Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 4,398,054 Δ7 bp coding (643‑649/1848 nt) mutL → methyl‑directed mismatch repair protein

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 4398054 4398060 7 52 [0] [0] 52 mutL methyl‑directed mismatch repair protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 43980530 (0.000)52 (1.070) 48/292 0.1 100% coding (642/1848 nt) mutL methyl‑directed mismatch repair protein
?NC_000913 4398061 = 0 (0.000)coding (650/1848 nt) mutL methyl‑directed mismatch repair protein

ATTTAACCACATTGATGAGATCATCCGCCGCATTGCGCTGGCGCGTTTCGACGTCACGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTCACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATGCGCGATC  >  NC_000913/4397912‑4398207
                                                                                                                                                     |                                                                                                                                                  
aaaccgaatttaaccacattgatgagatcatccgccgcattgcgctggcgcgtttcgacgtcacgatcaacctgtcgcataacggtaaaattgtgcgtcagtaccgcgcagtgccggaaggcgggcaaaaagaacggcgcttaggcgcgGc                                                                                                                                                   >  2:540820‑M2/150‑151 (MQ=255)
  accgaatttaaccacattgatgagatcatccgccgcattgcgctggcgcgtttcgacgtcacgatcaacctgtcgcataacggtaaaattgtgcgtcagtaccgcgcagtgccggaaggcgggcaaaaagaacggcgcttaggcgcgGCAc                                                                                                                                                 <  2:153532‑M2/4‑1 (MQ=255)
   ccgaatttaaccacattgatgagatcatccgccgcattgcgctggcgcgtttcgacgtcacgatcaacctgtcgcataacggtaaaattgtgcgtcagtaccgcgcagtgccggaaggcgggcaaaaagaacggcgcttaggcgcgGCAcc                                                                                                                                                <  2:320630‑M2/5‑1 (MQ=255)
      aatttaaccacattgatgagatcatccgccgcattgcgctggcgcgtttcgacgtcacgatcaacctgtcgcataacggtaaaattgtgcgtcagtaccgcgcagtgccggaaggcgggcaaaaagaacggcgcttaggcgcgGCACCGCt                                                                                                                                             >  2:179372‑M2/144‑151 (MQ=255)
      aatttaaccacattgatgagatcatccgccgcattgcgctggcgcgtttcgacgtcacgatcaacctgtcgcataacggtaaaattgtgcgtcagtaccgcgcagtgccggaaggcgggcaaaaagaacggcgcttaggcgcgGCACCGCt                                                                                                                                             >  2:70748‑M2/144‑151 (MQ=255)
      aatttaaccacattgatgagatcatccgccgcattgcgctggcgcgtttcgacgtcacgatcaacctgtcgcataacggtaaaattgtgcgtcagtaccgcgcagtgccggaaggcgggcaaaaagaacggcgcttaggcgcgGCACCGCt                                                                                                                                             <  2:131149‑M2/8‑1 (MQ=255)
      aatttaaccacattgatgagatcatccgccgcattgcgctggcgcgtttcgacgtcacgatcaacctgtcgcataacggtaaaattgtgcgtcagtaccgcgcagtgccggaaggcgggcaaaaagaacggcgcttaggcgcgGCACCGCt                                                                                                                                             >  2:193155‑M2/144‑151 (MQ=255)
      aatttaaccacattgatgagatcatccgccgcattgcgctggcgcgtttcgacgtcacgatcaacctgtcgcataacggtaaaattgtgcgtcagtaccgcgcagtgccggaaggcgggcaaaaagaacggcgcttaggcgcgGCACCGCt                                                                                                                                             >  2:353925‑M2/144‑151 (MQ=255)
        tttaaccacattgatgagatcatccgccgcattgcgctggcgcgtttcgacgtcacgatcaacctgtcgcataacggtaaaattgtgcgtcagtaccgcgcagtgccggaaggcgggcaaaaagaacggcgcttaggcgcgGCACCGCtt                                                                                                                                            <  1:465385‑M2/9‑1 (MQ=255)
               acattgatgagatcatccgccgcattgcgctggcgcgtttcgacgtcacgatcaacctgtcgcataacggtaaaattgtgcgtcagtaccgcgcagtgccggaaggcgggcaaaaagaacggcgcttaggcgcgGCACCGCTTTTCTTGa                                                                                                                                     >  2:558634‑M2/135‑150 (MQ=255)
                cattgatgagatcatccgccgcattgcgctggcgcgtttcgacgtcacgatcaacctgtcgcataacggtaaaattgtgcgtcagtaccgcgcagtgccggaaggcgggcaaaaagaacggcgcttaggcgcgGCACCGCTTTTCTTGAAc                                                                                                                                   <  1:488811‑M2/18‑1 (MQ=255)
                    gatgagatcatccgccgcattgcgctggcgcgtttcgacgtcacgatcaacctgtcgcataacggtaaaattgtgcgtcagtaccgcgcagtgccggaaggcgggcaaaaagaacggcgcttaggcgcgGCACCGCTTTTCTTGAACAAgc                                                                                                                               <  2:705443‑M2/22‑1 (MQ=255)
                    gatgagatcatccgccgcattgcgctggcgcgtttcgacgtcacgatcaacctgtcgcataacggtaaaattgtgcgtcagtaccgcgcagtgccggaaggcgggcaaaaagaacggcgcttaggcgcgGCACCGCTTTTCTTGAACAAgc                                                                                                                               <  1:235302‑M2/22‑1 (MQ=255)
                    gatgagatcatccgccgcattgcgctggcgcgtttcgacgtcacgatcaacctgtcgcataacggtaaaattgtgcgtcagtaccgcgcagtgccggaaggcgggcaaaaagaacggcgcttaggcgcgGCACCGCTTTTCTTGAACAAg                                                                                                                                <  2:649425‑M2/21‑1 (MQ=255)
                        agatcatccgccgcattgcgctggcgcgtttcgacgtcacgatcaacctgtcgcataacggtaaaattgtgcgtcagtaccgcgcagtgccggaaggcgggcaaaaagaacggcgcttaggcgcgGCACCGCTTTTCTTGAACAAGCGCTg                                                                                                                           <  2:66859‑M2/26‑1 (MQ=255)
                            catccgccgcattgcgctggcgcgtttcgacgtcacgatcaacctgtcgcataacggtaaaattgtgcgtcagtaccgcgcagtgccggaaggcgggcaaaaagaacggcgcttaggcgcgGCACCGCTTTTCTTGAACAAGCGCTGGCg                                                                                                                        <  1:509919‑M2/29‑1 (MQ=255)
                               ccgccgcattgcgctggcgcgtttcgacgtcacgatcaacctgtcgcataacggtaaaattgtgcgtcagtaccgcgcagtgccggaaggcgggcaaaaagaacggcgcttaggcgcgGCACCGCTTTTCTTGAACAAGCGCTGGCGAtt                                                                                                                     <  1:523764‑M2/32‑1 (MQ=255)
                               ccgccgcattgcgctggcgcgtttcgacgtcacgatcaacctgtcgcataacggtaaaattgtgcgtcagtaccgcgcagtgccggaaggcgggcaaaaagaacggcgcttaggcgcgGCACCGCTTTTCTTGAACAAGCGCTGGCGATTg                                                                                                                    >  2:241784‑M2/119‑151 (MQ=255)
                                       ttgcgctggcgcgtttcgacgtcacgatcaacctgtcgcataacggtaaaattgtgcgtcagtaccgcgcagtgccggaaggcgggcaaaaagaacggcgcttaggcgcgGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCa                                                                                                             >  2:88725‑M2/111‑150 (MQ=255)
                                         gcgctggcgcgtttcgacgtcacgatcaacctgtcgcataacggtaaaattgtgcgtcagtaccgcgcagtgccggaaggcgggcaaaaagaacggcgcttaggcgcgGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAaca                                                                                                          <  1:575062‑M2/43‑1 (MQ=255)
                                            ctggcgcgtttcgacgtcacgatcaacctgtcgcataacggtaaaattgtgcgtcagtaccgcgcagtgccggaaggcgggcaaaaagaacggcgcttaggcgcgGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACgg                                                                                                       >  1:248801‑M2/106‑151 (MQ=255)
                                                 gcgtttcgacgtcacgatcaacctgtcgcataacggtaaaattgtgcgtcagtaccgcgcagtgccggaaggcgggcaaaaagaacggcgcttaggcgcgGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGAtc                                                                                                  >  1:236348‑M2/101‑151 (MQ=255)
                                                     ttcgacgtcacgatcaacctgtcgcataacggtaaaattgtgcgtcagtaccgcgcagtgccggaaggcgggcaaaaagaacggcgcttaggcgcgGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTCa                                                                                               <  2:674374‑M2/54‑1 (MQ=255)
                                                          cgtcacgatcaacctgtcgcataacggtaaaattgtgcgtcagtaccgcgcagtgccggaaggcgggcaaaaagaacggcgcttaggcgcgGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTCACGCTAc                                                                                         >  1:241810‑M2/92‑151 (MQ=255)
                                                             cacgatcaacctgtcgcataacggtaaaattgtgcgtcagtaccgcgcagtgccggaaggcgggcaaaaagaacggcgcttaggcgcgGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTCACGCTAcgcg                                                                                      >  2:487217‑M2/89‑151 (MQ=255)
                                                                 atcaacctgtcgcataacggtaaaattgtgcgtcagtaccgcgcagtgccggaaggcgggcaaaaagaacggcgcttaggcgcgGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTCACGCTACGCGGCTg                                                                                  <  2:722314‑M2/67‑1 (MQ=255)
                                                                  tcaacctgtcgcataacggtaaaattgtgcgtcagtaccgcgcagtgccggaaggcgggcaaaaagaacggcgcttaggcgcgGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTCACGCTACGCGGCTgg                                                                                 >  2:360845‑M2/84‑151 (MQ=255)
                                                                        tgtcgcataacggtaaaattgtgcgtcagtaccgcgcagtgccggaaggcgggcaaaaagaacggcgcttaggcgcgGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTCACGCTACGCGGCTGGGTGGcc                                                                           >  2:530104‑M2/78‑151 (MQ=255)
                                                                         gtcgcataacggtaaaattgtgcgtcagtaccgcgcagtgccggaaggcgggcaaaaagaacggcgcttaggcgcgGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTCACGCTACGCGGCTGGGTGGCCg                                                                          >  2:197045‑M2/77‑151 (MQ=255)
                                                                            gcataacggtaaaattgtgcgtcagtaccgcgcagtgccggaaggcgggcaaaaagaacggcgcttaggcgcgGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTCACGCTACGCGGCTGGGTGGCCGATc                                                                       <  2:161149‑M2/78‑1 (MQ=255)
                                                                                 acggtaaaattgtgcgtcagtaccgcgcagtgccggaaggcgggcaaaaagaacggcgcttaggcgcgGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTCACGCTACGCGGCTGGGTGGCCGATCCAAAt                                                                  >  2:597137‑M2/69‑151 (MQ=255)
                                                                                    gtaaaattgtgcgtcagtaccgcgcagtgccggaaggcgggcaaaaagaacggcgcttaggcgcgGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTCACGCTACGCGGCTGGGTGGCCGATCCAAATcac                                                               >  2:707373‑M2/66‑151 (MQ=255)
                                                                                      aaaattgtgcgtcagtaccgcgcagtgccggaaggcgggcaaaaagaacggcgcttaggcgcgGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTCACGCTACGCGGCTGGGTGGCCGATCCAAATCacac                                                             >  2:551558‑M2/64‑151 (MQ=255)
                                                                                       aaattgtgcgtcagtaccgcgcagtgccggaaggcgggcaaaaagaacggcgcttaggcgcgGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTCACGCTACGCGGCTGGGTGGCCGATCCAAATCacac                                                             <  2:525450‑M2/88‑1 (MQ=255)
                                                                                         attgtgcgtcagtaccgcgcagtgccggaaggcgggcaaaaagaacggcgcttaggcgcgGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTCACGCTACGCGGCTGGGTGGCCGATCCAAATCAcaccac                                                          <  2:527329‑M2/91‑1 (MQ=255)
                                                                                            gtgcgtcagtaccgcgcagtgccggaaggcgggcaaaaagaacggcgcttaggcgcgGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTCACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGcc                                                       <  1:38648‑M2/94‑1 (MQ=255)
                                                                                              gcgtcagtaccgcgcagtgccggaaggcgggcaaaaagaacggcgcttaggcgcgGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTCACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGccc                                                      <  1:283875‑M2/95‑1 (MQ=255)
                                                                                              gcgtcagtaccgcgcagtgccggaaggcgggcaaaaagaacggcgcttaggcgcgGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTCACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCg                                                     <  1:237046‑M2/96‑1 (MQ=255)
                                                                                               cgtcagtaccgcgcagtgccggaaggcgggaaaaaagaacggcgcttaggcgcgGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTCACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGc                                                    <  2:671434‑M2/97‑1 (MQ=255)
                                                                                                         gcgcagtgccggaaggcgggcaaaaagaacggcgcttaggcgcgGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTCACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAg                                            >  1:344212‑M2/45‑149 (MQ=255)
                                                                                                          cgcagtgccggaaggcgggcaaaaagaacggcgcttaggcgcgGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTCACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGaaa                                         <  1:457220‑M2/108‑1 (MQ=255)
                                                                                                                  cggaaggcgggcaaaaagaacggcgcttaggcgcgGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTCACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTAt                                 >  1:565822‑M2/36‑151 (MQ=255)
                                                                                                                   ggaaggcgggcaaaaagaacggcgcttaggcgcgGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTCACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTAtt                                >  1:741230‑M2/35‑151 (MQ=255)
                                                                                                                     aaggcgggcaaaaagaacggcgcttaggcgcgGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTCACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGc                              >  1:97205‑M2/33‑151 (MQ=255)
                                                                                                                                  agaacggcgcttaggcgcgGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTCACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTc                 >  1:378443‑M2/20‑151 (MQ=255)
                                                                                                                                  agaacggcgcttaggcgcgGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTCACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTc                 <  2:763938‑M2/132‑1 (MQ=255)
                                                                                                                                       ggcgcttaggcgcgGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTCACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCatg            <  1:450960‑M2/137‑1 (MQ=255)
                                                                                                                                       ggcgcttaggcgcgGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTCACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCatg            >  2:418012‑M2/15‑151 (MQ=255)
                                                                                                                                         cgcttaggcgcgGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTCACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCatgat          >  2:314363‑M2/13‑151 (MQ=255)
                                                                                                                                            ttaggcgcgGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTCACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATgcg       >  2:733852‑M2/10‑151 (MQ=255)
                                                                                                                                                gcgcgGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTCACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATGCGCGAt   <  2:360024‑M2/146‑1 (MQ=255)
                                                                                                                                                 cgcgGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCGACACGGCGATCTCACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCATAAATTCAGTATTGCTACGTGAACGGTCGCATGATGCGCGATc  >  2:553563‑M2/5‑151 (MQ=255)
                                                                                                                                                     |                                                                                                                                                  
ATTTAACCACATTGATGAGATCATCCGCCGCATTGCGCTGGCGCGTTTCGACGTCACGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTCACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATGCGCGATC  >  NC_000913/4397912‑4398207

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: