| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 4,398,054 | Δ7 bp | coding (643‑649/1848 nt) | mutL → | methyl‑directed mismatch repair protein |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 4398054 | 4398060 | 7 | 52 [0] | [0] 52 | mutL | methyl‑directed mismatch repair protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4398053 | 0 (0.000) | 52 (1.070) | 48/292 | 0.1 | 100% | coding (642/1848 nt) | mutL | methyl‑directed mismatch repair protein |
| ? | NC_000913 | 4398061 = | 0 (0.000) | coding (650/1848 nt) | mutL | methyl‑directed mismatch repair protein | |||||
AAACCGAATTTAACCACATTGATGAGATCATCCGCCGCATTGCGCTGGCGCGTTTCGACGTCACGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTCACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATG > NC_000913/4397905‑4398200 | aaaCCGAATTTAACCACATTGATGAGATCATCCGCCGCATTGCGCTGGCGCGTTTCGACGTCACGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgc > 2:540820‑M1/1‑149 (MQ=255) aCCGAATTTAACCACATTGATGAGATCATCCGCCGCATTGCGCTGGCGCGTTTCGACGTCACGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcac < 2:153532‑M1/151‑5 (MQ=255) ccGAATTTAACCACATTGATGAGATCATCCGCCGCATTGCGCTGGCGCGTTTCGACGTCACGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcacc < 2:320630‑M1/151‑6 (MQ=255) aaTTTAACCACATTGATGAGATCATCCGCCGCATTGCGCTGGCGCGTTTCGACGTCACGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgct > 2:179372‑M1/1‑143 (MQ=255) aaTTTAACCACATTGATGAGATCATCCGCCGCATTGCGCTGGCGCGTTTCGACGTCACGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgct > 2:70748‑M1/1‑143 (MQ=255) aaTTTAACCACATTGATGAGATCATCCGCCGCATTGCGCTGGCGCGTTTCGACGTCACGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgct < 2:131149‑M1/151‑9 (MQ=255) aaTTTAACCACATTGATGAGATCATCCGCCGCATTGCGCTGGCGCGTTTCGACGTCACGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgct > 2:193155‑M1/1‑143 (MQ=255) aaTTTAACCACATTGATGAGATCATCCGCCGCATTGCGCTGGCGCGTTTCGACGTCACGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgct > 2:353925‑M1/1‑143 (MQ=255) tttAACCACATTGATGAGATCATCCGCCGCATTGCGCTGGCGCGTTTCGACGTCACGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgctt < 1:465385‑M1/150‑10 (MQ=255) acaTTGATGAGATCATCCGCCGCATTGCGCTGGCGCGTTTCGACGTCACGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttga > 2:558634‑M1/1‑134 (MQ=255) caTTGATGAGATCATCCGCCGCATTGCGCTGGCGCGTTTCGACGTCACGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaac < 1:488811‑M1/151‑19 (MQ=255) gatgaGATCATCCGCCGCATTGCGCTGGCGCGTTTCGACGTCACGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagc < 2:705443‑M1/151‑23 (MQ=255) gatgaGATCATCCGCCGCATTGCGCTGGCGCGTTTCGACGTCACGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagc < 1:235302‑M1/151‑23 (MQ=255) gatgaGATCATCCGCCGCATTGCGCTGGCGCGTTTCGACGTCACGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaag < 2:649425‑M1/150‑22 (MQ=255) agaTCATCCGCCGCATTGCGCTGGCGCGTTTCGACGTCACGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctg < 2:66859‑M1/151‑27 (MQ=255) catcCGCCGCATTGCGCTGGCGCGTTTCGACGTCACGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcg < 1:509919‑M1/150‑30 (MQ=255) ccgccgCATTGCGCTGGCGCGTTTCGACGTCACGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattg > 2:241784‑M1/1‑118 (MQ=255) ccgccgCATTGCGCTGGCGCGTTTCGACGTCACGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgatt < 1:523764‑M1/150‑33 (MQ=255) ttGCGCTGGCGCGTTTCGACGTCACGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggca > 2:88725‑M1/1‑110 (MQ=255) gcgcTGGCGCGTTTCGACGTCACGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaaca < 1:575062‑M1/151‑44 (MQ=255) cTGGCGCGTTTCGACGTCACGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacgg > 1:248801‑M1/1‑105 (MQ=255) gcgTTTCGACGTCACGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatc > 1:236348‑M1/1‑100 (MQ=255) ttCGACGTCACGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctca < 2:674374‑M1/150‑55 (MQ=255) cGTCACGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctac > 1:241810‑M1/1‑91 (MQ=255) cACGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcg > 2:487217‑M1/1‑88 (MQ=255) aTCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcggctg < 2:722314‑M1/151‑68 (MQ=255) tCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcggctgg > 2:360845‑M1/1‑83 (MQ=255) tGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcggctgggtggcc > 2:530104‑M1/1‑77 (MQ=255) gTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcggctgggtggccg > 2:197045‑M1/1‑76 (MQ=255) gCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcggctgggtggccgatc < 2:161149‑M1/151‑79 (MQ=255) aCGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcggctgggtggccgatccaaat > 2:597137‑M1/1‑68 (MQ=255) gTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcggctgggtggccgatccaaatcac > 2:707373‑M1/1‑65 (MQ=255) aaaaTTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcggctgggtggccgatccaaatcacac > 2:551558‑M1/1‑63 (MQ=255) aaaTTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcggctgggtggccgatccaaatcacac < 2:525450‑M1/150‑89 (MQ=255) aTTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcggctgggtggccgatccaaatcacaccac < 2:527329‑M1/151‑92 (MQ=255) gtgCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcggctgggtggccgatccaaatcacaccacgcc < 1:38648‑M1/151‑95 (MQ=255) gCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcggctgggtggccgatccaaatcacaccacgcccg < 1:237046‑M1/151‑97 (MQ=255) gCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcggctgggtggccgatccaaatcacaccacgccc < 1:283875‑M1/150‑96 (MQ=255) cGTCAGTACCGCGCAGTGCCGGAAGGCGGGAAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcggctgggtggccgatccaaatcacaccacgcccgc < 2:671434‑M1/151‑98 (MQ=255) gcgcAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcggctgggtggccgatccaaatcacaccacgcccgcactggcag > 1:344212‑M1/1‑44 (MQ=255) cgcAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcggctgggtggccgatccaaatcacaccacgcccgcactggcagaaa < 1:457220‑M1/151‑109 (MQ=255) cGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcggctgggtggccgatccaaatcacaccacgcccgcactggcagaaattcagtat > 1:565822‑M1/1‑35 (MQ=255) ggAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcggctgggtggccgatccaaatcacaccacgcccgcactggcagaaattcagtatt > 1:741230‑M1/1‑34 (MQ=255) aaGGCGGGCAAAAAGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcggctgggtggccgatccaaatcacaccacgcccgcactggcagaaattcagtattgc > 1:97205‑M1/1‑32 (MQ=255) aGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcggctgggtggccgatccaaatcacaccacgcccgcactggcagaaattcagtattgctacgtgaacggtc > 1:378443‑M1/1‑19 (MQ=255) aGAACGGCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcggctgggtggccgatccaaatcacaccacgcccgcactggcagaaattcagtattgctacgtgaacggtc < 2:763938‑M1/151‑133 (MQ=255) ggCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcggctgggtggccgatccaaatcacaccacgcccgcactggcagaaattcagtattgctacgtgaacggtcgcatg < 1:450960‑M1/151‑138 (MQ=255) ggCGCTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcggctgggtggccgatccaaatcacaccacgcccgcactggcagaaattcagtattgctacgtgaacggtcgcatg > 2:418012‑M1/1‑14 (MQ=255) cgcTTAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcggctgggtggccgatccaaatcacaccacgcccgcactggcagaaattcagtattgctacgtgaacggtcgcatgat > 2:314363‑M1/1‑12 (MQ=255) ttAGGCGCGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcggctgggtggccgatccaaatcacaccacgcccgcactggcagaaattcagtattgctacgtgaacggtcgcatgatgcg > 2:733852‑M1/1‑9 (MQ=255) gcgcGgcaccgcttttcttgaacaagcgctggcgattgaatggcaacacggcgatctcacgctacgcggctgggtggccgatccaaatcacaccacgcccgcactggcagaaattcagtattgctacgtgaacggtcgcatgatgcgcgat < 2:360024‑M1/151‑147 (MQ=255) cgcggcaccgcttttcttgaacaagcgctggcgattgaatggcgacacggcgatctcacgctacgcggctgggtggccgatccaaatcacaccacgcccgcactggcataaattcagtattgctacgtgaacggtcgcatgatgcgcgatc > 2:553563‑M1/1‑4 (MQ=255) | AAACCGAATTTAACCACATTGATGAGATCATCCGCCGCATTGCGCTGGCGCGTTTCGACGTCACGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTCACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATG > NC_000913/4397905‑4398200 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |