BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP016816	165253 =	2161 (0.690)	411 (0.150)	114/218	34.9	18.5%	intergenic (+217/‑325)	JCVSYN2_00665/JCVSYN2_00670	tRNA N6‑adenosine(37)‑N6‑threonylcarbamoyltransferase complex dimerization subunit TsaB/tRNA‑Ser
*	?	CP016816	= 165249	1733 (0.630)	411 (0.150)	114/218	34.9	18.5%	intergenic (+213/‑329)	JCVSYN2_00665/JCVSYN2_00670	tRNA N6‑adenosine(37)‑N6‑threonylcarbamoyltransferase complex dimerization subunit TsaB/tRNA‑Ser
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 2356 total aligned reads displayed.

GATAATATTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAA‑TTTTAAAAGAATTAATTTGAACTTGTAAAAAATA‑GCTTTTTTTTTTTTT‑TTTTTTATAATGGAAATATAAATTTT‑AGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAA‑TATTGT‑TAAAAGTAATACTAAAATTATTTAATGTTAATTAAAA  >  CP016816/165122‑165376

  taataTTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTTTATA‑TTCAAA‑TTTTTAAAAAATTAATTTTAAATTGTAAAAAATA‑GAtt                                                                                                                                   >  1:4683328/1‑128 (MQ=255)

  taataTTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAA‑TTTTTAAAAAATTAATTTTAACTTGTAAAAAATA‑GCtt                                                                                                                                   >  1:5359412/1‑128 (MQ=255)

   aataTTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑GCttt                                                                                                                                  >  1:6601992/1‑128 (MQ=255)

   aataTTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑GCttt                                                                                                                                  >  2:3608378/1‑128 (MQ=255)

   aaaatttatttTCAATAATTTATCCCACTTGTTTTCAATATTAATAAACTAAAACTATTATCTTTTTATATATTTTTTTTAAA‑TGCAAA‑TTTTTAAAAAATAAAATTGAACTTTTAAAAAATA‑GCttt                                                                                                                                  <  2:5491959/125‑1 (MQ=255)

         tattttaaatAATTTATCGCACTTTTTTTAATTAGTAACTAACTAAAACTATTATATTTTTATTTATTTTTTGTAAA‑TTCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑TCttttttttt                                                                                                                            <  2:5250633/119‑1 (MQ=255)

         tAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑GCttttttttt                                                                                                                            >  2:859583/1‑128 (MQ=255)

         tAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑GCttttttttt                                                                                                                            >  1:893120/1‑128 (MQ=255)

         tAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑GCttttttttt                                                                                                                            >  1:3782941/1‑128 (MQ=255)

         tAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑GCttttttttt                                                                                                                            >  2:4594614/1‑128 (MQ=255)

         tAGTTTAAATAATTTATCGCAAGTGTTTTTATTAGTAACAAACTATAACTATTATATTTTTATATATTTTTTTTATA‑TGCAAA‑TTTTTTAAAAATTTCTTTGAACTTGTTAAAAATA‑GCttttttttt                                                                                                                            <  1:3612894/128‑1 (MQ=255)

           gTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑TCttttttttttt                                                                                                                          >  2:1038529/1‑128 (MQ=255)

           gTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑GCttttttttttt                                                                                                                          >  2:3346795/1‑128 (MQ=255)

           gTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑GCttttttttttt                                                                                                                          >  1:273906/1‑128 (MQ=255)

             ttCAATCATTTAACCCACTTTTATTAATTAGAAAGAAACAAAAACTAATAAATTTTTAGATATTTTTTGTAAA‑TTCAAA‑ATTTTAAAAAATAAATTTTAACCTGTAAAAAAAA‑GCttttttttttttt                                                                                                                        <  1:3381930/128‑1 (MQ=255)

               cATTTATTTATAGAAATTTTATTAATTAGTAATAAACTAAAAATATTATATTTTTATATTTTTTTTGTTTA‑AGCAAA‑TTTTTAAAAAATTAATTTTTACTTGTAAAAAATA‑GCttttttttttttt‑tt                                                                                                                     <  1:444334/128‑1 (MQ=255)

                  tAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑GCatttttatatttt‑tatat                                                                                                                  >  2:1749399/1‑124 (MQ=255)

                    aTTTTTAGCACTTTTATTAATTATTTATAAACTAAAAATATTATTTTTTTTTATATTTTTTTTATA‑TTTAAA‑TTTTTTAAAAATTAATTTTAACTTTTAAAAAAAA‑GCTTTTTTTTTTTTT‑TTTtata                                                                                                                <  2:6207751/128‑1 (MQ=255)

                      ttATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTATATATTTTTTGTATA‑TGCAAA‑TTTTTAAAAAAATAATTTGAACTTGTAAACAATA‑GCtttatgttttttg‑tttttaaat                                                                                                              >  2:4482439/1‑124 (MQ=255)

                       tatatcACTTGTATGAATTATTAAGAAAATAAAAATATTATCTTTTTATATAATTTTTGTATA‑TGCAAA‑TTTTTAAAAAAATAAATTTAAATTGTAAAAAATA‑GCGTTTTTTTTTTTT‑TTTtataatg                                                                                                             <  1:3693343/123‑4 (MQ=255)

                       tataggaCTTTTATTAATTATTTATAAAAAAAAAATATTTTCTTTTTATATATTTTTTGTATA‑TTCAAA‑TTTTTAAAAAAATAAATTTAACATTTAAAAAAAA‑CCTTTTTTTTTTTTT‑TTTtataatg                                                                                                             <  1:6401323/122‑4 (MQ=255)

                        atttcaattGTATTAATTATTAATAAACAAAAAATAATATATTTTTATATATTTTTTTTATA‑TTCAAA‑TTTTTTAAAAATTAATTTTTAATTTTAAAAAATA‑TC‑TTTTTTTTTTTT‑TTTTTTATAATg                                                                                                           <  2:4053006/121‑1 (MQ=255)

                           gCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑GCttttttttttttt‑tttttaaaattgaa                                                                                                         >  2:121268/1‑119 (MQ=255)

                            cACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑GCTTTTTTTTTTTTT‑TTTTTtttattaata                                                                                                        >  2:5700347/1‑122 (MQ=255)

                               ttGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑GCTTTTTTTTTTTTT‑TTTtataatttaaaaata                                                                                                     >  2:3210451/1‑117 (MQ=255)

                               ttGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑GCTTTTTTTTTTTTT‑TTTTTTTTAATTTAAata                                                                                                     >  2:1595761/1‑128 (MQ=255)

                               ttGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑GC‑TTTTTTTTTTTT‑TTTTTTATAAtttaaaaat                                                                                                    >  1:312881/1‑120 (MQ=255)

                                tGTATGAATTATTAATAAAATAAAACTATTATCTTTTTATATATTTTTTTTAAA‑TTCAAA‑TTTTTAAAAAATTAATTTTAACTTGTAAAAAA‑A‑ACCTTTTTTTTTTTT‑TTTTTTATAATGGAAAtata                                                                                                   <  2:4188033/128‑1 (MQ=255)

                                  tATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑GC‑TTTTTTTTTTTT‑TTTTTTATATTTGAAATAaaaa                                                                                                 >  2:4749000/1‑128 (MQ=255)

                                  tATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑GC‑TTTTTTTTTTTT‑TTTTTTATATTTCAAATATaaa                                                                                                 >  1:5919621/1‑128 (MQ=255)

                                   aTGTATTAGTAATAAAATAAAACTATTATATTTTTATTTATTTTTTTTATA‑TGCAAA‑TTTTTAAAAAATTAATTTTAAATTGTAAAAAATA‑GC‑‑TTTTTTTTTTT‑TTTTTTATAATGGAAATATAAAtt                                                                                               <  1:6134934/128‑1 (MQ=255)

                                    tttattattAATAAACTAAAACTAATTTATTTTTTTTTATTTTTTGTTTA‑TGCAAATTTTTAAAAAAATATATTTTAA‑TTGTAAAAAATA‑TC‑TTTTTTTTTTTT‑TTTTTTATAATGGAAATATAAAtt                                                                                               <  1:456617/125‑1 (MQ=255)

                                       aTTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑GCTTTTTTTTTTTTTATTTTTTATAAAGTAAAAATAAAttt                                                                                              >  2:6343886/1‑128 (MQ=255)

                                         tAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑GCTTTTTTTTTTTTT‑TTTTTTA‑AATTGAATAATAAATTTT‑aat                                                                                         >  1:1235416/1‑126 (MQ=255)

                                         tAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑GC‑TTTTTTTTTTTT‑TTTTTTATATATGAAATAAAAAtttttat                                                                                          >  2:136218/1‑125 (MQ=255)

                                          ttttatttaataaaaataTTTTTTTTTTATATTTTTTTTTTTTT‑TTCTAA‑TTTTTAAAAAATTTATTTGATATTGTTAAAAATA‑G‑‑GTTTTTTTTTTT‑TTTTTTATAATGGAAATATAAATTTT‑AGGTa                                                                                       <  1:3492325/118‑1 (MQ=255)

                                          attttctatttaaaaaaaTTTTATTTTTATTTATTTTTTTTTTA‑TTCAAA‑TTTTTTAAAAATTAATTTTAAATTTTAAAAAAAA‑GC‑TTTTTTTTTTTT‑TTTTTTATAATGGAAATATAAATTTT‑AGGt                                                                                        <  1:1683736/118‑1 (MQ=255)

                                          aGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑GCTTTTTTTTTTTTT‑TTTTTT‑TATTGTAATTTTTAATTTT‑Agtt                                                                                        >  1:5453754/1‑126 (MQ=255)

                                           ttaattaaataaaaataTTTTTTTTTTTTATTTTTTTTTTATATTATAAA‑TTTTAAAA‑AATTTTTTTTAAATTGTTAAAAATA‑G‑GTTTTTTTTTTTT‑TTTTTTATAATGGAAATATAAATTTT‑AGGTa                                                                                       <  1:509723/119‑1 (MQ=255)

                                           ttaataaAATAAAAATATTTATTTTTTATTTATTTTTTGTTTT‑TTAAAA‑TTTTTAAAAAATTAATTTTTAATTTTAAAAAAAA‑‑‑TCTTTTTTTTTTT‑TTTTTTATAATGGAAATATAAATTTT‑AGGTAt                                                                                      <  1:1128138/127‑1 (MQ=255)

                                            tAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑GC‑TTTTTTTTTTTT‑TTTTTTATAATGTAAATATAAATTTT‑TGTTAt                                                                                      >  1:5172515/1‑128 (MQ=255)

                                            tAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑GC‑TTTTTTTTTTTT‑TTTTTAATAAAATAAATAAAAAtttatattat                                                                                       >  1:4015009/1‑121 (MQ=255)

                                            tAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑GC‑‑‑TTTTTTTTTT‑TTTTTTATAATGGAAATATAAATTTT‑ATGTAttt                                                                                    >  2:3456849/1‑128 (MQ=255)

                                             aaGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑GC‑TTTTTTTTTTTT‑TTTTTTA‑AATGTAAATATAAATTTT‑ATGTAttt                                                                                    >  1:4836732/1‑128 (MQ=255)

                                              tgaaaaaaaaaattTTAACTTTTTATTTATTTTTTGTATA‑TCTAAA‑TTTTTAAAAAAATAATTTTAAAATTTAAAAAATA‑‑TGTTTTTTTTTTTT‑TTTTTTATAATGGAAATATAAATTTT‑AGGTAttt                                                                                    <  1:6264123/121‑1 (MQ=255)

                                                aaactaaaactaTTATCTTTTTAGATATTTTTTGTATA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑GC‑TTTTTTTTTTTT‑TTTTTTATAATGAAAATATAAATTTA‑AGTAAttttt                                                                                  >  1:4957712/1‑127 (MQ=255)

                                                   ctaaaactaTTATCTTTTTAGATATTTTTTGTATA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑GC‑TTTTTTTTTTTT‑TTTTTTATAATTTAAATATAAATTTT‑ATTTATttttttt                                                                               >  1:6512890/1‑127 (MQ=255)

                                                   ctaaaactaTTATCTTTTTAGATATTTTTTGTATA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑GC‑TTTTTTTTTTTT‑TTTTTTATAATTGAAAT‑TAAATTTTAATGTATttttttt                                                                               >  1:5562371/1‑127 (MQ=255)

                                                     aaaactaTTATCTTTTTAGATATTTTTTGTATA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑GC‑‑TTTTTTTTTTT‑TTTTTTATAATGTAAATATTAATTTT‑AGTTTTTttgttttat                                                                            >  2:2904011/1‑124 (MQ=255)

                                                      aaactaTTATCTTTTTAGATATTTTTTGTATA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑GC‑TTTTTTTTTTTT‑TTTTTTATAATTTAAATATAAATTTT‑ATTTATttttttttat                                                                            >  1:412239/1‑124 (MQ=255)

                                                       aattattttTTTTTTTTATATTTTTTGTATA‑TTCAAA‑TTTTTAAAAAATTATATTTAAATTGTAAAAAAAA‑GC‑TTTTTTTTTTTT‑TTTTTTATAATGGAAATATAAATTTT‑AGGTATTTTGTTGTCTa                                                                           <  2:4342302/125‑1 (MQ=255)

                                                        actaTTATCTTTTTAGATATTTTTTGTATA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑GCTTTTTTTTTTTTT‑TTTTTTAT‑ATTAAAATATAAATTTT‑TGttttttttttttgaat                                                                          >  2:668987/1‑122 (MQ=255)

                                                          tattatCTTTTTAGATATTTTTTGTATA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑GC‑TTTTTTTTTTTT‑TTTTTTATAATTTAAATATAAATTTT‑ATTTATTTTTTTTTATaatt                                                                        >  1:176240/1‑126 (MQ=255)

                                                          tattatCTTTTTAGATATTTTTTGTATA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑GC‑TTTTTTTTTTTT‑TTTTTTATAATGTAAATATAAATTTT‑AGTTATTTTGTTGTCTattt                                                                        >  1:1872550/1‑125 (MQ=255)

                                                            ttatCTTTTTAGATATTTTTTGTATA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑GC‑TTTTTTTTTTTT‑TTTTTTAAAATTAAAATATAAATTTA‑ATGAATTTTTTTTTATAATTAt                                                                      >  1:2635139/1‑128 (MQ=255)

                                                             tatTTTTTTATATTTTTTTTTTAAT‑TTCAAA‑TTTTTAAAAAAATAAATTTTACATTTAAAAAAAA‑ACTTTTTTTTTTTTT‑TTTTTTATAATGGAAATATAAATTTT‑AGGTATTTTGTTGTCTAAGTAt                                                                      <  1:5295266/128‑1 (MQ=255)

                                                               ttttttttTATAATTTTTTTATT‑TTTAAA‑ATTTTTAAAAATTTATTTTTAATTTTAAAAAAAA‑TC‑TTTTTTTTTTTT‑TTTTTTATAATGGAAATATAAATTTT‑AGGTATTTTGTTGTCTAAGTATCTa                                                                   <  1:2260403/126‑1 (MQ=255)

                                                                  ttttAGATATTTTTTGTATA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑GCTTTTTTTTTTTTT‑TTTTTT‑TTATGTAATAATAATTTTT‑TGTTTTTTTTTTGTTTatttaataaaaa                                                                >  2:736748/1‑117 (MQ=255)

                                                                  ttttAGATATTTTTTGTATA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑GC‑TTTTTTTTTTTT‑TTTTTTATAATTTAAATAAAAATTTT‑ATTAATTTTTTTTTATAATTATATaaaa                                                                >  1:1001558/1‑128 (MQ=255)

                                                                  ttttAGATATTTTTTGTATA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑G‑ATTTTTTTTTTTT‑TTTTTTATAATTTAAATAAAAATTTT‑ATTTATTTTTTTATATAATTATaaaaaa                                                                >  1:1423437/1‑128 (MQ=255)

                                                                     tttttatTTTTTTTTTT‑TTTAAA‑TTTTTTAAAAATTAAATTTAAATTTTTAAAAAT‑‑TTTTTTTTTTTTTTT‑TTTTTTATAATGGAAATATAAATTTT‑AGGTATTTTGTTGTCTAAGTATCTaaaaaaa                                                             <  1:1997321/124‑1 (MQ=255)

                                                                     tAGATATTTTTTGTATA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑GC‑TTTTTTTTTTTT‑TTTTTTATAATGTAAATTTAAATTTT‑TGGTATTTTTTTGTATAAGTAAATaaaaaaa                                                             >  1:1338649/1‑128 (MQ=255)

                                                                     tAGATATTTTTTGTATA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑GC‑TTTTTTTTTTTT‑TTTTTTATAATGTAAATATAAATTTT‑AGGTATTTTTTTTACTAAGTATATaaaaaaa                                                             >  1:6828792/1‑128 (MQ=255)

                                                                      atatatTTTTTGTTTA‑TCGAAA‑TTTTTAAAAAATTAATTTTTAAATTTAAAAAAAA‑TC‑TTTTTTTTTTTT‑TTTTTTATAATGGAAATATAAATTTT‑AGGTATTTTGTTGTCTAAGTATCTAAAAAAAt                                                            <  1:4286602/126‑1 (MQ=255)

                                                                        atatTTTTTTTTTT‑TTAAAA‑TTTTTAAAAAATTAATTTTTAATTTTTAAAAATA‑TC‑TTTTTTTTTTTT‑TTTTTTATAATGGAAATATAAATTTT‑AGGTATTTTGTTGTCTAAGTATCTAAAAAAATAg                                                          <  2:3780305/128‑1 (MQ=255)

                                                                        atatTTTTTTTATT‑TTCAAA‑TTTTTTAAAAAATAATTTTAAAATTTAAAAAATA‑AC‑TTTTTTTTTTTT‑TTTTTTATAATGGAAATATAAATTTT‑AGGTATTTTGTTGTCTAAGTATCTAAAAAAATAg                                                          <  1:1518058/128‑1 (MQ=255)

                                                                        atatTTTTTGTTTA‑TTCAAA‑TTTTTAAAAAATTAATTTTAAATTTTAAAAAATA‑GC‑TTTTTTTTTTTT‑TTTTTTATAATGGAAATATAAATTTT‑AGGTATTTTGTTGTCTAAGTATCTAAAAAAATAg                                                          <  2:2225887/128‑1 (MQ=255)

                                                                        atatTTTTTGTATA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑GC‑TTTTTTTTTTTT‑TTTTTTATAATTAAAAAATAATTTTT‑ATATATTTTTTTTACTAaaaaaataaaaaaataa                                                          >  2:2684847/1‑127 (MQ=255)

                                                                         tatTTTTTTTTTA‑TTTAAA‑TTTTTTAAAAATTAATTTTTAATTTTAAAAAATA‑TTTTTTTTTTTTTTT‑TTTTTTATAATGGAAATATAAATTTT‑AGGTATTTTGTTGTCTAAGTATCTAAAAAAATAg                                                          <  2:2104384/128‑1 (MQ=255)

                                                                         tatTTTTTTTATA‑TTAAAA‑TTTTTAAAAAATTTATTTTAATTTTTAAAAAAT‑‑‑TTTTTTTTTTTTTT‑TTTTTTATAATGGAAATATAAATTTT‑AGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGaa                                                        <  2:2506476/128‑1 (MQ=255)

                                                                          tttttttttATT‑TTTAAA‑TTTTTAAAAAATTAATTTTTAATTTTAAAAAATATTTTTTTTTTTTTTTT‑TTTTTTATAATGGAAATATAAATTTT‑AGGTATTTTGTTGTCTAAGTATCTAAAAAAATAg                                                          <  2:5571886/127‑1 (MQ=255)

                                                                           ttttttGTATA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑GC‑‑‑TTTTTTTTTT‑TTTTTTATATTTTAAATAAAAATTTT‑TTTTTTTTTTTATTATAAGTATATAAAAAAatagatagt                                                     >  1:2506866/1‑127 (MQ=255)

                                                                             ttttGTATA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑GC‑TTTTTTTTTTTT‑TTTTTTAAATTGTAAATAAAAATTTT‑AGTAATTTTTTTTTATAATTAAATAaaaaaaaaaaaata                                                     >  2:6619785/1‑126 (MQ=255)

                                                                                    ta‑tGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑GC‑TTTTTTTTTTTT‑TTTTTTAAAATTAAAATATAATTTTT‑TTTTATTTTTTTTTATAATTATAAAAAAAAATAAAAATTAAAAAa‑t                                             >  1:5685775/1‑128 (MQ=255)

                                                                                       tGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑GC‑TTTTTTTTTTTT‑TTTTTTATAAAGGAAATATAAATTTT‑TTTTAATTTTTTTTATAATTTAATAAAAAATAAAAAAGAAAAAAa‑tat                                           >  2:6007740/1‑128 (MQ=255)

                                                                                        taaaa‑TTTTTAAAAAATTAATTTTAAATTTTAAAAAATA‑‑‑TCTTTTTTTTTTT‑TTTTTTATAATGGAAATATAAATTTT‑AGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAA‑TATTg                                         <  2:3922635/126‑1 (MQ=255)

                                                                                         cAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑GCTTTTTTTTTTTTT‑TTTTTTA‑ATTTAAAATATAATTTTT‑AGGTATTTTGTTGTATTTGTGTTAAAAAAAATATAATGGAAAAAT‑AATTg                                         >  2:3052646/1‑128 (MQ=255)

