mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.29.0 revision 8f9c342918e4
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal read alignment evidence (highest frequency 20 of 233 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 226,392 | 0 | C | G | 75.6% | 25.5 / 60.4 | 78 | noncoding (634/2904 nt) | rrlH | 23S ribosomal RNA of rrnH operon |
| * | NC_000913 | 226,354 | 0 | T | A | 75.3% | 6.1 / 111.3 | 142 | noncoding (596/2904 nt) | rrlH | 23S ribosomal RNA of rrnH operon |
| * | NC_000913 | 226,387 | 0 | G | C | 74.7% | 31.1 / 68.0 | 83 | noncoding (629/2904 nt) | rrlH | 23S ribosomal RNA of rrnH operon |
| * | NC_000913 | 226,357 | 0 | A | G | 73.6% | 18.5 / 90.2 | 125 | noncoding (599/2904 nt) | rrlH | 23S ribosomal RNA of rrnH operon |
| * | NC_000913 | 226,384 | 0 | A | T | 72.7% | 36.3 / 69.2 | 88 | noncoding (626/2904 nt) | rrlH | 23S ribosomal RNA of rrnH operon |
| * | NC_000913 | 226,371 | 0 | A | T | 72.3% | 38.4 / 87.9 | 101 | noncoding (613/2904 nt) | rrlH | 23S ribosomal RNA of rrnH operon |
| * | NC_000913 | 226,381 | 0 | C | G | 71.9% | 42.1 / 79.6 | 89 | noncoding (623/2904 nt) | rrlH | 23S ribosomal RNA of rrnH operon |
| * | NC_000913 | 226,378 | 0 | G | T | 70.7% | 44.4 / 78.9 | 92 | noncoding (620/2904 nt) | rrlH | 23S ribosomal RNA of rrnH operon |
| * | NC_000913 | 226,363 | 0 | G | C | 70.6% | 49.1 / 109.5 | 109 | noncoding (605/2904 nt) | rrlH | 23S ribosomal RNA of rrnH operon |
| * | NC_000913 | 226,403 | 0 | C | T | 70.2% | 21.5 / 40.4 | 47 | noncoding (645/2904 nt) | rrlH | 23S ribosomal RNA of rrnH operon |
| * | NC_000913 | 226,404 | 0 | T | A | 70.2% | 21.4 / 40.2 | 47 | noncoding (646/2904 nt) | rrlH | 23S ribosomal RNA of rrnH operon |
| * | NC_000913 | 4,038,817 | 0 | G | A | 69.6% | 30.4 / 47.6 | 56 | noncoding (1299/2905 nt) | rrlA | 23S ribosomal RNA of rrnA operon |
| * | NC_000913 | 4,038,811 | 0 | T | A | 69.5% | 36.3 / 58.2 | 59 | noncoding (1293/2905 nt) | rrlA | 23S ribosomal RNA of rrnA operon |
| * | NC_000913 | 4,038,805 | 0 | G | A | 68.3% | 37.0 / 56.0 | 60 | noncoding (1287/2905 nt) | rrlA | 23S ribosomal RNA of rrnA operon |
| * | NC_000913 | 4,038,807 | 0 | C | A | 68.3% | 39.4 / 62.0 | 60 | noncoding (1289/2905 nt) | rrlA | 23S ribosomal RNA of rrnA operon |
| * | NC_000913 | 4,038,809 | 0 | G | C | 68.3% | 41.0 / 65.3 | 60 | noncoding (1291/2905 nt) | rrlA | 23S ribosomal RNA of rrnA operon |
| * | NC_000913 | 4,038,797 | 0 | G | T | 67.2% | 44.9 / 72.7 | 61 | noncoding (1279/2905 nt) | rrlA | 23S ribosomal RNA of rrnA operon |
| * | NC_000913 | 4,038,781 | 0 | A | G | 67.0% | 62.9 / 85.3 | 91 | noncoding (1263/2905 nt) | rrlA | 23S ribosomal RNA of rrnA operon |
| * | NC_000913 | 4,038,795 | 0 | C | G | 66.1% | 49.9 / 73.1 | 62 | noncoding (1277/2905 nt) | rrlA | 23S ribosomal RNA of rrnA operon |
| * | NC_000913 | 226,545 | 0 | C | T | 65.9% | 90.3 / 93.3 | 85 | noncoding (787/2904 nt) | rrlH | 23S ribosomal RNA of rrnH operon |