Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 3,668,878 IS2 (+) +5 bp coding (307‑311/1398 nt) yhjA ← putative cytochrome C peroxidase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2996361 =NA (NA)45 (0.820) 37/294 0.9 100% noncoding (1331/1331 nt) IS2 repeat region
?NC_000913 3668878 = 0 (0.000)coding (311/1398 nt) yhjA putative cytochrome C peroxidase
* ? NC_000913 3186096 =NA (NA)51 (0.920) 45/298 0.4 100% noncoding (1/1331 nt) IS2 repeat region
?NC_000913 = 3668882 0 (0.000)coding (307/1398 nt) yhjA putative cytochrome C peroxidase

Only 100 of 101 total aligned reads displayed.

TGTTTTGCAATCCAGGCCAGTATTTCCGCCCGCTCTTCATCACTCACCTTACCCGCCCAGTGTAGCGCGGTATAACGCGTTGGTGGCATAGTTTCATACTGCATCACCCATTCAATCTTATTCAAATCGCTTTGCGAAACGGGTTTATCAGCCAGCAGTGCCGCACGCACGGCCTCAAGGTTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGTGTGGCAATAGTCGCATCCTTTTTCGCGG  >  NC_000913/3668728‑3669027
                                                                                                                                                      |                                                                                                                                                     
agcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccag                                                                                                                                                       <  2:65317‑M2/1‑1 (MQ=255)
 gcaaggaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccagc                                                                                                                                                      >  1:304780‑M2/150‑151 (MQ=255)
 gcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccagc                                                                                                                                                      >  1:304772‑M2/150‑151 (MQ=255)
 gTTTTGCAATCCAGGCCAGTATTTCCGCCCGCTCTTCATCACTCACCTTACCCGCCCAGTGTAGCGCGGTATAACGCGTTGGTGGCATAGTTTCATACTGCATCACCCATTCAATCTTATTCAAATCGCTTTGCGAAACGGGTTTATcagc                                                                                                                                                      <  1:331096/151‑1 (MQ=255)
  caaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtcttgaaatataggggcatatccagc                                                                                                                                                      <  1:60765‑M2/2‑1 (MQ=255)
   tttGCAATCCAGGCCAGTATTTCCGCCCGCTCTTCATCACTCACCTTCCCCGCCCAGTGTAGCGCGGTATAACGCGTTGGTGGCATAGTTTCATACTGCATCACCCATTCAATCTTATTCAAATCGCTTTGCGAAACGGGTTTagcagc                                                                                                                                                      <  1:339232/149‑1 (MQ=255)
   aaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccagcc                                                                                                                                                     >  2:709471‑M2/148‑150 (MQ=255)
      gCAATCCAGGCCAGTATTTCCGCCCGCTCTTCATCACTCACCTTACCCGCCCAGTGTAGCGCGGTATAACGCGTTGGTGGCATAGTTTCATACTGCATCACCCATTCAATCTTATTCAAATCGCTTTGCGAAACGGGTTTATCAGCCAGt                                                                                                                                                  <  1:829939‑M2/150‑2 (MQ=255)
        accttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCCAGCAGt                                                                                                                                               >  2:61434‑M2/143‑151 (MQ=255)
        aaTCCAGGCCAGTATTTCCGCCCGCTCTTCATCACTCACCTTACCCGCCCAGTGTAGCGCGGTATAACGCGTTGGTGGCATAGTTTCATACTGCATCACCCATTCAATCTTATTCAAATCGCTTTGCGAAACGGGTTTATCAGCCAGt                                                                                                                                                  <  2:483250‑M2/148‑2 (MQ=255)
        aaTCCAGGCCAGTATTTCCGCCCGCTCTTCATCACTCACCTTACCCGCCCAGTGTAGCGCGGTATAACGCGTTGGTGGCATAGTTTCATACTGCATCACCCATTCAATCTTATTCAAATCGCTTTGCGAAACGGGTTTATCAGCCAGt                                                                                                                                                  <  2:701187‑M2/148‑2 (MQ=255)
          cttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCCAGCAGTGc                                                                                                                                             >  2:296635‑M2/141‑151 (MQ=255)
             aGGCCAGTATTTCCGCCCGCTCTTCATCACTCACCTTACCCGCCCAGTGTAGCGCGGTATAACGCGTTGGTGGCATAGTTTCATACTGCATCACCCATTCAATCTTATTCAAATCGCTTTGCGAAACGGGTTTATCAGCCAGtagactggc                                                                                                                                          <  2:683374‑M2/151‑10 (MQ=255)
               agaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCCAGCAGTGCcgca                                                                                                                                         >  1:394672‑M2/136‑150 (MQ=255)
                ccAGTATTTCCGCCCGCTATTCATCACTCACCTTACCCGCCCAGTGTAGCGCGGTATAACGCGTTGGTGGCATAGTTTCATACTGCATCACCCATTCAATCTTATTCAAAGCGCTTTGCGAAACGGGTTTATCAGCCAGtagactggccca                                                                                                                                       >  1:521560‑M2/1‑139 (MQ=255)
                   gTATTTCCGCCCGCTCTTCATCACTCACCTTACCCGCCCAGTGTAGCGCGGTATAACGCGTTGGTGGCATAGTTTCATACTGCATCACCCATTCAATCTTATTCAAATCGCTTTGCGAAACGGGTTTATCAGCCAGtagactggccccctg                                                                                                                                    >  2:852343‑M2/1‑136 (MQ=255)
                         ccgcccgcTCTTCATCACTCACCTTACCCGCCCAGTGTAGCGCGGTATAACGCGTTGGTGGCATAGTTTCATACTGCATCACCCATTCAATCTTATTCAAATCGCTTTGCGAAACGGGTTTATCGGCCAGtagactggccccctgaatct                                                                                                                               <  1:67333‑M2/150‑21 (MQ=255)
                             attataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCCAGCAGTGCCGCACGCACGGCCTCAAgg                                                                                                                          >  1:726429‑M2/122‑151 (MQ=255)
                                 tctTCATCACTCACCTTACCCGCCCAGTGTAGCGCGGTATAACGCGTTGGTGGCATAGTTTCATACTGCATCACCCATTCAATCTTATTCAAATCGCTTTGCGAAACGGGTTTATCAGCCAGtagactggccccctgaatctccagacaac                                                                                                                      <  2:779952‑M2/151‑30 (MQ=255)
                                  ctTCATCACTCACCTTACCCGCCCAGTGTAGCGCGGTATAACGCGTTGGTGGCATAGTTTCATACTGCATCACCCATTCAATCTTATTCAAATCGCTTTGCGAAACGGGTTTATCAGCCAGtagactggccccctgaatctccagacaa                                                                                                                       >  1:869496‑M2/1‑121 (MQ=255)
                                  aacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCCAGCAGTGCCGCACGCACGGCCTCAAGGTTaaa                                                                                                                     <  2:757514‑M2/35‑1 (MQ=255)
                                   acgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCCAGCAGTGCCGCACGCACGGCCTCAAGGTTaaaa                                                                                                                    <  2:473630‑M2/36‑1 (MQ=255)
                                    tcatcaCTCACCTTACCCGCCCAGTGTAGCGCGGTATAACGCGTTGGTGGCATAGTTTCATACTGCATCACCCATTCAATCTTATTCAAATCGCTTTGCGAAACGGGTTTATCAGCCAGtagactggccccctgaatctccagacaacca                                                                                                                    <  2:821545‑M2/150‑32 (MQ=255)
                                    tcatcaCTCACCTTACCCGCCCAGTGTAGCGCGGTATAACGCGTTGGTGGCATAGTTTCATACTGCATCACCCATTCAATCTTATTCAAATCGCTTTGCGAAACGGGTTTATCAGCCAGtagactggccccctgaatctccagacaac                                                                                                                      >  1:694009‑M2/1‑119 (MQ=255)
                                      atcaCTCACCTTACCCGCCCAGTGTAGCGCGGTATAACGCGTTGGTGGCATAGTTTCATACTGCATCACCCATTCAATCTTATTCAAATCGCTTTGCGAAACGGGTTTATCAGCCAGtagactggccccctgaatctccagacaactaata                                                                                                                 >  1:779856‑M2/1‑117 (MQ=255)
                                        cactcacCTTACCCGCCCAGTGTAGCGCGGTATAACGCGTTGGTGGCATAGTTTCATACTGCATCACCCATTCAATCTTATTCAAATCGCTTTGCGAAACGGGTTTATCAGCCAGtagactggccccctgaatctccagacaaccaatat                                                                                                                >  1:758086‑M2/1‑115 (MQ=255)
                                        cactcacCTTACCCGCCCAGTGTAGCGCGGTATAACGCGTTGGTGGCATAGTTTCATACTGCATCACCCATTCAATCTTATTCAAATCGCTTTGCGAAACGGGTTTATCAGCCAGtagactggccccctgaatctccagacaaccaagatc                                                                                                               >  1:155569‑M2/1‑115 (MQ=255)
                                            cacCTTACCCGCCCAGTGTAGCGCGGTATAACGCGTTGGTGGCATAGTTTCATACTGCATCACCCATTCAATCTTATTCAAATCGCTTTGCGAAACGGGTTTATCAGCCAGtagactggccccctgaatctccagacaaccaatatcactt                                                                                                           >  2:74685‑M2/1‑111 (MQ=255)
                                            cacCTTACCCGCCCAGTGTAGCGCGGTATAACGCGTTGGTGGCATAGTTTCATACTGCATCACCCATTCAATCTTATTCAAATCGCTTTGCGAAACGCGTTTATCAGCCAGtagactggccccctgaatctccagacacccaatatcac                                                                                                             >  1:181163‑M2/1‑111 (MQ=255)
                                             acCTTACCCGCCCAGTGTAGCGCGGTATAACGCGTTGGTGGCATAGTTTCATACTGCATCACCCATTCAATCTTATTCAAATCGCTTTGCGAAACGGGTTTATCAGCCAGtagactggccccctgaatctccagacaaccaatatcactta                                                                                                          >  2:608564‑M2/1‑110 (MQ=255)
                                                 tACCCGCCCAGTGTAGCGCGGTATAACGCGTTGGTGGCATAGTTTCATACTGCATCACCCATTCAATCTTATTCAAATCGCTTTGCGAAACGGGTTTATCAGCCAGtagactggccccctgaatctccagacaaccaatatcacttaaa                                                                                                        >  1:784692‑M2/1‑106 (MQ=255)
                                                  aCCCGCCCAGTGTAGCGCGGTATAACGCGTTGGTGGCATAGTTTCATACTGCATCACCCATTCAATCTTATTCAAATCGCTTTGCGAAACGGGTTTATCAGCCAGtagactggccccctgaatctccagacaaccaatatcacttaaata                                                                                                      >  1:800667‑M2/1‑105 (MQ=255)
                                                  aCCCGCCCAGTGTAGCGCGGTATAACGCGTTGGTGGCATAGTTTCATACTGCATCACCCATTCAATCTTATTCAAATCGCTTTGCGAAACGGGTTTATCAGCCAGtagactggccccctgaatctccagacaaccaatatcacttaaa                                                                                                        >  1:666192‑M2/1‑105 (MQ=255)
                                                   cccGCCCAGTGTAGCGCGGTATAACGCGTTGGTGGCATAGTTTCATACTGCATCACCCATTCAATCTTATTCAAATCGCTTTGCGAAACGGGTTTATCAGCCAGtagactggccccctgaatctccagacaaccaatatcacttaaataag                                                                                                    >  2:806124‑M2/1‑104 (MQ=255)
                                                    ccGCCCAGTGTAGCGCGGTATAACGCGTTGGTGGCATAGTTTCATACTGCATCACCCATTCAATCTTATTCAAATCGCTTTGCGAAACGGGTTTATCAGCCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagt                                                                                                   <  2:53383‑M2/151‑49 (MQ=255)
                                                    agtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCCAGCAGTGCCGCACGCACGGCCTCAAGGTTAAAAGATTTATATCCAAGCtt                                                                                                   <  1:753012‑M2/53‑1 (MQ=255)
                                                       gcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCCAGCAGTGCCGCACGCACGGCCTCAAGGTTAAAAGATTTATATCCAAGCTTAAt                                                                                                <  2:845020‑M2/56‑1 (MQ=255)
                                                        ccAGTGTAGCGCGGTATAACGCGTTGGTGGCATAGTTTCATACTGCATCACCCATTCAATCTTATTCAAATCGCTTTGCGAAACGGGTTTATCAGCCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgat                                                                                                <  2:217521‑M2/150‑52 (MQ=255)
                                                            tgtAGCGCGGTATAACGCGTTGGTGGCATAGTTTCATACTGCATCACCCATTCAATCTTATTCAAATCGCTTTGCGAAACGGGTTTATCAGCCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtct                                                                                           <  2:697197‑M2/151‑57 (MQ=255)
                                                            gggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaTCCAGCAGTGCCGCACGCACGGCCTCAAGGTTAAAAGATTTATATCCAAGCTTAATGTc                                                                                             <  1:594496‑M2/59‑1 (MQ=255)
                                                             gtAGCGCGGTATAACGCGTTGGTGGCATAGTTTCATACTGCATCACCCATTCAATCTTATTCAAATCGCTTTGCGAAACGGGTTTATCAGCCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtct                                                                                           >  1:79940‑M2/1‑94 (MQ=255)
                                                             gtAGCGCGGTATAACGCGTTGGTGGCATAGTTTCATACTGCATCACCCATTCAATCTTATTCAAATCGCTTTGCGAAACGGGTTTATCAGCCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtct                                                                                           >  1:737830‑M2/1‑94 (MQ=255)
                                                                gcgcGGTATAACGCGTTGGTGGCATAGTTTCATACTGCATCACCCATTCAATCTTATTCAAATCGCTTTGCGAAACGGGTTTATCAGCCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgaaagtcttaat                                                                                       >  2:444610‑M2/1‑91 (MQ=255)
                                                                  tcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCCAGCAGTGCCGCACGCACGGCCTCAAGGTTAAAAGATTTATATCCAAGCTTAATGTCGTAATcc                                                                                      <  2:807856‑M2/66‑1 (MQ=255)
                                                                   cgGTATAACGCGTTGGTGGCATAGTTTCATACTGCATCACCCATTCAATCTTATTCAAATCGCTTTGCGAAACGGGTTTATCAGCCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatact                                                                                    <  1:560142‑M2/151‑64 (MQ=255)
                                                                       cgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCCAGCAGTGCCGCACGCACGGCCTCAAGGTTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCaa                                                                                 <  1:644513‑M2/71‑1 (MQ=255)
                                                                         ccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCCAGCAGTGCCGCACGCACGGCCTCAAGGTTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTg                                                                              >  2:655669‑M2/78‑151 (MQ=255)
                                                                          cacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCCAGCAGTGCCGCACGCACGGCCTCAAGGTTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACt                                                                               <  1:624843‑M2/73‑1 (MQ=255)
                                                                          cacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCCAGCAGTGCCGCACGCACGGCCTCAAGGTTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGt                                                                             <  1:542910‑M2/75‑1 (MQ=255)
                                                                           cgcgTTGGTGGCATTGTTTCATACTACATCACCCATTCAATCGTATTCAAATCGCTTTGCGAAACGGGTTTATCATCCAGtagactggcccccggaatctccagacaaccaagaacatttaaataagtgatagacttaatactagttgtta                                                                            >  1:281215‑M2/1‑80 (MQ=255)
                                                                            cgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCCAGCAGTGCCGCACGCACGGCCTCAAGGTTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGttt                                                                           <  1:418451‑M2/77‑1 (MQ=255)
                                                                             cgTTGGTGGCATAGTTTCATACTGCATCACCCATTCAATCTTATTCAAATCGCTTTGCGAAACGGGTTTATCAGCCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttaga                                                                          >  1:385717‑M2/1‑78 (MQ=255)
                                                                             cgTTGGTGGCATAGTTTCATACTGCATCACCCATTCAATCTTATTCAAATCGCTTTGCGAAACGGGTTTATCAGCCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttttt                                                                             <  1:533443‑M2/148‑71 (MQ=255)
                                                                                  gtggCATAGTTTCATACTGCATCACCCATTCAATCTTATTCAAATCGCTTTGCGAAACGGGTTTATCAGCCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagt                                                                     <  1:284072‑M2/151‑79 (MQ=255)
                                                                                  gtggCATAGTTTCATACTGCATCACCCATTCAATCTTATTCAAATCGCTTTGCGAAACGGGTTTATCAGCCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactag                                                                      <  1:248647‑M2/150‑78 (MQ=255)
                                                                                       gcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCCAGCAGTGCCGCACGCACGGCCTCAAGGTTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCa                                                                    <  1:300932‑M2/84‑1 (MQ=255)
                                                                                       gcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCCAGCAGTGCCGCACGCACGGCCTCAAGGTTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAg                                                                   <  2:158145‑M2/85‑1 (MQ=255)
                                                                                       aTAGTTTCATACTGCATCACCCATTCAATCTTATTCAAATCGCTTTGCGAAACGGGTTTATCAGCCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattg                                                                <  1:74849‑M2/151‑84 (MQ=255)
                                                                                        cggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCCAGCAGTGCCGCACGCACGGCCTCAAGGTTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAat                                                               <  1:400846‑M2/89‑1 (MQ=255)
                                                                                         ggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCCAGCAGTGCCGCACGCACGGCCTCAAGGTTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAata                                                              <  1:726455‑M2/90‑1 (MQ=255)
                                                                                         aGTTTCATACTGCATCACCCATTCAATCTTATTCAAATCGCTTTGCGAAACGGGTTTATCAGCCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattgg                                                               <  1:580634‑M2/150‑85 (MQ=255)
                                                                                          gcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCCAGCAGTGCCGCACGCACGGCCTCAAGGTTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAatat                                                             <  1:733777‑M2/91‑1 (MQ=255)
                                                                                           tttCATACTGCATCACCCATTCAATCTTATTCAAATCGCTTTGCGAAACGGGTTTATCAGCCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattg                                                                <  1:479816‑M2/147‑84 (MQ=255)
                                                                                                 aCTGCATCACCCATTCAATCTTATTCAAATCGCTTTGCGAAACGGGTTTATCAGCCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagat                                                      >  2:390525‑M2/1‑58 (MQ=255)
                                                                                                     gtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCCAGCAGTGCCGCACGCACGGCCTCAAGGTTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGc                                                   <  2:301257‑M2/101‑1 (MQ=255)
                                                                                                      taatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCCAGCAGTGCCGCACGCACGGCCTCAAGGTTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCgg                                                 >  2:297263‑M2/49‑151 (MQ=255)
                                                                                                         aCCCATTCAATCTTATTCAAATCGCTTTGCGAAACGGGTTTATCAGCCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatg                                              <  1:69290‑M2/151‑102 (MQ=255)
                                                                                                          gggttaagtgataacagatgtctggaaatataggggcaaatccaGCCAGCAGTGCCGCACGCACGGCCTCAAGGTTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTaa                                             <  1:244654‑M2/107‑1 (MQ=255)
                                                                                                            gttaagtgataacagatgtctggaaatataggggcaaatccaGCCAGCAGTGCCGCACGCACGGCCTCAAGGTTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAAtt                                           <  2:255499‑M2/109‑1 (MQ=255)
                                                                                                            gttaagtgataacagatgtctggaaatataggggcaaatccaGCCAGCAGTGCCGCACGCACGGCCTCAAGGTTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAAtt                                           >  2:52085‑M2/43‑151 (MQ=255)
                                                                                                              taagtgataacagatgtctggaaatataggggcaaatccaGCCAGCAGTGCCGCACGCACGGCCTCAAGGTTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCt                                         >  2:135157‑M2/41‑151 (MQ=255)