                                                                                          aaa‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑GCTTTTTTTTTTTTT‑TTTTTTATAATTTAAAAAAAAATTTT‑ATGTATTTTTTTTTAAAAATATAAAAAAAAATAAAAATTAAAAAA‑AAttt                                         >  2:5852772/1‑127 (MQ=255)

                                                                                           aa‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑GCTTTTTTTTTTTTT‑TTTTTTATAATGTAAATAAAAATTTT‑ATTTATTTTTTTTTATAATTATAAAAAAAAAAATAAATTAAAAAA‑tttttt                                        >  1:3228296/1‑126 (MQ=255)

                                                                                           aa‑TTTTTAAAAAATTAATTTGAAATTTTAAAAAATA‑TC‑TTTTTTTTTTTT‑TTTTTTATAATGGAAATATAAATTTT‑AGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAA‑TATTGt‑t                                      <  2:5385762/128‑1 (MQ=255)

                                                                                                   aaaaaaTTAATTTGAACTTGTAAAAAATA‑GCTTTTTTTTTTTTT‑TTTTTTTTAATTGAAATATAAATTTT‑AGGTTTTTTTTTGTATAATTTTTAAAAAAAATATAAAGTAAAAAA‑TATTTT‑Taaaatt                                >  1:6713759/1‑126 (MQ=255)

                                                                                                    aaaaattaattTGAACTTGTAAAAAATA‑GC‑‑TTTTTTTTTTT‑TTTTTTATAATGTAAATATAAATTTT‑ATTTATTTTTTTTTATAATTAAATAAAAAAATATAAAAAAAAAAA‑AATTTT‑TAAAATTaaa                             >  2:146155/4‑127 (MQ=255)

                                                                                                     aaaattaattTGAACTTGTAAAAAATA‑GC‑TTTTTTTTTTTT‑TTTTTTATAATGTAAATATAAATTTT‑AGTTTTTTTTTTTTAAATTTTAAAAAAAAAATAAAATGGAAAAAA‑TATTTA‑TAAAATTAAt                             >  2:2321418/3‑128 (MQ=255)

                                                                                                      aaattaattTGAACTTGTAAAAAATA‑GC‑TTTTTTTTTTTT‑TTTTATATAATGGAAATATAAATTTT‑AGGTATTTTTTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAA‑TATTGT‑TAAAAGAAATa                            >  1:760297/2‑128 (MQ=255)

                                                                                                       aattaattTGAACTTGTAAAAAATA‑GC‑TTTTTTTTTTTT‑TTTTTTATAATGTAAATATAAATTTT‑AGGTATTTTGTTGTCTAAGTATAAAAAAAAAAAGAAACGAAAAAA‑AATTTT‑TAAAAGTaaaaa                           >  2:6468235/1‑125 (MQ=255)

                                                                                                       aattaattTGAACTTGTAAAAAATA‑GC‑TTTTTTTTTTTT‑TTTTTTATAATGGAAATATAAATTTT‑AGGTTTTTTGTTGTATAAGTATATAAAAAAATAGAAAGGAAAAAA‑TATTTT‑TAAAAGTAATaa                           >  1:5797721/1‑127 (MQ=255)

                                                                                                       aattaattTGAACTTGTAAAAAATA‑GC‑TTTTTTTTTTTT‑TTTTTTAAAATTGAAATATAAATTTT‑ATGTTTTTTGTTTTCTAAGTAATAAAAAAAATAATATTGAAAAAA‑TATTGTATaaaatataac                            >  2:4862471/1‑122 (MQ=255)

                                                                                                        attaattTGAACTTGTAAAAAATA‑GCTTTTTTTTTTTTT‑TTTTTTATAATGGAAATATAATTTTT‑ATGTATTTTTTTGTATAATTATATAAAAAAATATAAAGAAAAAAA‑TATTTT‑Taaattaaaaac                           >  1:6055890/1‑120 (MQ=255)

                                                                                                        attaattTGAACTTGTAAAAAATA‑GCTTTTTTTTTTTTT‑TTTTTTAAAATGTAATTAAAATTTTT‑AGGTATTTTTTTTTAAAAGTAAAAAAAAATATAAAAATTAAAAAA‑TTTTTT‑TAAAAttattat                           >  2:5079169/1‑127 (MQ=255)

                                                                                                        attaattTGAACTTGTAAAAAATA‑GC‑TTTTTTTTTTTT‑TTTTTTATAATGTAAATATAAATTTT‑AGTTTTTTTTTTTTATAATTAAAAAAAAAAATTAAAATAAAAAAA‑TATTTT‑TAAAATTAATaaa                          >  2:2416504/1‑126 (MQ=255)

                                                                                                        attaattTGAACTTGTAAAAAATA‑GC‑TTTTTTTTTTTT‑TTTTTTATAATGGAAATAAAAATTTT‑AGTTATTTTTTTGTATAATTATATAAAAAAATAGAAAGTAAAAAA‑TATTTT‑TAAAATTAATaat                          >  1:2123864/1‑126 (MQ=255)

                                                                                                         ttaattTGAACTTGTAAAAAATA‑GC‑‑TTTTTTTTTTT‑TTTTTTATAATGAAAATATAAATTTT‑AGGTATTTTTTTGTAAAATTATAAAAAAAAAAATAAATGAAAAAA‑AATTTT‑Taaaataaaaaaaaa                        >  2:681380/1‑118 (MQ=255)

                                                                                                          taattTGAACTTGTAAAAAATA‑GC‑TTTTTTTTTTTT‑TTTTTTATAATGGAAATATAAATTTT‑TGGTATTTTTTTTTCTTATTTTATAAAAAAATAAAAATTAAAAAT‑TATTTT‑TAAAATtaataataa                        >  1:299520/1‑128 (MQ=255)

                                                                                                            attTGAACTTGTAAAAAATA‑GC‑TTTTTTTTTTTT‑TTTTTTATATTGTAATAAAAAATTTT‑TTTTATTTT‑TTTTTAAATTATATAAAAAAATTAAAATTAAAAAATTATTTT‑TAAATTTATTAATaaat                      >  1:2845888/1‑127 (MQ=255)

                                                                                                                 aaCTTGTAAAAAATA‑GC‑‑TTTTTTTTTTT‑TTTTTTATAATGAAAATTTAAATTTT‑AGGTATTTTTTTGTATAATTATATAAAAAAATAGAAAGGAAAAAA‑TTTTTT‑TAAAATTAATAATAAAATTAttt                >  2:5147632/1‑128 (MQ=255)

                                                                                                                  aattttAAAAAATA‑TTTTTTTTTTTTTTT‑TTTTTTATAATGGAAATATAAATTTT‑AGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAA‑TATTGT‑TAAAAGTAATACTAAAattatt                 <  1:2414225/123‑1 (MQ=255)

                                                                                                                       ttaaaaaTT‑TCTTTTTTTTTTTTT‑TTTTTTATAATGGAAATATAAATTTT‑AGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAA‑TATTGT‑TAAAAGTAATACTAAAATTATTTAATg            <  2:1873751/126‑1 (MQ=255)

                                                                                                                           aaaTA‑GCTTTTTTTTTTTTT‑TTTTTTATAATGGAAATATAAATTTT‑AGGTTTTTTTTTGTGTATGTATGTAAAAAAATATAAAGGAAAAAA‑TATTTT‑TAAAATTAATAATTAAATTATTTAATGttta        >  1:3879119/1‑126 (MQ=255)

                                                                                                                           aaaTA‑GCTTTTTTTTTTTTT‑TTTTTT‑TAATGGAAATATAAATTTT‑TGGTTTTTTGTTGTCTAATTATCAAAAAAAATTTAATGTAAAAAA‑TATTGT‑TAAAAGTAATACTAATATTATTTATTGttaat       >  2:609469/1‑128 (MQ=255)

                                                                                                                           aaaTA‑GC‑TTTTTTTTTTTT‑TTTTTTATAATGTAAATAAAAATTTT‑AGTTATTTTTTTTTGAAATTATAAAAAAAAAAATAAATCAAAAAA‑AATTTT‑AAAAATTAATAATAAAATTAtttaattttaat       >  2:2003134/1‑128 (MQ=255)

GATAATATTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAA‑TTTTAAAAGAATTAATTTGAACTTGTAAAAAATA‑GCTTTTTTTTTTTTT‑TTTTTTATAATGGAAATATAAATTTT‑AGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAA‑TATTGT‑TAAAAGTAATACTAAAATTATTTAATGTTAATTAAAA  >  CP016816/165122‑165376

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.