| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 4,119,238 | Δ18 bp | coding (76‑93/486 nt) | rraA ← | ribonuclease E (RNase E) inhibitor protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4119237 | 2 (0.030) | 56 (0.940) | 52/278 | 0.3 | 96.7% | coding (94/486 nt) | rraA | ribonuclease E (RNase E) inhibitor protein |
| ? | NC_000913 | 4119256 = | 2 (0.030) | coding (75/486 nt) | rraA | ribonuclease E (RNase E) inhibitor protein | |||||
GTGCGCGACGAACAGAACCACCGCCATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAACGACGCCCGTCCGCCAAAGTTGGAGAACAGCGGTTCCACGACGTTAACATCTTCTTGATAGATGTCACAAAGCTCGGAAGTATCGTATTTCATAGGCTTAACATTCAGTTGCTGCGAGAATTTTCAGTATATCGCGCTATGTGGGCTGTTGGCAAAATCATCAATTG > NC_000913/4119114‑4119404 | ccagttcagcatcgaccagtgcgcgacgaacagaaccaccgccatcgacgacaagaacacgaccacggccattctgttcgagcagatcgtacagcaacccgttgtcctcgaaacattttaccgtgattatttgtccgccaaaGTTGgaga < 2:503789‑M2/8‑1 (MQ=255) cagttcagcatcgaccagtgcgcgacgaacagaaccaccgccatcgacgacaagaacacgaccacggccattctgttcgagcagatcgtacagcaacccgttgtcctcgaaacattttaccgtgattatttgtccgccaaaGTTGGAGAAc < 1:190182‑M2/10‑1 (MQ=255) tcagcatcgaccagtgcgcgacgaacagaaccaccgccatcgacgacaagaacacgaccacggccattctgttcgagcagatcgtacagcaacccgttgtcctcgaaacattttaccgtgattatttgtccgccaaaGTTGGAGAACAGc < 2:12711‑M2/13‑1 (MQ=255) tcagcatcgaccagtgcgcgacgaacagaaccaccgccatcgacgacaagaacacgaccacggccattctgttcgagcagatcgtacagcaacccgttgtcctcgaaacattttaccgtgattatttgtccgccaaaGTTGGAGAACAGCg > 1:228524‑M2/138‑151 (MQ=255) agcatcgaccagtgcgcgacgaacagaaccaccgccatcgacgacaagaacacgaccacggccattctgttcgagcagatcgtacagcaacccgttgtcctcgaaacattttaccgtgattatttgtccgccaaaGTTGGAGAACAGCg > 1:124768‑M2/136‑149 (MQ=255) atcgaccagtgcgcgacgaacagaaccaccgccatcgacgacaagaacacgaccacggccattctgttcgagcagatcgtacagcaacccgttgtcctcgaaacattttaccgtgattatttgtccgccaaaGTTGGAGAACAGCGGTTcc > 2:744502‑M2/133‑151 (MQ=255) accagtgcgcgacgaacagaaccaccgccatcgacgacaagaacacgaccacggccattctgttcgagcagatcgtacagcaacccgttgtcctcgcaacattttaccgtgattatttgtccgccaaaGTTGGAGAACAGCGGTTCCacg > 2:917925‑M2/129‑150 (MQ=255) gtgcgcgacgaacagaaccaccgccatcgacgacaagaacacgaccacggccattctgttcgagcagatcgtacagcaacccgttgtcctcgaaacattttaccgtgattatttgtccgccaaaGTTGGAGAACAGCGGTTCCACGACGtt < 1:132928‑M2/27‑1 (MQ=255) acgaacagaaccaccgccatcgacgacaagaacacgaccacggccattctgttcgagcagatcgtacagcaacccgttgtcctcgaaacattttaccgtgattatttgtccgccaaaGTTGGAGAACAGCGGTTCCACGACGTTAACAtct < 1:424676‑M2/34‑1 (MQ=255) cgaacagaaccaccgccatcgacgacaagaacacgaccacggccattctgttcgagcagatcgtacagcaacccgttgtcctcgaaacattttaccgtgattatttgtccgccaaaGTTGGAGAACAGCGGTTCCACGACGTTAACAtctt > 2:731748‑M2/117‑151 (MQ=255) aacagaaccaccgccatcgacgacaagaacacgaccacggccattctgttcgagcagatcgtacagcaacccgttgtcctcgaaacattttaccgtgattatttgtccgccaaaGTTGGAGAACAGCGGTTCCACGACGTTAACAtcttct < 2:478565‑M2/37‑1 (MQ=255) cagaaccaccgccatcgacgacaagaacacgaccacggccattctgttcgagcagatcgtacagcaacccgttgtcctcgaaacattttaccgtgattatttgtccgccaaaGTTGGAGAACAGCGGTTCCACGACGTTAACATCTTCTTg < 2:958299‑M2/39‑1 (MQ=255) agaaccaccgccatcgacgacaagaacacgaccacggccattctgttcgagcagatcgtacagcaacccgttgtcctcgaaacattttaccgtgattatttgtccgccaaaGTTGGAGAACAGCGGTTCCACGACGTTAACATCTTCTTg > 1:250248‑M2/112‑150 (MQ=255) agaaccaccgccatcgacgacaagaacacgaccacggccattctgttcgagcagatcgtacagcaacccgttgtcctcgaaacattttaccgtgattatttgtccgccaaaGTTGGAGAACAGCGGTTCCACGACGTTAACATCTTCTTg > 1:577018‑M2/112‑150 (MQ=255) accgccatcgacgacaagaacacgaccacggccattctgttcgagcagatcgtacagcaacccgttgtcctcgaaacattttaccgtgattatttgtccgccaaaGTTGGAGAACAGCGGTTCCACGACGTTAACATCTTCTTGATAGATg > 2:427596‑M2/106‑151 (MQ=255) acacGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAACGACGCCCGTCCGCCAAAGTTGGAGAACAGCGGTTCCACGACGTTAACATCTTCTTGATAGATGt > 2:834414/1‑151 (MQ=255) gccatcgacgacaagaacacgaccacggccattctgttcgagcagatcgtacagcaacccgttgtcctcgaaacattttaccgtgattatttgtccgccaaaGTTGGAGAACAGCGGTTCCACGACGTTAACATCTTCTTGATAGATGTca < 2:314306‑M2/49‑1 (MQ=255) catcgacgacaagaacacgaccacggccattctgttcgagcagatcgtacagcaacccgttgtcctcgaaacattttaccgtgattatttgtccgccaaaGTTGGAGAACAGCGGTTCCACGACGTTAACATCTTCTTGATAGATGTcaca < 1:460351‑M2/51‑1 (MQ=255) catcgacgacaagaacacgaccacggccattctgttcgagcagatcgtacagcaacccgttgtcctcgaaacattttaccgtgattatttgtccgccaaaGTTGGAGAACAGCGGTTCCACGACGTTAACATCTTCTTGATAGATGTcac > 1:246803‑M2/101‑150 (MQ=255) cgacgacaagaacacgaccacggccattctgttcgagcagatcgtacagcaacccgttgtcctcgaaacattttaccgtgattatttgtccgccaaaGTTGGAGAACAGCGGTTCCACGACGTTAACATCTTCTTGATAGATGTCACAAAg < 1:344381‑M2/54‑1 (MQ=255) gacgacaagaacacgaccacggccattctgttcgagcagatcgtacagcaacccgttgtcctcgaaacattttaccgtgattatttgtccgccaaaGTTGGAGAACAGCGGTTCCACGACGTTAACATCTTCTTGATAGATGTCACAAAGc < 2:680844‑M2/55‑1 (MQ=255) acgaccacggccattctgttcgagcagatcgtacagcaacccgttgtcctcgaaacattttaccgtgattatttgtccgccaaaGTTGGAGAACAGCGGTTCCACGACGTTAACATCTTCTTGATAGATGTCACAAAGCTCGGAAGTATCg < 2:464243‑M2/67‑1 (MQ=255) cacggccattctgttcgagcagatcgtacagcaacccgttgtcctcgaaacattttaccgtgattatttgtccgccaaaGTTGGAGAACAGCGGTTCCACGACGTTAACATCTTCTTGATAGATGTCACAAAGCTCGGAAGTATCGTAttt < 2:439848‑M2/72‑1 (MQ=255) ggccattctgttcgagcagatcgtacagcaacccgttgtcctcgaaacattttaccgtgattatttgtccgccaaaGTTGGAGAACAGCGGTTCCACGACGTTAACATCTTCTTGATAGATGTCACAAAGCTCGGAAGTATCGTATTTCAt < 1:865831‑M2/75‑1 (MQ=255) ccattctgttcgagcagatcgtacagcaacccgttgtcctcgaaacattttaccgtgattatttgtccgccaaaGTTGGAGAACAGCGGTTCCACGACGTTAACATCTTCTTGATAGATGTCACAAAGCTCGGAAGTATCGTATTTCAt > 1:909045‑M2/75‑149 (MQ=255) gttcgagcagatcgtacagcaacccgttgtcctcgaaacattttaccgtgattatttgtccgccaaaGTTGGAGAACAGCGGTTCCACGACGTTAACATCTTCTTGATAGATGTCACAAAGCTCGGAAGTATCGTATTTCATAGGCTTa < 1:764271‑M2/82‑1 (MQ=255) gttcgagcagatcgtacagcaacccgttgtcctcgaaacattttaccgtgattatttgtccgccaaaGTTGGAGAACAGCGGTTCCACGACGTTAACATCTTCTTGATAGATGTCACAAAGCTCGGAAGTATCGTATTTCATAGGCTTAAc > 2:951787‑M2/68‑151 (MQ=255) cgagcagatcgtacagcaacccgttgtcctcgaaacattttaccgtgattatttgtccgccaaaGTTGGAGAACAGCGGTTCCACGACGTTAACATCTTCTTGATAGATGTCACAAAGCTCGGAAGTATCGTATTTCATAGGCTTAACAtt < 1:457801‑M2/87‑1 (MQ=255) cgagcagatcgtacagcaacccgttgtcctcgaaacattttaccgtgattatttgtccgccaaaGTTGGAGAACAGCGGTTCCACGACGTTAACATCTTCTTGATAGATGTCACAAAGCTCGGAAGTATCGTATTTCATAGGCTTAACAt < 1:951910‑M2/86‑1 (MQ=255) agatcgtacagcaacccgttgtcctcgaaacattttaccgtgattatttgtccgccaaaGTTGGAGAACAGCGGTTCCACGACGTTAACATCTTCTTGATAGATGTCACAAAGCTCGGAAGTATCGTATTTCATAGGCTTAACATTCAGtt < 2:205273‑M2/92‑1 (MQ=255) tcgtacagcaacccgttgtcctcgaaacattttaccgtgattatttgtccgccaaaGTTGGAGAACAGCGGTTCCACGACGTTAACATCTTCTTGATAGATGTCACAAAGCTCGGAAGTATCGTATTTCATAGGCTTAACATTCAGTtgct > 1:183025‑M2/57‑151 (MQ=255) gtacagcaacccgttgtcctcgaaacattttaccgtgattatttgtccgccaaaGTTGGAGAACAGCGGTTCCACGACGTTAACATCTTCTTGATAGATGTCACAAAGCTCGGAAGTATCGTATTTCATAGGCTTAACATTCAGTtgctgc < 1:52027‑M2/97‑1 (MQ=255) gtacagcaacccgttgtcctcgaaacattttaccgtgattatttgtccgccaaaGTTGGAGAACAGCGGTTCCACGACGTTAACATCTTCTTGATAGATGTCACAAAGCTCGGAAGTATCGTATTTCATAGGCTTAACATTCAGTtgctgc < 1:190033‑M2/97‑1 (MQ=255) cagcaacccgttgtcctcgaaacattttaccgtgattatttgtccgccaaaGTTGGAGAACAGCGGTTCCACGACGTTAACATCTTCTTGATAGATGTCACAAAGCTCGGAAGTATCGTATTTCATAGGCTTAACATTCAGTTGCTGCgag < 2:228503‑M2/100‑1 (MQ=255) acccgttgtcctcgaaacattttaccgtgattatttgtccgccaaaGTTGGAGAACAGCGGTTCCACGACGTTAACATCTTCTTGATAGATGTCACAAAGCTCGGAAGTATCGTATTTCATAGGCTTAACATTCAGTTGCTGCGAGAAttt < 1:185745‑M2/105‑1 (MQ=255) ttACCGTGATTATTTGTCCGCCAAACGACGCCCGTCCGCCAAAGTTGGAGAACAGCGGTTCCACGACGTTAACATCTTCTTGATAGATGTCACAAAGCTCGGAAGTATCGTATTTCATAGGCTTAACATTCAGTTGCTGCGAGAATTTTc < 1:266817/150‑1 (MQ=255) ttgtcctcgaaacattttaccgtgattatttgtccgccaaaGTTGGAGAACAGCGGTTCCACGACGTTAACATCTTCTTGATAGATGTCACAAAGCTCGGAAGTATCGTATTTCATAGGCTTAACATTCAGTTGCTGCGAGAATTTTCAGt > 1:682053‑M2/42‑151 (MQ=255) gtcctcgaaacattttaccgtgattatttgtccgccaaaGTTGGAGAACAGCGGTTCCACGACGTTAACATCTTCTTGATAGATGTCACAAAGCTCGGAAGTATCGTATTTCATAGGCTTAACATTCAGTTGCTGCGAGAATTTTCAGta < 1:788985‑M2/111‑1 (MQ=255) cgaaacattttaccgtgattatttgtccgccaaaGTTGGAGAACAGCGGTTCCACGACGTTAACATCTTCTTGATAGATGTCACAAAGCTCGGAAGTATCGTATTTCATAGGCTTAACATTCAGTTGCTGCGAGAATTTTCAGTATATcgc > 2:735795‑M2/35‑151 (MQ=255) cgaaacattttaccgtgattatttgtccgccaaaGTTGGAGAACAGCGGTTCCACGACGTTAACATCTTCTTGATAGATGTCACAAAGCTCGGAAGTATCGTATTTCATAGGCTTAACATTCAGTTGCTGCGAGAATTTTCAGTATATcg < 2:223580‑M2/116‑1 (MQ=255) aacattttaccgtgattatttgtccgccaaaGTTGGAGAACAGCGGTTCCACGACGTTAACATCTTCTTGATAGATGTCACAAAGCTCGGAAGTATCGTATTTCATAGGCTTAACATTCAGTTGCTGCGAGAATTTTCAGTATATCGCGCt > 2:563511‑M2/32‑151 (MQ=255) aacattttaccgtgattatttgtccgccaaaGTTGGAGAACAGCGGTTCCACGACGTTAACATCTTCTTGATAGATGTCACAAAGCTCGGAAGTATCGTATTTCATAGGCTTAACATTCAGTTGCTGCGAGAATTTTCAGTATATCGCGCt > 1:811479‑M2/32‑151 (MQ=255) acattttaccgtgattatttgtccgccaaaGTTGGAGAACAGCGGTTCCACGACGTTAACATCTTCTTGATAGATGTCACAAAGCTCGGAAGTATCGTATTTCATAGGCTTAACATTCAGTTGCTGCGAGAATTTTCAGTATATCGCGCt > 2:312703‑M2/31‑150 (MQ=255) acattttaccgtgattatttgtccgccaaaGTTGGAGAACAGCGGTTCCACGACGTTAACATCTTCTTGATAGATGTCACAAAGCTCGGAAGTATCGTATTTCATAGGCTTAACATTCAGTTGCTGCGAGAATTTTCAGTATATCGCGCTa < 2:160471‑M2/121‑1 (MQ=255) cattttaccgtgattatttgtccgccaaaGTTGGAGAACAGCGGTTCCACGACGTTAACATCTTCTTGATAGATGTCACAAAGCTCGGAAGTATCGTATTTCATAGGCTTAACATTCAGTTGCTGCGAGAATTTTCAGTATATCGCGCTAt < 2:885633‑M2/122‑1 (MQ=255) attttaccgtgattatttgtccgccaaaGTTGGAGAACAGCGGTTCCACGACGTTAACATCTTCTTGATAGATGTCACAAAGCTCGGAAGTATCGTATTTCATAGGCTTAACATTCAGTTGCTGCGAGAATTTTCAGTATATCGCGCTAtg > 1:224216‑M2/29‑151 (MQ=255) ttttaccgtgattatttgtccgccaaaGTTGGAGAACAGCGGTTCCACGACGTTAACATCTTCTTGATAGATGTCACAAAGCTCGGAAGTATCGTATTTCATAGGCTTAACATTCAGTTGCTGCGAGAATTTTCAGTATATCGCGCTAtgt > 2:750163‑M2/28‑151 (MQ=255) tttaccgtgattatttgtccgccaaaGTTGGAGAACAGCGGTTCCACGACGTTAACATCTTCTTGATAGATGTCACAAAGCTCGGAAGTATCGTATTTCATAGGCTTAACATTCAGTTGCTGCGAGAATTTTCAGTATATCGCGCTAtgtg > 1:29160‑M2/27‑151 (MQ=255) taccgtgattatttgtccgccaaaGTTGGAGAACAGCGGTTCCACGACGTTAACATCTTCTTGATAGATGTCACAAAGCTCGGAAGTATCGTATTTCATAGGCTTAACATTCAGTTGCTGCGAGAATTTTCAGTATATCGCGCTAtgt > 2:256703‑M2/25‑148 (MQ=255) taccgtgattatttgtccgccaaaGTTGGAGAACAGCGGTTCCACGACGTTAACATCTTCTTGATAGATGTCACAAAGCTCGGAAGTATCGTATTTCATAGGCTTAACATTCAGTTGCTGCGAGAATTTTCAGTATATCGCGCTATGTggg > 1:509920‑M2/25‑151 (MQ=255) accgtgattatttgtccgccaaaGTTGGAGAACAGCGGTTCCACGACGTTAACATCTTCTTGATAGATGTCACAAAGCTCGGAAGTATCGTATTTCATAGGCTTAACATTCAGTTGCTGCGAGAATTTTCAGTATATCGCGCTATGTGGGc > 1:298941‑M2/24‑151 (MQ=255) ccgtgattatttgtccgccaaaGTTGGAGAACAGCGGTTCCACGACGTTAACATCTTCTTGATAGATGTCACAAAGCTCGGAAGTATCGTATTTCATAGGCTTAACATTCAGTTGCTGCGAGAATTTTCAGTATATCGCGCTATGTGGGCt > 1:821830‑M2/23‑151 (MQ=255) cgtgattatttgtccgccaaaGTTGGAGAACAGCGGTTCCACGACGTTAACATCTTCTTGATAGATGTCACAAAGCTCGGAAGTATCGTATTTCATAGGCTTAACATTCAGTTGCTGCGAGAATTTTCAGTATATCGCGCTATGTGGGCTg < 2:621724‑M2/130‑1 (MQ=255) gattatttgtccgccaaaGTTGGAGAACAGCGGTTCCACGACGTTAACATCTTCTTGATAGATGTCACAAAGCTCGGAAGTATCGTATTTCATAGGCTTAACATTCAGTTGCTGCGAGAATTTTCAGTATATCGCGCTATGTGGGCTGtt < 2:912580‑M2/132‑1 (MQ=255) gattatttgtccgccaaaGTTGGAGAACAGCGGTTCCACGACGTTAACATCTTCTTGATAGATGTCACAAAGCTCGGAAGTATCGTATTTCATAGGCTTAACATTCAGTTGCTGCGAGAATTTTCAGTATATCGCGCTATGTGGGCTGTTg < 1:199530‑M2/133‑1 (MQ=255) ttatttgtccgccaaaGTTGGAGAACAGCGGTTCCACGACGTTAACATCTTCTTGATAGATGTCACAAAGCTCGGAAGTATCGTATTTCATAGGCTTAACATTCAGTTGCTGCGAGAATTTTCAGTATATCGCGCTATGTGGGCTGTTGGc > 1:106808‑M2/17‑151 (MQ=255) tatttgtccgccaaaGTTGGAGAACAGCGGTTCCACGACGTTAACATCTTCTTGATAGATGTCACAAAGCTCGGAAGTATCGTATTTCATAGGCTTAACATTCAGTTGCTGCGAGAATTTTCAGTATATCGCGCTATGTGGGCTGTTGGc > 2:685493‑M2/16‑150 (MQ=255) ttgtccgccaaaGTTGGAGAACAGCGGTTCCACGACGTTAACATCTTCTTGATAGATGTCACAAAGCTCGGAAGTATCGTATTTCATAGGCTTAACATTCAGTTGCTGCGAGAATTTTCAGTATATCGCGCTATGTGGGCTGTTGGCaaa < 1:239318‑M2/138‑1 (MQ=255) cgccaaaGTTGGAGAACAGCGGTTCCACGACGTTAACATCTTCTTGATAGATGTCACAAAGCTCGGAAGTATCGTATTTCATAGGCTTAACATTCAGTTGCTGCGAGAATTTTCAGTATATCGCGCTATGTGGGCTGTTGGCAAAatcatc > 1:764624‑M2/8‑151 (MQ=255) gccaaaGTTGGAGAACAGCGGTTCCACGACGTTAACATCTTCTTGATAGATGTCACAAAGCTCGGAAGTATCGTATTTCATAGGCTTAACATTCAGTTGCTGCGAGAATTTTCAGTATATCGCGCTATGTGGGCTGTTGGCAAAAtcatca < 2:662946‑M2/145‑1 (MQ=255) ccaaaGTTGGAGAACAGCGGTTCCACGACGTTAACATCTTCTTGATAGATGTCACAAAGCTCGGAAGTATCGTATTTCATAGGCTTAACATTCAGTTGCTGCGAGAATTTTCAGTATATCGCGCTATGTGGGCTGTTGGCAAAATCATCaa < 1:386539‑M2/146‑1 (MQ=255) aaGTTGGAGAACAGCGGTTCCACGACGTTAACATCTTCTTGATAGATGTCACAAAGCTCGGAAGTATCGTATTTCATAGGCTTAACATTCAGTTGCTGCGAGAATTTTCAGTATATCGCGCTATGTGGGCTGTTGGCAAAATCATCAATTg > 1:258046‑M2/3‑151 (MQ=255) | GTGCGCGACGAACAGAACCACCGCCATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAACGACGCCCGTCCGCCAAAGTTGGAGAACAGCGGTTCCACGACGTTAACATCTTCTTGATAGATGTCACAAAGCTCGGAAGTATCGTATTTCATAGGCTTAACATTCAGTTGCTGCGAGAATTTTCAGTATATCGCGCTATGTGGGCTGTTGGCAAAATCATCAATTG > NC_000913/4119114‑4119404 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |