Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 700,529 IS1 (+) +9 bp coding (1058‑1066/1221 nt) nagC ← N‑acetylglucosamine‑inducible nag divergent operon transcriptional repressor

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 257908 =NA (NA)79 (1.020) 68/298 0.2 100% noncoding (768/768 nt) IS1 repeat region
?NC_000913 700529 = 0 (0.000)coding (1066/1221 nt) nagC N‑acetylglucosamine‑inducible nag divergent operon transcriptional repressor
* ? NC_000913 = 258675NA (NA)62 (0.810) 55/294 0.7 100% noncoding (1/768 nt) IS1 repeat region
?NC_000913 = 700537 0 (0.000)coding (1058/1221 nt) nagC N‑acetylglucosamine‑inducible nag divergent operon transcriptional repressor

Only 100 of 146 total aligned reads displayed.

AAATGCTGGAGCAAAATACCGTTGAGCATGGCGCGTTTTACCAGCGCAAAAGCGCCGATTGCCGAGCGGTGATCCAGCTCAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACTATCGCCTTTGTTCGC  >  NC_000913/700387‑700685
                                                                                                                                                      |                                                                                                                                                    
     cTGGAGCAAAATACCGTTGAGCATGGCGCGTTTTACCAGCGCAAAAGCGCCGATTGCCGAGCGGTGATCCAGCTCAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtg                                                                                                                                                  <  1:1066406‑M2/150‑5 (MQ=255)
          gCAAAATACCGTTGAGCATGGCGCGTTTTACCAGCGCAAAAGCGCCGATTGCCGAGCGGTGATCCAGCTCAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctg                                                                                                                                            >  1:739124‑M2/1‑141 (MQ=255)
          ctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCAc                                                                                                                                            >  1:147712‑M2/133‑151 (MQ=255)
            aaaaTACCGTTGAGCATGGCGCGTTTTACCAGCGCAAAAGCGCCGATTGCCGAGCGGTGATCCAGCTCAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgcc                                                                                                                                          <  2:1021521‑M2/151‑13 (MQ=255)
             aaaTACCGTTGAGCATGGCGCGTTTTACCAGCGCAAAAGCGCCGATTGCCGAGCGGTGATCCAGCTCAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgcca                                                                                                                                         >  1:1046766‑M2/1‑138 (MQ=255)
             aaaTACCGTTGAGCATGGCGCGTTTTACCAGCGCAAAAGCGCCGATTGCCGAGCGGTGATCCAGCTCAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgcc                                                                                                                                          <  1:698541‑M2/150‑13 (MQ=255)
               aTACCGTTGAGCATGGCGCGTTTTACCAGCGCAAAAGCGCCGATTGCCGAGCGGTGATCCAGCTCAGAACGTACCACCGGCAGATTAGTGCGAAATGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgcca                                                                                                                                         <  2:1103400‑M2/149‑14 (MQ=255)
                  ccGTTGAGCATGGCGCGTTTTACCAGCGCAAAAGCGCCGATTGCCGAGCGGTGATCCAGCTCAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgcca                                                                                                                                         >  2:16898‑M2/1‑133 (MQ=255)
                         cacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGt                                                                                                                             >  1:263097‑M2/118‑151 (MQ=255)
                           aTGGCGCGTTTTACCAGCGCAAAAGCGCCGATTGCCGAGCGGTGATCCAGCTCAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgattt                                                                                                                             <  2:946061‑M2/149‑26 (MQ=255)
                            ctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGAt                                                                                                                          >  2:951936‑M2/115‑151 (MQ=255)
                              ggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGAttt                                                                                                                        <  1:560823‑M2/39‑1 (MQ=255)
                               gcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTc                                                                                                                       <  2:345905‑M2/40‑1 (MQ=255)
                               gcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTc                                                                                                                       <  1:504587‑M2/40‑1 (MQ=255)
                                gcgTTTTACCAGCGCAAAAGCGCCGATTGCCGAGCGGTGATCCAGCTCAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtat                                                                                                                      <  2:1116357‑M2/151‑33 (MQ=255)
                                 cgTTTTACCAGCGCAAAAGCGCCGATTGCCGAGCGGTGATCCAGCTCAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatg                                                                                                                     <  1:19539‑M2/151‑34 (MQ=255)
                                  gTTTTACCAGCGCAAAAGCGCCGATTGCCGAGCGGTGATCCAGCTCAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatga                                                                                                                    >  1:1103101‑M2/1‑117 (MQ=255)
                                    gctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCgg                                                                                                                  >  2:698472‑M2/107‑151 (MQ=255)
                                       gggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGc                                                                                                                 <  1:248713‑M2/46‑1 (MQ=255)
                                        ggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAAt                                                                                                              <  1:533194‑M2/49‑1 (MQ=255)
                                          acggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATaa                                                                                                            <  1:1148036‑M2/51‑1 (MQ=255)
                                          acggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATaa                                                                                                            <  1:444063‑M2/51‑1 (MQ=255)
                                             gaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACaa                                                                                                         <  2:602295‑M2/54‑1 (MQ=255)
                                             gaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACa                                                                                                          >  1:190895‑M2/98‑150 (MQ=255)
                                              cAAAAGCGCCGATTGCCGAGCGGTGATCCAGCTCAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttg                                                                                                         <  1:112936‑M2/150‑46 (MQ=255)
                                              cAAAAGCGCCGATTGCCGAGCGGTGATCCAGCTCAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgaattagtgtatgatggtgtttttg                                                                                                         >  1:1021204‑M2/1‑105 (MQ=255)
                                                 tcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAAttt                                                                                                      <  1:615772‑M2/57‑1 (MQ=255)
                                                     tgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGc                                                                                                 >  2:1031357‑M2/90‑151 (MQ=255)
                                                        cgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGa                                                                                              <  2:702544‑M2/65‑1 (MQ=255)
                                                           tctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGAtt                                                                                            <  2:1024905‑M2/67‑1 (MQ=255)
                                                             ccGAGCGGTGATCCAGCTCAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggct                                                                                         >  2:527341‑M2/1‑90 (MQ=255)
                                                               gAGCGGTGATCCAGCTCAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttc                                                                                       >  2:656602‑M2/1‑88 (MQ=255)
                                                               gAGCGGTGATCCAGCTCAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttc                                                                                       <  1:130441‑M2/151‑64 (MQ=255)
                                                                aaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATaa                                                                                      <  1:180740‑M2/73‑1 (MQ=255)
                                                                  cGGTGATCCAGCTCAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgt                                                                                    <  1:1128705‑M2/151‑67 (MQ=255)
                                                                  atcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGt                                                                                    <  1:156435‑M2/75‑1 (MQ=255)
                                                                    cggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTg                                                                                  >  2:720689‑M2/75‑151 (MQ=255)
                                                                      gtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGAt                                                                                <  2:242242‑M2/79‑1 (MQ=255)
                                                                      gtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGAt                                                                                <  1:1139445‑M2/79‑1 (MQ=255)
                                                                      gtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGAt                                                                                <  2:385690‑M2/79‑1 (MQ=255)
                                                                      gATCCAGCTCAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttct                                                                                >  2:600388‑M2/1‑81 (MQ=255)
                                                                           gctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCaa                                                                           <  2:313295‑M2/84‑1 (MQ=255)
                                                                              gcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATgg                                                                        <  2:123989‑M2/87‑1 (MQ=255)
                                                                               catgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATg                                                                         <  1:394016‑M2/86‑1 (MQ=255)
                                                                               cAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgt                                                                       >  2:586637‑M2/1‑72 (MQ=255)
                                                                               cAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgt                                                                       >  2:812356‑M2/1‑72 (MQ=255)
                                                                               cAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagct                                                                         >  1:669024‑M2/1‑72 (MQ=255)
                                                                                   aCGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccct                                                                   <  2:162973‑M2/151‑84 (MQ=255)
                                                                                     gTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcc                                                                 >  2:464088‑M2/1‑66 (MQ=255)
                                                                                      aagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGtt                                                                <  1:287871‑M2/95‑1 (MQ=255)
                                                                                        gtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGtttt                                                              <  1:1170586‑M2/97‑1 (MQ=255)
                                                                                        gtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGtttt                                                              >  1:696289‑M2/55‑151 (MQ=255)
                                                                                        gtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGtttt                                                              >  1:89003‑M2/55‑151 (MQ=255)
                                                                                         caccGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgtt                                                             >  1:110371‑M2/1‑62 (MQ=255)
                                                                                          catcgggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTa                                                             <  2:691499‑M2/98‑1 (MQ=255)
                                                                                             ggCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagc                                                         >  1:1041415‑M2/1‑58 (MQ=255)
                                                                                              gggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTAccc                                                          >  1:808156‑M2/49‑149 (MQ=255)
                                                                                               ggcattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGa                                                       <  2:1083413‑M2/104‑1 (MQ=255)
                                                                                               cAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgttactatcagctgtccctcctgttcagcta                                                       >  1:1008010‑M2/1‑56 (MQ=255)
                                                                                                 cattatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATg                                                     <  2:604298‑M2/106‑1 (MQ=255)
                                                                                                  aTTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactg                                                    >  1:1186808‑M2/1‑53 (MQ=255)
                                                                                                  aTTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactg                                                    >  2:1058945‑M2/1‑53 (MQ=255)
                                                                                                    tatctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATgac                                                   <  1:117076‑M2/108‑1 (MQ=255)
                                                                                                    tAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgagttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtcccgcctgttcagctactga                                                   >  2:729430‑M2/1‑51 (MQ=255)
                                                                                                     atctgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATgacg                                                  >  1:462229‑M2/42‑150 (MQ=255)
                                                                                                      gTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacgg                                                >  1:314201‑M2/1‑49 (MQ=255)
                                                                                                        tgaacataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATgacga                                                 >  2:836272‑M2/39‑148 (MQ=255)
                                                                                                           acataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGAcgaccgac                                            >  1:593711‑M2/36‑150 (MQ=255)
                                                                                                            aaCGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggt                                          >  2:513491‑M2/1‑43 (MQ=255)
                                                                                                             ataaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACAt                                          >  1:408156‑M2/34‑150 (MQ=255)
                                                                                                             aCGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtg                                         <  2:774409‑M2/151‑110 (MQ=255)
                                                                                                             aCGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtg                                         <  2:481030‑M2/151‑110 (MQ=255)
                                                                                                              taaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATAc                                        >  1:534733‑M2/33‑151 (MQ=255)
                                                                                                               gCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcg                                       >  1:921391‑M2/1‑40 (MQ=255)
                                                                                                               aaaacactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACt                                       >  1:56017‑M2/32‑151 (MQ=255)
                                                                                                                   cactatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAAt                                   >  2:1401‑M2/28‑151 (MQ=255)
                                                                                                                    actatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAAtt                                  <  2:397992‑M2/125‑1 (MQ=255)
                                                                                                                     aGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacgg                                 <  1:66053‑M2/151‑118 (MQ=255)
                                                                                                                      tatcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTAc                                >  1:470634‑M2/25‑151 (MQ=255)
                                                                                                                       cgcCTGGGTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggca                               >  1:829189‑M2/1‑32 (MQ=255)
                                                                                                                       atcaataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACt                               >  1:967210‑M2/24‑151 (MQ=255)
                                                                                                                         caataaggtggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTTCCCAGATGACGACCGACATACTCAATTa                                 <  2:509429‑M2/126‑1 (MQ=255)
                                                                                                                          aataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTcc                            <  2:351238‑M2/131‑1 (MQ=255)
                                                                                                                          aataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTcc                            >  2:21590‑M2/21‑151 (MQ=255)
                                                                                                                           ataagttggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCg                           <  1:137657‑M2/132‑1 (MQ=255)
                                                                                                                            gggTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaa                            >  1:716254‑M2/1‑27 (MQ=255)
                                                                                                                             ggTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagc                          <  1:919579‑M2/150‑125 (MQ=255)
                                                                                                                             ggTATTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagc                          <  2:806232‑M2/150‑125 (MQ=255)
                                                                                                                                aTTAATGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcacc                       >  1:509966‑M2/1‑23 (MQ=255)
                                                                                                                                  ggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGcc                      >  2:329846‑M2/13‑149 (MQ=255)
                                                                                                                                  ggagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGcc                      >  2:461355‑M2/13‑149 (MQ=255)
                                                                                                                                   gagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGcc                      >  2:661864‑M2/12‑148 (MQ=255)
                                                                                                                                   gagtcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGa                   <  2:1150508‑M2/140‑1 (MQ=255)
                                                                                                                                    aTGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccgg                  <  2:873789‑M2/151‑133 (MQ=255)
                                                                                                                                     tGCAGCTTTCAATAGCAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccgg                  <  1:763755‑M2/150‑133 (MQ=255)
                                                                                                                                      tcattaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACt                 >  1:612885‑M2/9‑150 (MQ=255)
                                                                                                                                        attaccCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGTCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACTATc              <  2:571279‑M2/145‑1 (MQ=255)
                                                                                                                                           accCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACTATCGc            <  1:461200‑M2/147‑1 (MQ=255)
                                                                                                                                                   gCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACTATCGCCTTTGTTcg   <  2:777783/151‑1 (MQ=255)
                                                                                                                                                    cAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACTATCGCCTTTGTTcgc  <  1:747803/151‑1 (MQ=255)
                                                                                                                                                      |                                                                                                                                                    
AAATGCTGGAGCAAAATACCGTTGAGCATGGCGCGTTTTACCAGCGCAAAAGCGCCGATTGCCGAGCGGTGATCCAGCTCAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACTATCGCCTTTGTTCGC  >  NC_000913/700387‑700685

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.