New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 165253 =2161 (0.690)411 (0.150) 114/218 34.9 18.5% intergenic (+217/‑325) JCVSYN2_00665/JCVSYN2_00670 tRNA N6‑adenosine(37)‑N6‑threonylcarbamoyltransferase complex dimerization subunit TsaB/tRNA‑Ser
?CP016816 = 165249 1733 (0.630)intergenic (+213/‑329) JCVSYN2_00665/JCVSYN2_00670 tRNA N6‑adenosine(37)‑N6‑threonylcarbamoyltransferase complex dimerization subunit TsaB/tRNA‑Ser
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 2525 total aligned reads displayed.

ATATTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATATGC‑AAATTTTAAAAGAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTTAA  >  CP016816/165126‑165381
                                                                                                                                 |                                                                                                                                
atatTTAGTTTTAATAATTTATCGCTATTGTATTAATTAGTAAGAAACTAAAAATATTTTATTTTTAGATA‑TTTTTTTTATATGC‑AAATTTTTAAAAAAATAAATTGAAATTGTTAAAAAAAGCcttt                                                                                                                                  <  2:3470076/128‑1 (MQ=255)
 tatTTAGTTTTATTAATTTTTTTCACTTGTATGAATTTGTAAGAAACTAAAAATTTTATCTTTTTAGTTA‑TTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTTTAAAAAATACCttttt                                                                                                                                 <  2:1932110/128‑1 (MQ=255)
   tttAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCttttttt                                                                                                                               >  1:3654214/1‑128 (MQ=255)
    ttAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCtttttttt                                                                                                                              >  2:6814070/1‑128 (MQ=255)
     tAGTTTCATTAATTTATCTCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATT‑TTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCtattttttt                                                                                                                             >  2:5487580/1‑128 (MQ=255)
        tttCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCtttttttttttt                                                                                                                          >  2:4581354/1‑128 (MQ=255)
        tttCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCtttttttttttt                                                                                                                          >  1:4888891/1‑128 (MQ=255)
          tCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATATCattttttttttttt                                                                                                                        >  2:3617308/1‑128 (MQ=255)
          tCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCttattttttttttt                                                                                                                        >  2:3797270/1‑128 (MQ=255)
            aTTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTATATA‑TTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCtttttttttttttttt                                                                                                                      >  2:2026006/1‑128 (MQ=255)
                 tttATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCttttttttttatttttataaa                                                                                                                 >  1:2219079/1‑123 (MQ=255)
                  ttATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCttttttttttttttttaaaaat                                                                                                                >  1:2818697/1‑122 (MQ=255)
                  ttATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTtataat                                                                                                                >  1:877039/1‑126 (MQ=255)
                   tATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAAt                                                                                                              >  2:1486048/1‑128 (MQ=255)
                     tCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCttttatttttttttttttaaaatta                                                                                                             >  1:4740485/1‑121 (MQ=255)
                        cACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTtttattaata                                                                                                          >  2:5700347/1‑122 (MQ=255)
                          cTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATATTA‑AAATTTTTAAAAAATTAATTTGAACTTTTAAAAAATATCttttttttttttttttttatattttaatta                                                                                                        >  2:6621095/1‑116 (MQ=255)
                          cTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTTTAAATATTAGATTTTTTATTTTTTTTTTTaatttaaaataa                                                                                                        >  1:330912/1‑119 (MQ=255)
                          cTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTtataatgtaaaaat                                                                                                        >  1:1968940/1‑118 (MQ=255)
                           ttGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTTTaaaatgtaaa                                                                                                       >  1:3833102/1‑120 (MQ=255)
                           ttGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTT‑TAATGAAAatat                                                                                                      >  2:5130334/1‑128 (MQ=255)
                           ttGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATGGAAattt                                                                                                      >  2:5569760/1‑126 (MQ=255)
                            tGTATGAATTATTAATAAAATAAAACTATTATCTTTTTATATA‑TTTTTTTTAAATTC‑AAATTTTTAAAAAATTAATTTTAACTTGTAAAAAA‑AACCTTTTTTTTTTTTTTTTTTATAATGGAAAtata                                                                                                     <  2:4188033/128‑1 (MQ=255)
                            tGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTAAAATTTAAAtata                                                                                                     >  1:6369642/1‑128 (MQ=255)
                             gTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCttttttttttt                                                                                                                           >  2:5264638/1‑106 (MQ=255)
                              tattaattattaatAAAATAAAAATAATTTATTTTTATTTA‑ATTTTTTTTTTTTA‑AAATTTTTAAAAAATTTATTTTAAATTGTAAAAAATATC‑TTTTTTTTTTTTTTTTTTATAATGGAAATATaaa                                                                                                   <  1:2690767/128‑1 (MQ=255)
                              tATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGTAAAAAAAAAt                                                                                                  >  2:1787405/1‑128 (MQ=255)
                               attaaTTATTAATTAAATTAAAATATTTTTTTTTTTTATT‑TTTTTTTTTTATTCTAATTTTTAAAAAATTTAATTTTAA‑TTTTAAAAAATA‑‑TCTTTTTTTTTTTTTTTTTATAATGGAAATATAAAtt                                                                                                 <  1:6825795/125‑1 (MQ=255)
                                ttcgtttattataaaataaaaaaaTTTTTTTTTTTTTTA‑TTTTTTTTTTATTC‑AAATTTTTTAAAAATTAATTTTTAATTTTTAAAAAT‑TTTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAAtt                                                                                                 <  2:3251221/116‑1 (MQ=255)
                                 gAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTa                                                                                              >  1:541920/1‑128 (MQ=255)
                                   atttttaataaAATAAAAATATTTTTTTTTTATTTA‑TTTTTTTTATTTTT‑AAATTTTTAAAAAATTAATTTTAAATTTTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAg                                                                                             <  2:6494415/123‑1 (MQ=255)
                                   aTTAGTAAGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTT‑TATTTTAAATATAAATTTTa                                                                                              >  1:6113918/1‑128 (MQ=255)
                                     tatttaGAAACTAAAACTATTTTCTTTTTATTTT‑TTTTTTTTTATTTT‑AAATTTTTAAATAATAAAATTTATATTTTTAAAAATA‑‑TATTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGt                                                                                           <  1:5020771/123‑1 (MQ=255)
                                     tAGTAAGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTAATAATGTAAATAAAAATTTTat                                                                                             >  2:3361584/1‑127 (MQ=255)
                                     atttaataatataaaacttATTTTTTTTTATTTATTTTTTTTTATTTAA‑AATTTTTTAAAATATAAATTT‑AAATTTTTAAAAATATTATTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAg                                                                                             <  2:4449324/117‑1 (MQ=255)
                                      attaataaACTAAAAATAATATTTTTTATGATA‑TTTTTTTTTTATTA‑AAATTTTTAAAAAATTAAATAGAAATTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTa                                                                                          <  1:6486040/126‑1 (MQ=255)
                                      aGTAAGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATTGAAATAAAAATTTTattt                                                                                           >  1:6215958/1‑125 (MQ=255)
                                       ttaataaAATAAAAATATTTATTTTTTATTTA‑TTTTTTGTTTTTTA‑AAATTTTTAAAAAATTAATTTTTAATTTTAAAAAAAA‑‑TCTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTAt                                                                                         <  1:1128138/127‑1 (MQ=255)
                                       gttataaaattaaaataTTTTTTTTTTTTTTA‑TTTTTTTTTTATGC‑AAATTTTTAAAAAATTAATTTTAAATTTTAAAAAATA‑‑TATTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTAt                                                                                         <  2:5387139/117‑1 (MQ=255)
                                         aaGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTATAATTTAAATATAAATTTTataaaa                                                                                         >  1:2089518/1‑123 (MQ=255)
                                         aaGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTT‑‑‑TAATGGAAATATAAATTTTAGGTAtttt                                                                                      >  1:5327966/1‑128 (MQ=255)
                                         aaGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATTTAAATATAAATTTTAGGTAttt                                                                                       >  1:5628469/1‑128 (MQ=255)
                                              actaaaactaTTATCTTTTTAGATA‑TTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATTTAAATATAAATTTTAGTTATtttttt                                                                                   >  1:750810/1‑128 (MQ=255)
                                               ctaaaactaTTATCTTTTTAGATA‑TTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTTTATTTTAAATATAAATTTTattttttttttg                                                                                   >  2:4338937/1‑117 (MQ=255)
                                               ctaaaactaTTATCTTTTTAGATA‑TTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTATTTATTTTAAT‑AT‑‑AAATATAAATTTTATTTATttttttttg                                                                                >  1:1659818/1‑125 (MQ=255)
                                               ctaaaactaTTATCTTTTTAGATA‑TTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATTGAAATATAAAATTTATGTAttttttggt                                                                                 >  1:4492804/1‑123 (MQ=255)
                                                taaaactaTTATCTTTTTAGATA‑TTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATGGAATTATAAATTTTATGTttttttttta                                                                                 >  2:4043430/1‑126 (MQ=255)
                                                taaaactaTTATCTTTTTAGATA‑TTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑‑‑TTTTTTTTTTTTTATAATGTAAATATAAATTTTAGTTATTTTTTTGTATaat                                                                            >  2:3103870/1‑127 (MQ=255)
                                                       attatCTTTTTAGATA‑TTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTTTATAAGtta                                                                         >  1:1517624/1‑126 (MQ=255)
                                                        ttatTTTTTTATATA‑TTTTTTTTATATGC‑AAATTTTTAAAAAATTAAATTTAAATTTTAAAAAATAG‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTAt                                                                         <  1:3925475/128‑1 (MQ=255)
                                                        ttatATTTTTTTTTA‑TTTTTTTTATATTC‑AAATTTTTAAAAAATTTATTTTGACTTGTTAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTAt                                                                         <  1:3433840/128‑1 (MQ=255)
                                                         tatCTTTTTAGATA‑TTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGTTTTTTTTTTTTATaatttac                                                                        >  2:2137670/1‑123 (MQ=255)
                                                          atCTTTTTAGATA‑TTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTTGGTATTTTTTTGTCTAAGtatata                                                                      >  2:6007984/1‑128 (MQ=255)
                                                             ttttttttta‑tTTTTTTTTTATTA‑AAATTTTTTAAAAATTAATTTTAAATTTTAAAAAAT‑TTATTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTaaa                                                                    <  1:3742147/120‑1 (MQ=255)
                                                              ttttAGATA‑TTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTT‑TAATGAAAATATAAATTTTAGTTATTTTTTTTTATAAGttaataaaa                                                                   >  2:1228464/1‑120 (MQ=255)
                                                              ttttAGATA‑TTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATTTAAATAAAAATTTTATTAATTTTTTTTTATAATTATATaaaa                                                                   >  1:1001558/1‑128 (MQ=255)
                                                              ttttAGATA‑TTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATGTAAAAATAAATTTTATTTATTTTTTTTTATAATTATATaaaaaa                                                                 >  1:6008369/1‑128 (MQ=255)
                                                              ttttAGATA‑TTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAG‑ATTTTTTTTTTTTTTTTTTATAATTTAAATAAAAATTTTATTTATTTTTTTATATAATTATaaaaaa                                                                   >  1:1423437/1‑128 (MQ=255)
                                                                 tAGATA‑TTTTTTGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATGTAAATTTAAATTTTTGGTATTTTTTTGTATAAGTAAATaaaaaaa                                                                >  1:1338649/1‑128 (MQ=255)
                                                                         ttttttTATATTC‑AAATTTTTTAAAAATTAATTTTAAATTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAg                                                         <  2:5069226/128‑1 (MQ=255)
                                                                         tttttGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATTTAAATATAAATTTTTGTTATTTTTTTGTATAATTATATAAAAAAATAAAAAgt                                                        >  2:2256055/1‑127 (MQ=255)
                                                                           ttttttttttttaaaTTTTTAAAAAATTTATTTTAAATTTTTAAAAATTTTTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAg                                                         <  2:6350705/116‑1 (MQ=255)
                                                                            ttGTATATGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTTAAATTAAAAAAAAATTTTTATTTTTTTTGTTTTATATTTAAATaaaaaataaaaaataa                                                       >  2:875602/1‑118 (MQ=255)
                                                                             tttaaattc‑AAATTTTTAAAAAATTAATTTGTAATTTTAAAAAATATC‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGaaa                                                     <  2:1386008/120‑1 (MQ=255)
                                                                                  atGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATGTAAATAAAAATTTTATTTATTTTTTTTTATAATTATATAAAAAATTATAAAGTaaaaaaat                                                >  1:1239471/1‑126 (MQ=255)
                                                                                   tGC‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTAAAATTTAAAAATAAATTTAAGTTATTTTTTTTTATAAGTTAATAAAAAAATAAAAATAAAAAAatat                                               >  1:3543935/1‑128 (MQ=255)
                                                                                   atttaaaTTTTTAAAAAATTTATTTTATATTGTAAAAAATA‑TTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAata                                                <  1:3180785/124‑1 (MQ=255)
                                                                                     c‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTAGTTTTTTTGTTGTGAAATTATCTAAAAAAATAAAAAGGAAAAAATAtt                                              >  2:737931/1‑128 (MQ=255)
                                                                                     c‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGTTTTTTTTTTTTATAATTATATAAAAAAATATAAAGTAAAAAATAttt                                             >  1:5863847/1‑127 (MQ=255)
                                                                                     c‑AAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTATTTTAAAAAAGGAAAATTAAATTTACTATTTTTTGTTGGAATAGTATATAAAAAAAAAGAAAGGAAAAAATATTg                                             >  2:2338402/1‑128 (MQ=255)
                                                                                      taaaTTTTTTAAAAATTAATTTTATTTTTTAATAAATA‑TTTTTTTTTTTTTTTTTTTTATAATTTAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTg                                             <  1:4617782/127‑1 (MQ=255)
                                                                                       aaaTTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTATAATTTAAAAAAAAATTTTATGTATTTTTTTTTAAAAATATAAAAAAAAATAAAAATTAAAAAAAAttt                                             >  2:5852772/1‑127 (MQ=255)
                                                                                        aaTTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATTTAAATATAAATTTTAGTTATTTTGTTGTATAAGTATATAAAAAAATAGAATGTAAAAAATtttttt                                           >  1:573273/1‑128 (MQ=255)
                                                                                         aTTTTTAAAAAATTAATTTTAAATTTTAAAAAAAATC‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTa                                          <  2:611131/128‑1 (MQ=255)
                                                                                          tttttataaaattaattTTAA‑TTTTAAAAAATA‑TTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTaaa                                        <  2:2565255/119‑1 (MQ=255)
                                                                                            ttttatatatttatttTAAATTGTTATAAATATC‑TTTTTTTTTTTTTTTTTTATAATGGATATATAAATTTTAGGTATTTTGTTGTATAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTaaaa                                       <  2:1050254/120‑1 (MQ=255)
                                                                                              taaaaaaTTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTAAAAAAT‑TAAATAAAAATTTTATTTATTTTATTTAAAAATTAAATAAAAAATAAAAAAATAAAAAATATTTATaaaaat                                     >  2:4854657/2‑126 (MQ=255)
                                                                                              taaaaaaTTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGTTATTTTTTTTTATAATTATATAAAAAAATATAAAGTAAAAATTATTTTTAAAATTaa                                   >  1:2460325/2‑128 (MQ=255)
                                                                                               aaaaaaTTAATTTTAAATTTTAAAAAATA‑TTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTa                                    <  2:6215958/128‑1 (MQ=255)
                                                                                               aaaaaaTTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTTTAATTGAAATATAAATTTTAGGTTTTTTTTTGTATAATTTTTAAAAAAAATATAAAGTAAAAAATATTTTTaaaatt                                     >  1:6713759/1‑126 (MQ=255)
                                                                                                 aaaattaattTGAACTTGTAAAAAATAGATTTTTTTTTTTTTTTTTTT‑TAATGAAAAAAAAAATTTTATTTATTTTTTTTTAAAATTAAATAAAAAAAAATAAAGAAAAAAATATTTTAAAAATTAAt                                  >  2:4736216/3‑128 (MQ=255)
                                                                                                   aattaattTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAATTTTTAGGTATTTTGTTGTGTATGTTTCTTAAAAAATATAAAGATAAAAATATTTTTAAAGGTAATACt                               >  1:2583080/1‑128 (MQ=255)
                                                                                                   aattaattTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTAAAAAGAATAAAAAAATTTAAGTTATTTTTTTTTAAAATTATAAAAAAAAATATAAAGGAAAAAATATTTTTAAaataaataat                               >  1:4172381/1‑126 (MQ=255)
                                                                                                     ttaattTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTAGGTTTTTTGTTTTAAAATTATATAAAAAAATAGAATTGAAAAAAAATTTTTAAAATTAAAAATaa                             >  2:243445/1‑128 (MQ=255)
                                                                                                      taattTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTT‑TAATGAAAAAAAAAATTTTTGTTATTTTTTTGTATAATATTAAAAAAAAATAAAAAGAAAAAAATTTTTTTAAAAGAAAAAATaa                             >  2:6713860/1‑128 (MQ=255)
                                                                                                        attttcaaatttAAAAAATATC‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAat                          <  2:1627825/117‑1 (MQ=255)
                                                                                                         tttGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATGTAAATTTAATTTTTTTGTATTTTGTTTTATAATTATATAAAAAAATATAAAGTAAAAAATATTTTTAAAATTAATAATAAAat                          >  1:1746345/1‑128 (MQ=255)
                                                                                                              aCTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTA‑AATGGAAATATAAATTTTATGTATTTTGTTTTCTAATTAAATTAAAAAATATAAAGGAAAAAATATTTTTAAAATTAATAATAAAATAAttt                     >  1:1843596/1‑128 (MQ=255)
                                                                                                              aCTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATTTAAAAAAAAATTTAAGTTATTTTTTTGTAAAATTAAAAAAAAAAATATAAAGTAAAAAATATTATTAAAATTAATAATAAAATAAttt                     >  1:6595188/1‑128 (MQ=255)
                                                                                                              aCTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATGAAAATATAAATTTTAGTTTTTTTGTTGGAAAAGTATAAAAAAAAATAAAAAGAAAAAAATTTTTTAAAAATTAATAAAAAAATTAttt                     >  1:5116878/1‑128 (MQ=255)
                                                                                                               cTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGTAAAAATAAATTTTAGTTTTTTTTTTGAATAATTATAAAAAAAAATATAAAGTAAAAAAATTTTTTTAAATAATTAAAAAAATTATTTat                   >  2:2758092/1‑127 (MQ=255)
                                                                                                                 tttAAAAAATAGA‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATg                 <  1:5209432/126‑1 (MQ=255)
                                                                                                                   tAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATTTAAAAATAAATTTTAGGTATTTTTTTTTATATTTTTATAAAAAATTATAAAGTAAAAAATTTTTTTAAAATTAATTCTAAATATATTTAAtttt               >  1:3065513/1‑128 (MQ=255)
                                                                                                                    aaaaaaTAGC‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGtt               <  1:5514361/128‑1 (MQ=255)
                                                                                                                       aaaaatatatttttttttttttttttATAATGGAAATATAAATTTTAGGTATTTTGTTGCCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGttaa             <  1:2352176/119‑1 (MQ=255)
                                                                                                                       aaaTAGCTTTTTTTTTTTTTTTTTTTTTTATGGAAATTTAAATTTTAGGTTTTTTTTTTTATAATTATATAAAAAAATAAAATGAAAAAATTATTTTTAAAATAAATACTAAAATTTTTTATTGtaaa             >  1:4358959/1‑128 (MQ=255)
                                                                                                                       aaaTAGCTTTTTTTTTTTTTTTTTTT‑TAATGTAAAAATAAATTTTAGTTTTTTTTTTGTTTAATTATATAAAAAAATATAATGAAAAATATATTTTTAAAATAATTAATAAAATAATTTAATGttatt            >  1:4070660/1‑126 (MQ=255)
                                                                                                                         ttttttttttttttttttttttttATAATTGAAATATAAATTTTAGTTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAATGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGttaatt           <  1:295819/123‑1 (MQ=255)
                                                                                                                          aaattttttttttttttttttttATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGttaatta          <  2:392273/124‑1 (MQ=255)
                                                                                                                          aaatattttttttttttttttttATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGttaatta          <  2:297186/123‑1 (MQ=255)
                                                                                                                                 |                                                                                                                                
ATATTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATA‑TTTTTTGTATATGC‑AAATTTTAAAAGAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTTAA  >  CP016816/165126‑165381

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.