| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,912,618 | Δ10 bp | coding (1025‑1034/2235 nt) | relA ← | (p)ppGpp synthetase I/GTP pyrophosphokinase |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2912618 | 2912627 | 10 | 53 [0] | [0] 54 | relA | (p)ppGpp synthetase I/GTP pyrophosphokinase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2912617 | 0 (0.000) | 53 (1.080) | 46/284 | 0.2 | 100% | coding (1035/2235 nt) | relA | (p)ppGpp synthetase I/GTP pyrophosphokinase |
| ? | NC_000913 | 2912628 = | 0 (0.000) | coding (1024/2235 nt) | relA | (p)ppGpp synthetase I/GTP pyrophosphokinase | |||||
GGAATCAGCCATCTCTTCCTGCCACGCAATCAGTTTACGCAGCCAGGCAATCCGGTCTTCATGTCCCGAACGTGCGCCGCCAGCAGCCGCGCCCTCTTTATATTTCCAGTGCGCAGCAACACCCAACTCTGCATCTTCATGCATCTGTTTGGTGCGGATTTGGATCTCAACGGTTTTTCCACCCGGCCCCAGAACCACGGTATGAATAGACTGATAACCGTTTGGTTTCGGGTTAGCGACGTAATCGTCAAACTCATCCGGCAGGTGGCGATAGTGAGTGTGCACTATCCCC > NC_000913/2912482‑2912773 | gcatttcgccggaatcagccatctcttcctgccacgcaatcagtttacgcagccaggcaatccggtcttcatgtcccgaacgtgcgccgccagcagccgcgccctctttatatttccagtgcgcagcaacacccaactctgcatctGTTTg > 2:118220‑M2/147‑151 (MQ=255) ccggaatcagccatctcttcctgccacgcaatcagtttacgcagccaggcaatccggtcttcatgtcccgaacgtgcgccgccagcagccgcgccctctttatatttccagtgcgcagcaacacccaactctgcatctGTTTGGTGCGGAt < 1:701054‑M2/13‑1 (MQ=255) cggaatcagccatctcttcctgccacgcaatcagtttacgcagccaggcaatccggtcttcatgtcccgaacgtgcgccgccagcagccgcgccctctttatatttccagtgcgcagcaacacccaactctgcatctGTTTGGTGCGGAtt > 1:593137‑M2/138‑151 (MQ=255) gaatcagccatctcttcctgccacgcaatcagtttacgcagccaggcaatccggtcttcatgtcccgaacgtgcgccgccagcagccgcgccctctttatatttccagtgcgcagcaacacccaactctgcatctGTTTGGTGCGGATTTg < 1:210779‑M2/16‑1 (MQ=255) atcagccatctcttcctgccacgcaatcagtttacgcagccaggcaatccggtcttcatgtcccgaacgtgcgccgccagcagccgcgccctctttatatttccagtgcgcagcaacacccaactctgcatctGTTTGGTGCGgatttcg > 1:710164‑M2/134‑148 (MQ=255) atcagccatctcttcctgccacgcaatcagtttacgcagccaggcaatccggtcttcatgtcccgaacgtgcgccgccagcagccgcgccctctttatatttccagtgcgcagcaacacccaactctgcatctGTTTGGTGCGGATTTgg > 2:459027‑M2/134‑150 (MQ=255) atcagccatctcttcctgccacgcaatcagtttacgcagccaggcaatccggtcttcatgtcccgaacgtgcgccgccagcagccgcgccctctttatatttccagtgcgcagcaacacccaactctgcatctGTTTGGTGCGGATTTGGa < 1:749813‑M2/18‑1 (MQ=255) ccatctcttcctgccacgcaatcagtttacgcagccaggcaatccggtcttcatgtcccgaacgtgcgccgccagcagccgcgccctctttatatttccagtgcgcagcaacacccaactctgcatctGTTTGGTGCGGATTTGGATCTCa < 1:566232‑M2/23‑1 (MQ=255) tctcttcctgccacgcaatcagtttacgcagccaggcaatccggtcttcatgtcccgaacgtgcgccgccagcagccgcgccctctttatatttccagtgcgcagcaacacccaactctgcatctGTTTGGTGCGGATTTGGATCTCAACg > 2:576179‑M2/126‑151 (MQ=255) tcctgccacgcaatcagtttacgcagccaggcaatccggtcttcatgtcccgaacgggcgccgccagcagccgcgccctctttatatttccagtgcgcagcaacacccaactctgcatctGTTTGGTGCGGATTTGGATCTCAACGGtt < 2:810394‑M2/29‑1 (MQ=255) gccacgcaatcagtttacgcagccaggcaatccggtcttcatgtcccgaacgtgcgccgccagcagccgcgccctctttatatttccagtgcgcagcaacacccaactctgcatctGTTTGGTGCGGATTTGGATCTCAACGGTTTTTc < 2:131700‑M2/33‑1 (MQ=255) gccacgcaatcagtttacgcagccaggcaatccggtcttcatgtcccgaacgtgcgccgccagcagccgcgccctctttatatttccagtgcgcagcaacacccaactctgcatctGTTTGGTGCGGATTTGGATCTCAACGGTTTTTc < 1:258373‑M2/33‑1 (MQ=255) gccacgcaatcagtttacgcagccaggcaatccggtcttcatgtcccgaacgtgcgccgccagcagccgcgccctctttatatttccagtgcgcagcaacacccaactctgcatctGTTTGGTGCGGATTTGGATCTCAACGGTTTTTc < 2:593171‑M2/33‑1 (MQ=255) gccacgcaatcagtttacgcagccaggcaatccggtcttcatgtcccgaacgtgcgccgccagcagccgcgccctctttatatttccagtgcgcagcaacacccaactctgcatctGTTTGGTGCGGATTTGGATCTCAACGGTTTTTCCa < 2:468328‑M2/35‑1 (MQ=255) cacgcaatcagtttacgcagccaggcaatccggtcttcatgtcccgaacgtgcgccgccagcagccgcgccctctttatatttccagtgcgcagcaacacccaactctgcatctGTTTGGTGCGGATTTGGATCTCAACGGTTTTTCCAcc < 1:728258‑M2/37‑1 (MQ=255) caatcagtttacgcagccaggcaatccggtcttcatgtcccgaacgtgcgccgccagcagccgcgccctctttatatttccagtgcgcagcaacacccaactctgcatctGTTTGGTGCGGATTTGGATCTCAACGGTTTTTCCACCCGGc > 2:35053‑M2/111‑151 (MQ=255) aatcagtttacgcagccaggcaatccggtcttcatgtcccgaacgtgcgccgccagcagccgcgccctctttatatttccagtgcgcagcaacacccaactctgcatctGTTTGGTGCGGATTTGGATCTCAACGGTTTTTCCACCCGGcc > 2:358878‑M2/110‑151 (MQ=255) gtttacgcagccaggcaatccggtcttcatgtcccgaacgtgcgccgccagcagccgcgccctctttatatttccagtgcgcagcaacacccaactctgcatctGTTTGGTGCGGATTTGGATCTCAACGGTTTTTCCACCCGGcccc > 1:471126‑M2/105‑148 (MQ=255) acgcagccaggcaatccggtcttcatgtcccgaacgtgcgccgccagcagccgcgccctctttatatttccagtgcgcagcaacacccaactctgcatctGTTTGGTGCGGATTTGGATCTCAACGGTTTTTCCACCCGGCCCCAGAAcc > 2:205521‑M2/101‑150 (MQ=255) cgcagccaggcaatccggtcttcatgtcccgaacgggcgccgccagcagccgcgccctctttatatttccagtgcgcagcaacacccaactctgcatctGTTTGGTGCGGATTTGGATCTCAACGGTGTTTCCACCCGGCCCCAGAAcc < 1:16747‑M2/50‑1 (MQ=255) cagccaggcaatccggtcttcatgtcccgaacgtgcgccgccagcagccgcgccctctttatatttccagtgcgcagcaacacccaactctgcatctGTTTGGTGCGGATTTGGATCTCAACGGTTTTTCCACCCGGCCCCAGAACCACgg < 2:555276‑M2/54‑1 (MQ=255) agccaggcaatccggtcttcatgtcccgaacgtgcgccgccagcagccgcgccctctttatatttccagtgcgcagcaacacccaactctgcatctGTTTGGTGCGGATTTGGATCTCAACGGTTTTTCCACCCGGCCCCAGAACCACGGt > 1:438834‑M2/97‑151 (MQ=255) ccaggcaatccggtcttcatgtcccgaacgtgcgccgccagcagccgcgccctctttatatttccagtgcgcagcaacacccaactctgcatctGTTTGGTGCGGATTTGGATCTCAACGGTTTTTCCACCCGGCCCCAGAACCACGGTa > 2:512275‑M2/95‑150 (MQ=255) caggcaatccggtcttcatgtcccgaacgtgcgccgccagcagccgcgccctctttatatttccagtgcgcagcaacacccaactctgcatctGTTTGGTGCGGATTTGGATCTCAACGGTTTTTCCACCCGGCCCCAGAACCACGGTATg < 1:2725‑M2/58‑1 (MQ=255) aatccggtcttcatgtcccgaacgtgcgccgccagcagccgcgccctctttatatttccagtgcgcagcaacacccaactctgcatctGTTTGGTGCGGATTTGGATCTCAACGGTTTTTCCACCCGGCCCCAGAACCACGGTATGAAt > 1:11483‑M2/89‑149 (MQ=255) atccggtcttcatgtcccgaacgtgcgccgccagcagccgcgccctctttatatttccagtgcgcagcaacacccaactctgcatctGTTTGGTGCGGATTTGGATCTCAACGGTTTTTCCACCCGGCCCCAGAACCACGGTATGAAt > 2:390505‑M2/88‑148 (MQ=255) tctggtcttcatgtcccgaacgtgcgccgccagcagccgcgccctctttatatttccagtgcgcagcaacacccaactctgcatctGTTTGGTGCGGATTTGGATCTCAACGGTTTTTCCACCCGGCCCCAGAACCACGGTATGAATAGAc > 2:312023‑M2/87‑151 (MQ=255) ggtcttcatgtcccgaacgtgcgccgccagcagccgcgccctctttatatttccagtgcgcagcaacacccaactctgcatctGTTTGGTGCGGATTTGGATCTCAACGGTTTTTCCACCCGGCCCCAGAACCACGGTATGAATAGACTg > 2:138759‑M2/84‑150 (MQ=255) ggtcttcatgtcccgaacgtgcgccgccagcagccgcgccctctttatatttccagtgcgcagcaacacccaactctgcatctGTTTGGTGCGGATTTGGATCTCAACGGTTTTTCCACCCGGCCCCAGAACCACGGTATGAATAGACTGa < 1:390549‑M2/68‑1 (MQ=255) catgtcccgaacgtgcgccgccagcagccgcgccctctttatatttccagtgcgcagcaacacccaactctgcatctGTTTGGTGCGGATTTGGATCTCAACGGTTTTTCCACCCGGCCCCAGAACCACGGTATGAATAGACTGATAAcc < 2:93657‑M2/73‑1 (MQ=255) catgtcccgaacgtgcgccgccagcagccgcgccctctttatatttccagtgcgcagcaacacccaactctgcatctGTTTGGTGCGGATTTGGATCTCAACGGTTTTTCCACCCGGCCCCAGAACCACGGTATGAATAGACTGATAACCg < 1:27990‑M2/74‑1 (MQ=255) gtcccgaacgtgcgccgccagcagccgcgccctctttatatttccagtgcgcagcaacacccaactctgcatctGTTTGGTGCGGATTTGGATCTCAACGGTTTTTCCACCCGGCCCCAGAACCACGGTATGAATAGACTGATAACCGtt < 2:397316‑M2/76‑1 (MQ=255) cgaacgtgcgccgccagcagccgcgccctctttatatttccagtgcgcagcaacacccaactctgcatctGTTTGGTGCGGATTTGGATCTCAACGGTTTTTCCACCCGGCCCCAGAACCACGGTATGAATAGACTGATAACCGTTTGGtt > 1:401689‑M2/71‑151 (MQ=255) gaacgtgcgccgccagcagccgcgccctctttatatttccagtgcgcagcaacacccaactctgcatctGTTTGGTGCGGATTTGGATCTCAACGTTTTTTCCCCCCGGCCCCAGAACCACGGTATGAATAGACTGATAACCGTTTGGtt < 1:80149‑M2/81‑1 (MQ=255) gcgccgccagcagccgcgccctctttatatttccagtgcgcagcaacacccaactctgcatctGTTTGGTGCGGATTTGGATCTCAACGGTTTTTCCACCCGGCCCCAGAACCACGGTATGAATAGACTGATAACCGTTTGGTTTCGGGt < 1:568389‑M2/87‑1 (MQ=255) cgccgccagcagccgcgccctctttatatttccagtgcgcagcaacacccaactctgcatctGTTTGGTGCGGATTTGGATCTCAACGGTTTTTCAACCCGGCACCAGAACCACGGTATGAATAGACTGATAACCGTTTGGTTTCGGGtt > 2:811695‑M2/63‑150 (MQ=255) ccagcagccgcgccctctttatatttccagtgcgcagcaacacccaactctgcatctGTTTGGTGCGGATTTGGATCTCAACGGTTTTTCCACCCGGCCCCAGAACCACGGTATGAATAGACTGATAACCGTTTGGTTTCGGGTTAGCGAc < 2:489154‑M2/94‑1 (MQ=255) gccgcgccctctttatatttccagtgcgcagcaacacccaactctgcatctGTTTGGTGCGGATTTGGATCTCAACGGTTTTTCCACCCGGCCCCAGAACCACGGTATGAATAGACTGATAACCGTTTGGTTTCGGGTTAGCGACGTAATc < 1:610465‑M2/100‑1 (MQ=255) gccgcgccctctttatatttccagtgcgcagcaacacccaactctgcatctGTTTGGTGCGGATTTGGATCTCAACGGTTTTTCCACCCGGCCCCAGAACCACGGTATGAATAGACTGATAACCGTTTGGTTTCGGGTTAGCGACGTAATc < 2:296533‑M2/100‑1 (MQ=255) gccctctttatatttccagtgcgcagcaacacccaactctgcatctGTTTGGTGCGGATTTGGATCTCAACGGTTTTTCCACCCGGCCCCAGAACCACGGTATGAATAGACTGATAACCGTTTGGTTTCGGGTTAGCGACGTAATCGTCa > 2:53039‑M2/47‑150 (MQ=255) ctctttatatttccagtgcgcagcaacacccaactctgcatctGTTTGGTGCGGATTTGGATCTCAACGGTTTTTCCACCCGGCCCCAGAACCACGGTATGAATAGACTGATAACCGTTTGGTTTCGGGTTAGCGACGTAATCGTCAAACt > 1:400719‑M2/44‑151 (MQ=255) tttatatttccagtgcgcagcaacacccaactctgcatctGTTTGGTGCGGATTTGGATCTCAACGGTTTTTCCACCCGGCCCCAGAACCACGGTATGAATAGACTGATAACCGTTTGGTTTCGGGTTAGCGACGTAATCGTCAAACTCAt > 2:569291‑M2/41‑151 (MQ=255) ttatatttccagtgcgcagcaacacccaactctgcatctGTTTGGTGCGGATTTGGATCTCAACGGTTTTTCCACCCGGCCCCAGAACCACGGTATGAATAGACTGATAACCGTTTGGTTTCGGGTTAGCGACGTAATCGTCAAACTCa < 2:57371‑M2/110‑1 (MQ=255) atatttccagtgcgcagcaacacccaactctgcatctGTTTGGTGCGGATTTGGATCTCAACGGTTTTTCCACCCGGCCCCAGAACCACGGTATGAATAGACTGATAACCGTTTGGTTTCGGGTTAGCGACGTAATCGTCAAACTCATcc < 