Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 700,529 IS1 (+) +9 bp coding (1058‑1066/1221 nt) nagC ← N‑acetylglucosamine‑inducible nag divergent operon transcriptional repressor

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 257908 =NA (NA)79 (1.020) 68/298 0.2 100% noncoding (768/768 nt) IS1 repeat region
?NC_000913 700529 = 0 (0.000)coding (1066/1221 nt) nagC N‑acetylglucosamine‑inducible nag divergent operon transcriptional repressor
* ? NC_000913 = 258675NA (NA)62 (0.810) 55/294 0.7 100% noncoding (1/768 nt) IS1 repeat region
?NC_000913 = 700537 0 (0.000)coding (1058/1221 nt) nagC N‑acetylglucosamine‑inducible nag divergent operon transcriptional repressor

Only 100 of 145 total aligned reads displayed.

CAGCAAATGCTGGAGCAAAATACCGTTGAGCATGGCGCGTTTTACCAGCGCAAAAGCGCCGATTGCCGAGCGGTGATCCAGCTCAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACTATCGC  >  NC_000913/700383‑700675
                                                                                                                                                  |                                                                                                                                                  
cAGCAAATGCTGGAGCAAAATACCGTTGAGCATGGCGCGTTTTACCAGCGCAAAAGCGCCGATTGCCGAGCGGTGATCCAGCTCAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATa                                                                                                                                                <  1:1114359/151‑1 (MQ=255)
  gCAAATGCTGGAGCAAAATACCGTTGAGCATGGCGCGTTTTACCAGCGCAAAAGCGCCGATTGCCGAGCGGTGATCCAGCTCAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGc                                                                                                                                              <  2:206454/151‑1 (MQ=255)
    aaaTGCTGGAGCAAAATACCGTTGAGCATGGCGCGTTTTACCAGCGCAAAAGCGCCGATTGCCGAGCGGTGATCCAGCTCAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGc                                                                                                                                              >  2:1147980/1‑149 (MQ=255)
    aaaTGCTGGAGCAAAATACCGTTGAGCATGGCGCGTTTTACCAGCGCAAAAGCGCCGATTGCCGAGCGGTGATCCAGCTCAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAg                                                                                                                                            <  2:574028/151‑1 (MQ=255)
         cTGGAGCAAAATACCGTTGAGCATGGCGCGTTTTACCAGCGCAAAAGCGCCGATTGCCGAGCGGTGATCCAGCTCAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtg                                                                                                                                        <  1:1066406‑M2/150‑5 (MQ=255)
              gCAAAATACCGTTGAGCATGGCGCGTTTTACCAGCGCAAAAGCGCCGATTGCCGAGCGGTGATCCAGCTCAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctg                                                                                                                                  >  1:739124‑M2/1‑141 (MQ=255)
              ctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCAc                                                                                                                                  >  1:147712‑M2/133‑151 (MQ=255)
                 aatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACttt                                                                                                                               <  2:354802‑M2/22‑1 (MQ=255)
                 aaaTACCGTTGAGCATGGCGCGTTTTACCAGCGCAAAAGCGCCGATTGCCGAGCGGTGATCCAGCTCAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgcca                                                                                                                               >  1:1046766‑M2/1‑138 (MQ=255)
                 aaaTACCGTTGAGCATGGCGCGTTTTACCAGCGCAAAAGCGCCGATTGCCGAGCGGTGATCCAGCTCAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgcc                                                                                                                                <  1:698541‑M2/150‑13 (MQ=255)
                   aTACCGTTGAGCATGGCGCGTTTTACCAGCGCAAAAGCGCCGATTGCCGAGCGGTGATCCAGCTCAGAACGTACCACCGGCAGATTAGTGCGAAATGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgcca                                                                                                                               <  2:1103400‑M2/149‑14 (MQ=255)
                     aCCGTTGAGCATGGCGCGTTTTACCAGCGCAAAAGCGCCGATTGCCGAGCGGTGATCCAGCTCAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaactt                                                                                                                           <  2:52154‑M2/151‑18 (MQ=255)
                      ccGTTGAGCATGGCGCGTTTTACCAGCGCAAAAGCGCCGATTGCCGAGCGGTGATCCAGCTCAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaactta                                                                                                                          >  1:514342‑M2/1‑133 (MQ=255)
                      ccGTTGAGCATGGCGCGTTTTACCAGCGCAAAAGCGCCGATTGCCGAGCGGTGATCCAGCTCAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgcca                                                                                                                               >  2:16898‑M2/1‑133 (MQ=255)
                       aggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGc                                                                                                                         <  2:601803‑M2/28‑1 (MQ=255)
                          cagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTc                                                                                                                      <  1:489550‑M2/31‑1 (MQ=255)
                               aTGGCGCGTTTTACCAGCGCAAAAGCGCCGATTGCCGAGCGGTGATCCAGCTCAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgattt                                                                                                                   <  2:946061‑M2/149‑26 (MQ=255)
                                ctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGAt                                                                                                                >  2:951936‑M2/115‑151 (MQ=255)
                                  ggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGAttt                                                                                                              <  1:560823‑M2/39‑1 (MQ=255)
                                     cgTTTTACCAGCGCAAAAGCGCCGATTGCCGAGCGGTGATCCAGCTCAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatg                                                                                                           <  1:19539‑M2/151‑34 (MQ=255)
                                      gTTTTACCAGCGCAAAAGCGCCGATTGCCGAGCGGTGATCCAGCTCAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatga                                                                                                          >  1:1103101‑M2/1‑117 (MQ=255)
                                      gTTTTACCAGCGCAAAAGCGCCGATTGCCGAGCGGTGATCCAGCTCAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatg                                                                                                           <  1:586421‑M2/150‑34 (MQ=255)
                                      cggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCAcc                                                                                                          <  1:843933‑M2/43‑1 (MQ=255)
                                      cggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCAcc                                                                                                          <  1:743731‑M2/43‑1 (MQ=255)
                                         ctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGc                                                                                                       >  1:296039‑M2/106‑151 (MQ=255)
                                           gggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGc                                                                                                       <  1:248713‑M2/46‑1 (MQ=255)
                                             gacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATa                                                                                                   <  2:1023015‑M2/50‑1 (MQ=255)
                                              acggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATaa                                                                                                  <  1:1148036‑M2/51‑1 (MQ=255)
                                              acggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATaa                                                                                                  <  1:444063‑M2/51‑1 (MQ=255)
                                              aGCGCAAAAGCGCCGATTGCCGAGCGGTGATCCAGCTCAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgttt                                                                                                  <  1:807947‑M2/151‑43 (MQ=255)
                                               gcgcAAAAGCGCCGATTGCCGAGCGGTGATCCAGCTCAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgtttt                                                                                                 >  2:717589‑M2/1‑108 (MQ=255)
                                                 gaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACaa                                                                                               <  2:602295‑M2/54‑1 (MQ=255)
                                                 gaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACaa                                                                                               <  2:105529‑M2/54‑1 (MQ=255)
                                                 gaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACa                                                                                                >  1:190895‑M2/98‑150 (MQ=255)
                                                  cAAAAGCGCCGATTGCCGAGCGGTGATCCAGCTCAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgaattagtgtatgatggtgtttttg                                                                                               >  1:1021204‑M2/1‑105 (MQ=255)
                                                   agtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAAtt                                                                                             >  1:551819‑M2/96‑151 (MQ=255)
                                                     tcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAAttt                                                                                            <  1:615772‑M2/57‑1 (MQ=255)
                                                       gctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAAtttttt                                                                                         <  2:640417‑M2/60‑1 (MQ=255)
                                                            cgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCgg                                                                                     <  1:1136681‑M2/64‑1 (MQ=255)
                                                            cgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGa                                                                                    <  2:702544‑M2/65‑1 (MQ=255)
                                                             aTTGCCGAGCGGTGATCCAGCTCAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagt                                                                                   >  2:1098626‑M2/1‑94 (MQ=255)
                                                               tctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGAtt                                                                                  <  2:1024905‑M2/67‑1 (MQ=255)
                                                                   gAGCGGTGATCCAGCTCAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttc                                                                             >  2:656602‑M2/1‑88 (MQ=255)
                                                                   gAGCGGTGATCCAGCTCAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttc                                                                             <  1:130441‑M2/151‑64 (MQ=255)
                                                                    aaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATaa                                                                            <  1:180740‑M2/73‑1 (MQ=255)
                                                                      cGGTGATCCAGCTCAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgt                                                                          <  1:1128705‑M2/151‑67 (MQ=255)
                                                                        cggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTg                                                                        >  2:720689‑M2/75‑151 (MQ=255)
                                                                         ggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTg                                                                        >  1:690041‑M2/74‑150 (MQ=255)
                                                                          gtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGAt                                                                      <  1:1139445‑M2/79‑1 (MQ=255)
                                                                          gtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGAt                                                                      <  2:242242‑M2/79‑1 (MQ=255)
                                                                          gATCCAGCTCAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgttcttgaggtgctccagtggcttctgtttct                                                                      >  1:146087‑M2/1‑81 (MQ=255)
                                                                               gctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCaa                                                                 <  2:313295‑M2/84‑1 (MQ=255)
                                                                                   catgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATg                                                               <  1:394016‑M2/86‑1 (MQ=255)
                                                                                   cAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgt                                                             >  2:812356‑M2/1‑72 (MQ=255)
                                                                                   cAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgt                                                             >  2:586637‑M2/1‑72 (MQ=255)
                                                                                   cAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagct                                                               >  1:669024‑M2/1‑72 (MQ=255)
                                                                                    atgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCg                                                            <  1:71287‑M2/89‑1 (MQ=255)
                                                                                       aCGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccct                                                         >  1:93232‑M2/1‑68 (MQ=255)
                                                                                         gTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcc                                                       >  2:464088‑M2/1‑66 (MQ=255)
                                                                                          aagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGtt                                                      <  1:287871‑M2/95‑1 (MQ=255)
                                                                                            gtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGtttt                                                    <  1:1170586‑M2/97‑1 (MQ=255)
                                                                                            gtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGtttt                                                    <  2:147709‑M2/97‑1 (MQ=255)
                                                                                            gtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGtttt                                                    >  1:89003‑M2/55‑151 (MQ=255)
                                                                                             caccGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgtt                                                   <  2:454386‑M2/151‑90 (MQ=255)
                                                                                             caccGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgtt                                                   >  1:110371‑M2/1‑62 (MQ=255)
                                                                                              catcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTa                                                   <  2:691499‑M2/98‑1 (MQ=255)
                                                                                              accGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttc                                                  <  2:335995‑M2/151‑91 (MQ=255)
                                                                                               ccGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttca                                                 >  2:1124880‑M2/1‑60 (MQ=255)
                                                                                                 ggCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagc                                               >  1:1041415‑M2/1‑58 (MQ=255)
                                                                                                 cgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTACCCa                                               <  2:732845‑M2/102‑1 (MQ=255)
                                                                                                  gggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTAccc                                                >  1:808156‑M2/49‑149 (MQ=255)
                                                                                                   cAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgttactatcagctgtccctcctgttcagcta                                             >  1:1008010‑M2/1‑56 (MQ=255)
                                                                                                      aTTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactg                                          >  2:1058945‑M2/1‑53 (MQ=255)
                                                                                                        tatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATgac                                         <  1:117076‑M2/108‑1 (MQ=255)
                                                                                                         atctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATgacg                                        >  1:462229‑M2/42‑150 (MQ=255)
                                                                                                            tgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATgacga                                       >  2:836272‑M2/39‑148 (MQ=255)
                                                                                                             gaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGAcgaccg                                    <  2:68170‑M2/113‑1 (MQ=255)
                                                                                                               acataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGAcgaccgac                                  >  1:258999‑M2/36‑150 (MQ=255)
                                                                                                                aaCGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggt                                >  2:513491‑M2/1‑43 (MQ=255)
                                                                                                                 ataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACAt                                >  1:408156‑M2/34‑150 (MQ=255)
                                                                                                                 aCGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtg                               <  2:481030‑M2/151‑110 (MQ=255)
                                                                                                                 aCGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtg                               <  2:774409‑M2/151‑110 (MQ=255)
                                                                                                                  taaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATAc                              >  1:534733‑M2/33‑151 (MQ=255)
                                                                                                                       cactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAAt                         >  2:1401‑M2/28‑151 (MQ=255)
                                                                                                                        actatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAAtt                        <  2:397992‑M2/125‑1 (MQ=255)
                                                                                                                         aGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacgg                       <  1:66053‑M2/151‑118 (MQ=255)
                                                                                                                          tatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTAc                      >  1:470634‑M2/25‑151 (MQ=255)
                                                                                                                           atcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACt                     >  1:967210‑M2/24‑151 (MQ=255)
                                                                                                                              aataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTcc                  >  2:21590‑M2/21‑151 (MQ=255)
                                                                                                                              aataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTcc                  <  2:351238‑M2/131‑1 (MQ=255)
                                                                                                                                 ggTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagc                <  1:919579‑M2/150‑125 (MQ=255)
                                                                                                                                 ggTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagc                <  2:806232‑M2/150‑125 (MQ=255)
                                                                                                                                    aTTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcacc             >  1:509966‑M2/1‑23 (MQ=255)
                                                                                                                                      tAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgc           <  1:1198047‑M2/150‑130 (MQ=255)
                                                                                                                                      ggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGcc            >  2:329846‑M2/13‑149 (MQ=255)
                                                                                                                                       gagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGa         <  2:1150508‑M2/140‑1 (MQ=255)
                                                                                                                                        aTGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccgg        <  2:873789‑M2/151‑133 (MQ=255)
                                                                                                                                          tcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACt       >  1:612885‑M2/9‑150 (MQ=255)
                                                                                                                                            attaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGTCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACTATc    <  2:571279‑M2/145‑1 (MQ=255)
                                                                                                                                               accCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACTATCGc  <  1:461200‑M2/147‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                  
CAGCAAATGCTGGAGCAAAATACCGTTGAGCATGGCGCGTTTTACCAGCGCAAAAGCGCCGATTGCCGAGCGGTGATCCAGCTCAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACTATCGC  >  NC_000913/700383‑700675

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.