Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 260,217 Δ13,738 bp IS5‑mediated proB[ykfC] 21 genes

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 260217 275071–273955 13739–14855 89 [0] [31] 32 proB–[insH1] 22 genes
proB, proA, thrW, ykfN, ykfI, yafW, ykfH, ykfG, yafX, ykfF, ykfB, yafY, ykfL, ykfK, yafZ, ykfA, perR, insN, insI1, insN, ykfC, [insH1]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2602160 (0.000)89 (1.400) 59/298 0.1 100% intergenic (‑116/‑172) phoE/proB outer membrane phosphoporin protein E/gamma‑glutamate kinase
?NC_000913 273955 = NA (NA)noncoding (1195/1195 nt) IS5 repeat region

CATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGGGAGAGTCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAAATGTGGTAATTTATTAAATCTGTAATAAAAGCGTAAACAACTGCCGCTAGGCTTGCTGATCCCGCGCAACAAAACGCCATGCTTTGCTCGCAGATGGTTGGCAACCGACGACAGTCCTGCTAAAACGTTCGTTTGATATCATTTTTCC  >  NC_000913/260068‑260365
                                                                                                                                                    |                                                                                                                                                     
cATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGGGAGAGTCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAgg                                                                                                                                                     <  1:137892‑M1/151‑3 (MQ=255)
   caccacTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGGGAGAGTCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAggaa                                                                                                                                                   <  1:557618‑M1/150‑5 (MQ=255)
     ccacTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGGGAGAGTCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAggaagg                                                                                                                                                 <  1:342158‑M1/150‑7 (MQ=255)
      cacTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGGGAGAGTCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAggaaggtg                                                                                                                                               <  1:485585‑M1/151‑9 (MQ=255)
       acTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGGGAGAGTCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAggaaggtg                                                                                                                                               <  1:101856‑M1/150‑9 (MQ=255)
          aaTGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGGGAGAGTCCCGTTGAAAACAGGAAAGTTTTTAACCTAAGATTGTTAAAGATCTATTACAGATTAATAATATTCTTAAggaagctgcg                                                                                                                                             <  2:70064‑M1/149‑11 (MQ=255)
           aTGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGGGAGAGTCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAggaaggtgcgaat                                                                                                                                          <  1:317980‑M1/151‑14 (MQ=255)
             gCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGGGAGAGTCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAggaaggtgcgaata                                                                                                                                         <  2:480499‑M1/150‑15 (MQ=255)
              ccAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGGGAGAGTCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAggaaggtgcgaataag                                                                                                                                       <  1:758482‑M1/151‑17 (MQ=255)
               cAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGGGAGAGTCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAggaaggtgcgaataagc                                                                                                                                      <  2:28891‑M1/151‑18 (MQ=255)
                   gTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGGGAGAGTCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAggaaggtgcgaataagcgggg                                                                                                                                  >  1:762911‑M1/1‑130 (MQ=255)
                      ctctTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGGGAGAGTCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAggaaggtgcgaataagcggggaa                                                                                                                                >  1:125341‑M1/1‑127 (MQ=255)
                        ctTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGGGAGAGTCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAggaaggtgcgaataagcggggaaatt                                                                                                                             >  1:930313‑M1/1‑125 (MQ=255)
                        ctTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGGGAGAGTCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAggaaggtgcgaataagcggggaaa                                                                                                                               <  1:283290‑M1/149‑25 (MQ=255)
                            ttcattttcattCCTGATTTTAATTAACGCGCGAATATTCAGCGGGAGAGTCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAggaaggtgcgaataagcggggaaattcttc                                                                                                                         >  2:317519‑M1/1‑121 (MQ=255)
                              cattttcattCCTGATTTTAATTAACGCGCGAATATTCAGCGGGAGAGTCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAggaaggtgcgaataagcggggaaattcttctc                                                                                                                       >  1:624095‑M1/1‑119 (MQ=255)
                              cattttcattCCTGATTTTAATTAACGCGCGAATATTCAGCGGGAGAGTCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAggaaggtgcgaataagcggggaaattcttctc                                                                                                                       >  1:995527‑M1/1‑119 (MQ=255)
                                    cattCCTGCTTTTAATTAACGCGCGAATATTCAGCGCGAGAGTCCCGTTGAAAACAGGACAGTTTCTAACCTGCGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAggcaggtgcgaataagcggggaaattcttctcggct                                                                                                                   >  2:321957‑M1/1‑113 (MQ=255)
                                    cattCCTGATTTTAATTAACGCGCGAATATTCAGCGGGAGAGTCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAggaaggtgcgaataagcggggaaattcttctcggcta                                                                                                                  <  2:145112‑M1/150‑38 (MQ=255)
                                      ttCCTGATTTTATTAACGCGCGAATATTCAGCGGGAGAGTCACGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAggaaggtgcgaataagcggggaaattcttctcggctgactc                                                                                                              >  1:265589‑M1/1‑110 (MQ=255)
                                        ccTGATTTTAATTAACGCGCGAATATTCAGCGGGAGAGTCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAggaaggtgcgaataagcggggaaattcttctcggctgactc                                                                                                              >  1:86233‑M1/1‑109 (MQ=255)
                                           gATTTTAATTAACGCGCGAATATTCAGCGGGAGAGTCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtc                                                                                                          <  2:247858‑M1/151‑46 (MQ=255)
                                              tttAATTAACGCGCGAATATTCAGCGGGAGAGTCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatt                                                                                                       >  1:417804‑M1/1‑103 (MQ=255)
                                                taattaaCGCGCGAATATTCAGCGGGAGAGTCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttc                                                                                                     >  2:200348‑M1/1‑101 (MQ=255)
                                                 aattaaCGCGCGAATATTCAGCGGGAGAGTCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttc                                                                                                     >  1:133962‑M1/1‑100 (MQ=255)
                                                     aaCGCGCGAATATTCAGCGGGAGAGTCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGGTAAAGATATATTACAGATTAATAATATTCTTAAggaacgtgcgaataagcgtggaaattcttctcggctgactcagtcatttcattt                                                                                                 <  2:212957‑M1/150‑55 (MQ=255)
                                                      aCGCGCGAATATTCAGCGGGAGAGTCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttct                                                                                               >  1:584256‑M1/1‑95 (MQ=255)
                                                      aCGCGCGAATATTCAGCGGGAGAGTCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcattt                                                                                                 <  2:307268‑M1/149‑55 (MQ=255)
                                                        gcgcgAATATTCAGCGGGAGAGTCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttc                                                                                             >  2:919252‑M1/1‑93 (MQ=255)
                                                                       gggAGAGTCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatt                                                                              >  2:267230‑M1/1‑78 (MQ=255)
                                                                                  gTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgt                                                                   >  2:804747‑M1/1‑67 (MQ=255)
                                                                                   ttGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgt                                                                   >  1:900591‑M1/1‑66 (MQ=255)
                                                                                     gAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaa                                                                 <  1:694982‑M1/150‑87 (MQ=255)
                                                                                      aaaaCAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaat                                                               <  2:89977‑M1/151‑89 (MQ=255)
                                                                                      aaaaCAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatgtcttcatgtttgagccgattttttctcccgtaaat                                                               <  2:394548‑M1/151‑89 (MQ=255)
                                                                                       aaaCAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaat                                                               >  2:829724‑M1/1‑62 (MQ=255)
                                                                                        aaCAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgc                                                             >  1:127806‑M1/1‑61 (MQ=255)
                                                                                          cAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcct                                                           >  2:593151‑M1/1‑59 (MQ=255)
                                                                                             gAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttga                                                        <  1:106429‑M1/151‑96 (MQ=255)
                                                                                              aaaGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttga                                                        >  1:996081‑M1/1‑55 (MQ=255)
                                                                                                 gTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatca                                                    <  1:313692‑M1/151‑100 (MQ=255)
                                                                                                    tttAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcc                                                 >  2:822580‑M1/1‑49 (MQ=255)
                                                                                                      tAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcct                                                <  1:96823‑M1/150‑104 (MQ=255)
                                                                                                         ccTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctattt                                            <  1:559486‑M1/151‑108 (MQ=255)
                                                                                                         ccTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctattt                                            >  2:231157‑M1/1‑44 (MQ=255)
                                                                                                         ccTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctattt                                            >  1:404399‑M1/1‑44 (MQ=255)
                                                                                                            gagaTGGTTAAAGATATATTACAGATGAATAATATTCTTAAggaaggtgcgaataagcggagaaattcttctcggctgactcagtcaggtcatttcttcaggtttgagccgatttttgctcccgtaaatgccttgaatcggcctatttag                                          <  2:872175‑M1/150‑110 (MQ=255)
                                                                                                             agaTTGTTAAAGATATATTACAGATTAATAATATTCTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagac                                        <  1:655038‑M1/151‑112 (MQ=255)
                                                                                                              gaTTGTTAAAGATATATTACAGATTAATAATATTCTTAAggaaggtgcgaataagcggggaaattcttcgcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagacc                                       <  2:761390‑M1/151‑113 (MQ=255)
                                                                                                                ttGTTAAAGATATATTACAGATTAATAATATTCTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgt                                     >  1:882458‑M1/1‑37 (MQ=255)
                                                                                                                   ttAAAGATATATTACAGATTAATAATATTCTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgttt                                   >  2:526358‑M1/1‑34 (MQ=255)
                                                                                                                     aaaGATATATTACAGATTAATAATATTCTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttct                                 <  2:894688‑M1/150‑119 (MQ=255)
                                                                                                                         atatatTACAGATTAATAATATTCTTAAgggaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgcc                            >  2:468337‑M1/1‑28 (MQ=255)
                                                                                                                           atatTACAGATTAATAATATTCTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccat                          >  1:916758‑M1/1‑26 (MQ=255)
                                                                                                                            tatTACAGATTAATAATATTCTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatt                         >  1:920589‑M1/1‑25 (MQ=255)
                                                                                                                              ttACAGATTAATAATATTCTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccattt                        >  1:53471‑M1/1‑23 (MQ=255)
                                                                                                                                 cAGATTAATAATATTCTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaagg                    >  1:925428‑M1/1‑20 (MQ=255)
                                                                                                                                  aGATTAATAATATTCTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggc                   >  2:518288‑M1/1‑19 (MQ=255)
                                                                                                                                  aGATTAATAATATTCTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggc                   >  1:45605‑M1/1‑19 (MQ=255)
                                                                                                                                   tctcgtaaacacaactaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcg                  >  1:921147‑M1/16‑18 (MQ=255)
                                                                                                                                   gATTAATAATATTCTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcg                  >  1:360809‑M1/1‑18 (MQ=255)
                                                                                                                                   gATTAATAATATTCTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcg                  <  1:824903‑M1/151‑134 (MQ=255)
                                                                                                                                   gATTAATAATATTCTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcg                  <  1:467669‑M1/151‑134 (MQ=255)
                                                                                                                                   gATTAATAATATTCTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcg                  <  2:152643‑M1/151‑134 (MQ=255)
                                                                                                                                    ctcgtaaacacaactaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgt                 >  2:227708‑M1/15‑17 (MQ=255)
                                                                                                                                       gtaaacacaactaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttat              <  1:114537‑M1/140‑138 (MQ=255)
                                                                                                                                        ataataTTCTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatc             >  2:165325‑M1/1‑13 (MQ=255)
                                                                                                                                          aataTTCTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccc           >  1:335721‑M1/1‑11 (MQ=255)
                                                                                                                                          aataTTCTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatcc            <  1:813413‑M1/150‑140 (MQ=255)
                                                                                                                                          aacacaactaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccc           >  1:233829‑M1/9‑11 (MQ=255)
                                                                                                                                           acacaactaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatcccc          <  1:281287‑M1/144‑142 (MQ=255)
                                                                                                                                            tatTCTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatcccc          >  2:561050‑M1/1‑9 (MQ=255)
                                                                                                                                             atTCTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatcccc          >  1:712929‑M1/1‑8 (MQ=255)
                                                                                                                                             acaactaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccag        <  1:697314‑M1/146‑144 (MQ=255)
                                                                                                                                             acaactaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatcccc          >  2:687556‑M1/6‑8 (MQ=255)
                                                                                                                                               aactaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtt      >  1:52965‑M1/4‑6 (MQ=255)
                                                                                                                                               aactaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtt      >  1:188451‑M1/4‑6 (MQ=255)
                                                                                                                                                 ttAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttt    >  1:700594‑M1/1‑4 (MQ=255)
                                                                                                                                                  tAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttt     <  2:438536‑M1/149‑147 (MQ=255)
                                                                                                                                                  tAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcccatttagaccgtttcttcgccatttaaggcgttatccccagttttt   >  1:664699‑M1/1‑3 (MQ=255)
                                                                                                                                                   aaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttttta  <  2:764700‑M1/151‑150 (MQ=255)
                                                                                                                                                   aaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttttta  <  1:924195‑M1/151‑150 (MQ=255)
                                                                                                                                                   aaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttttta  <  2:86223‑M1/151‑150 (MQ=255)
                                                                                                                                                   aaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttttt   <  2:628087‑M1/150‑149 (MQ=255)
                                                                                                                                                   aaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttttt   >  1:232479‑M1/1‑2 (MQ=255)
                                                                                                                                                   aaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttttt   >  2:446150‑M1/1‑2 (MQ=255)
                                                                                                                                                   aaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttttt   <  2:18157‑M1/150‑149 (MQ=255)
                                                                                                                                                    aggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttttt   >  1:848245‑M1/1‑1 (MQ=255)
                                                                                                                                                    aggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttttt   >  2:909037‑M1/1‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
CATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGGGAGAGTCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAAATGTGGTAATTTATTAAATCTGTAATAAAAGCGTAAACAACTGCCGCTAGGCTTGCTGATCCCGCGCAACAAAACGCCATGCTTTGCTCGCAGATGGTTGGCAACCGACGACAGTCCTGCTAAAACGTTCGTTTGATATCATTTTTCC  >  NC_000913/260068‑260365

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.