                                                                                                               aagtgataacagatgtctggaaatataggggcaaatccaGCCAGCAGTGCCGCACGCACGGCCTCAAGGTTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTg                                        >  1:769719‑M2/40‑151 (MQ=255)
                                                                                                                 aaTCTTATTCAAATCGCTTTGCGAAACGGGTTTATCAGCCAGtagactggcaccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactaggttttagactagtcattggagaacagatgattgatgtcttaggg                                      >  1:225016‑M2/1‑42 (MQ=255)
                                                                                                                 aaTCTTATCCAAATCGCTTTGCGAAACGGGTTTATCAGCCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttaggg                                      <  1:10997‑M2/151‑110 (MQ=255)
                                                                                                                   tCTTATTCAAATCGCTTTGCGAAACGGGTTTATCAGCCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggcc                                    <  2:428459‑M2/151‑112 (MQ=255)
                                                                                                                   gataacagatgtctggaaatataggggcaaatccaGCCAGCAGTGCCGCACGCACGGCCTCAAGGTTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCg                                     <  2:648135‑M2/115‑1 (MQ=255)
                                                                                                                    cTTATTCAAATCGCTTTGCGAAACGGGTTTATCAGCCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccg                                   <  2:732875‑M2/151‑113 (MQ=255)
                                                                                                                     taacagatgtctggaaatataggggcaaatccaGCCAGCAGTGCCGCACGCACGGCCTCAAGGTTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGa                                    >  1:299013‑M2/34‑149 (MQ=255)
                                                                                                                      aacagatgtctggaaatataggggcaaatccaGCCAGCAGTGCCGCACGCACGGCCTCAAGGTTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAgg                                 >  2:403915‑M2/33‑151 (MQ=255)
                                                                                                                      aacagatgtctggaaatataggggcaaatccaGCCAGCAGTGCCGCACGCACGGCCTCAAGGTTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAgg                                 >  1:107225‑M2/33‑151 (MQ=255)
                                                                                                                       acagatgtctggaaatataggggcaaatccaGCCAGCAGTGCCGCACGCACGGCCTCAAGGTTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGc                                >  2:556738‑M2/32‑151 (MQ=255)
                                                                                                                          gatgtctggaaatataggggcaaatccaGCCAGCAGTGCCGCACGCACGGCCTCAAGGTTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCgtg                             >  1:616515‑M2/29‑151 (MQ=255)
                                                                                                                          gatgtctggaaatataggggcaaatccaGCCAGCAGTGCCGCACGCACGGCCTCAAGGTTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCg                               >  1:211717‑M2/29‑149 (MQ=255)
                                                                                                                            aaTCGCTTTGCGAAACGGGTTTATCAGCCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacg                           >  1:713663‑M2/1‑31 (MQ=255)
                                                                                                                            aaTCACTTTGCGAAACGGGTTTATCAGCCAGtaggctggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttgttagactagtcattggagaacagatgattgatgtcttagggccggagaagcg                           >  1:240432‑M2/1‑31 (MQ=255)
                                                                                                                                gCTTTGCGAAACGGGTTTATCAGCCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcaga                       >  2:599886‑M2/1‑27 (MQ=255)
                                                                                                                                  tttGCGAAACGGGTTTATCAGCCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacg                     <  2:420496‑M2/151‑127 (MQ=255)
                                                                                                                                   aaatataggggcaaatccaGCCAGCAGTGCCGCACGCACGGCCTCAAGGTTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGTGTgg                          >  1:89626‑M2/20‑145 (MQ=255)
                                                                                                                                     gCGAAACGGGTTTATCAGCCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggc                   >  2:735513‑M2/1‑22 (MQ=255)
                                                                                                                                      cGAAACGGGTTTATCAGCCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattcgagaacagatgattgatgtcttagggccggagaaacgcagacggcgt                 <  2:714815‑M2/151‑131 (MQ=255)
                                                                                                                                       ttaggggcaaatccaGCCAGCAGTGACGCACGCACGGCCTCAAGGTTAAAAGATTTATATCCGAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTATGCCGAAGGcgggtggtcata                     >  1:684375‑M2/16‑141 (MQ=255)
                                                                                                                                       gAAACGGGTTTATCAGCCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgt                 <  1:253700‑M2/150‑131 (MQ=255)
                                                                                                                                        aaaCGGGTTTATCAGCCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtac               <  1:640087‑M2/151‑133 (MQ=255)
                                                                                                                                            ggcaaatccaGCCAGCAGTGCCGCACGCACGGCCTCAAGGTTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGTGTGGCAATAGTCGCATCCt           >  2:814413‑M2/11‑151 (MQ=255)
                                                                                                                                              caaatccaGCCAGCAGTGCCGCACGCACGGCCTCAAGGTTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGTGTGGCAATAGTCGCATCCttt         <  2:863458‑M2/143‑1 (MQ=255)
                                                                                                                                                 atccaGCCAGCCGTGCCTCACGCACGGCTTCAAGGTTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATATGCGGGTAATTCTTCCGAAGGCGTGTGGCAATAGTCGCATCCTTTTTc      <  1:509528‑M2/146‑1 (MQ=255)
                                                                                                                                                  aTCAGCCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacagga      <  1:394284‑M2/150‑142 (MQ=255)
                                                                                                                                                   ccaGCCAGCAGTGCCGCACGCACGGCCTCAAGGTTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGGAATTCTGCCGAAGGCGTGTGGCAATAGTCGCATCCTTTTTcg     >  2:453444‑M2/4‑150 (MQ=255)
                                                                                                                                                    caGCCAGCAGTGCCGCACGCACGGCCTCAAGGTTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGTGTGGCAATAGTCGCATCCTTTTTcgcg   >  1:845864‑M2/3‑151 (MQ=255)
                                                                                                                                                     aGCCAGCAGTGCCGCACGCACGGCCTCAAGGTTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGTGTGGCAATAGTCGCATCCTTTTTCGCgg  >  1:50585‑M2/2‑151 (MQ=255)
                                                                                                                                                      |                                                                                                                                                     
TGTTTTGCAATCCAGGCCAGTATTTCCGCCCGCTCTTCATCACTCACCTTACCCGCCCAGTGTAGCGCGGTATAACGCGTTGGTGGCATAGTTTCATACTGCATCACCCATTCAATCTTATTCAAATCGCTTTGCGAAACGGGTTTATCAGCCAGCAGTGCCGCACGCACGGCCTCAAGGTTAAAAGATTTATATCCAAGCTTAATGTCGTAATCCATCAACTGTTTCGCGCCAGGAATATAATAATAGGCGGGTAATTCTGCCGAAGGCGTGTGGCAATAGTCGCATCCTTTTTCGCGG  >  NC_000913/3668728‑3669027

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.