1:31458‑M2/113‑1 (MQ=255) atatttccagtgcgcagcaacacccaactctgcatctGTTTGGTGCGGATTTGGATCTCAACGGTTTTTCCACCCGGCCCCAGAACCACGGTATGAATAGACTGATAACCGTTTGGTTTCGGGTTAGCGACGTAATCGTCAAACGCATcc < 1:435029‑M2/113‑1 (MQ=255) ttccagtgcgcagcaacacccaactctgcatctGTTTGGTGCGGATTTGGATCTCAACGGTTTTTCCACCCGGCCCCAGAACCACGGTATGAATAGACTGATAACCGTTTGGTTTCGGGTTAGCGACGTAATCGTCAAACTCATCCGGCa < 1:88120‑M2/117‑1 (MQ=255) cagtgcgcagcaacacccaactctgcatctGTTTGGTGCGGATTTGGATCTCAACGGTTTTTCCACCCGGCCCCAGAACCACGGTATGAATAGACTGATAACCGTTTGGTTTCGGGTTAGCGACGTAATCGTCAAACTCATCCGGCAGGTg > 1:521526‑M2/31‑151 (MQ=255) cagtgcgcagcaacacccaactctgcatctGTTTGGTGCGGATTTGGATCTCAACGGTTTTTCCACCCGGCCCCAGAACCACGGTATGAATAGACTGATAACCGTTTGGTTTCGGGTTAGCGACGTAATCGTCAAACTCATCCGGCAGGTg < 2:656444‑M2/121‑1 (MQ=255) tgcgcagcaacacccaactctgcatctGTTTGGTGCGGATTTGGATCTCAACGGTTTTTCCACCCGGCCCCAGAACCACGGTATGAATAGACTGATAACCGTTTGGTTTCGGGTTAGCGACGTAATCGTCAAACTCATCCGGCAGGTGGCg > 2:345158‑M2/28‑151 (MQ=255) cgcagcaacacccaactctgcatctGTTTGGTGCGGATTTGGATCTCAACGGTTTTTCCACCCGGCCCCAGAACCACGGTATGAATAGACTGATAACCGTTTGGTTTCGGGTTAGCGACGTAATCGTCAAACTCATCCAGCAGGTGGCGAt > 1:389812‑M2/26‑151 (MQ=255) cacccaactctgcatctGTTTGGTGCGGATTTGGATCTCAACGGTTTTTCCACCCGGCCCCAGAACCACGGTATGAATAGACTGATAACCGTTTGGTTTCGGGTTAGCGACGTAATCGTCAAACTCATCCGGCAGGTGGCGATagtgagtg > 2:459825‑M2/18‑151 (MQ=255) cacccaactctgcatctGTTTGGTGCGGATTTGGATCTCAACGGTTTTTCCACCCGGCCCCAGAACCACGGTATGAATAGACTGATAACCGTTTGGTTTCGGGTTAGCGACGTAATCGTCAAACTCATCCGGCAGGTGGCGATagtgagtg > 2:342660‑M2/18‑151 (MQ=255) actctgcatctGTTTGGGGCGGATTTGGAGCTCAACGGTTTTTCCACCCGGCCCCAGAACCACGGTATGAATAGACTGATAACCGTTTGGTTTCGGGTTAGCGACGTAATCGTCAAACTCATCCGGCAGGTGGCGATAGTGAGTGTGCACt > 1:376620‑M2/12‑151 (MQ=255) tccgTTTGGTGCGGATTTGGATCTCAACGGTTTTTCCACCCGGCCCCAGAACCACGGTATGAATAGACTGATAACCGTTTGGTTTCGGGTTAGCGACGTAATCGTCAAACTCATCCGGCAGGTGGCGATAGTGAGTGTGCACTATcccc > 1:251719/4‑149 (MQ=255) | GGAATCAGCCATCTCTTCCTGCCACGCAATCAGTTTACGCAGCCAGGCAATCCGGTCTTCATGTCCCGAACGTGCGCCGCCAGCAGCCGCGCCCTCTTTATATTTCCAGTGCGCAGCAACACCCAACTCTGCATCTTCATGCATCTGTTTGGTGCGGATTTGGATCTCAACGGTTTTTCCACCCGGCCCCAGAACCACGGTATGAATAGACTGATAACCGTTTGGTTTCGGGTTAGCGACGTAATCGTCAAACTCATCCGGCAGGTGGCGATAGTGAGTGTGCACTATCCCC > NC_000913/2912482‑2912773 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |