTTCTAATTTTATAAAAAAATATTAATGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTaaaa      <  1:1464030/125‑1 (MQ=255)
                                                                                                                                tttttttttttttttttATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAATAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACtt   <  1:557036/128‑1 (MQ=255)
                                                                                                                                cttttttttttttttatATAATGGAAAT‑ATAAATTTTAGGTATTTTTTTGTATAAGTAAATAAAAAAATAAAAAGGAAAAAATATTGTTAAAATAAATAATAAAATTTTTTAATTTTAATAAAAAAtt   >  1:258231/2‑128 (MQ=255)
                                                                                                                                 |                                                                                                                                
ATATTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGAT‑ATTTTTTGTATATG‑CAAATTTTAAAAGAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTATAATGGAAAT‑ATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTTA  >  CP016816/165126‑165380

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.