New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3316548 =102 (1.130)108 (1.240) 88/288 0.1 52.0% coding (979/1488 nt) nusA transcription termination/antitermination L factor
?NC_000913 = 3399212 101 (1.160)coding (767/1104 nt) mreC cell wall structural complex MreBCD transmembrane component MreC

Only 100 of 220 total aligned reads displayed.

GCGTCTGGCGAAGGCAATACCTGCGGCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGCCGGCAGATGCT  >  NC_000913/3399062‑3399362
                                                                                                                                                      |                                                                                                                                                      
gcgTCTGGCGAAGGCAATACCTGCGGCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCg                                                                                                                                                        <  2:1181037/151‑1 (MQ=255)
  gTCTGGCGAAGGCAATACCTGCGGCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGga                                                                                                                                                      >  1:684909‑M2/1‑149 (MQ=255)
   tCTGGCGAAGGCAATACCTGCGGCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgac                                                                                                                                                     <  1:62281‑M2/151‑4 (MQ=255)
    cTGGCGAAGGCAATACCTGCGGCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgac                                                                                                                                                     <  2:1269513‑M2/150‑4 (MQ=255)
      ggCGAAGGCAATACCTGCGGCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgc                                                                                                                                                   >  1:1009913‑M2/1‑145 (MQ=255)
      ggCGAAGGCAATACCTGCGGCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgac                                                                                                                                                     >  1:20947‑M2/1‑145 (MQ=255)
            ggCAATACCTGCGGCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttct                                                                                                                                            >  2:907444‑M2/1‑139 (MQ=255)
              cAATACCTGCGGCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctg                                                                                                                                           <  1:326351‑M2/150‑14 (MQ=255)
                aTACCTGCGGCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgacc                                                                                                                                        >  1:176548‑M2/1‑135 (MQ=255)
                aTACCTGCGGCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATcac                                                                                                                                        <  2:975570/151‑1 (MQ=255)
                 tACCTGCGGCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATcac                                                                                                                                        >  2:1338717/1‑150 (MQ=255)
                     tGCGGCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGtat                                                                                                                                   >  2:1281500/1‑151 (MQ=255)
                       cGGCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacgg                                                                                                                                 <  2:418276‑M2/151‑24 (MQ=255)
                       cGGCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATaa                                                                                                                                 <  1:1183654/151‑1 (MQ=255)
                        ggCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGtata                                                                                                                                  >  2:518430/1‑149 (MQ=255)
                        ggCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAg                                                                                                                                <  2:235886/151‑1 (MQ=255)
                         gCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAgc                                                                                                                               <  1:348359/151‑1 (MQ=255)
                         gCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAgc                                                                                                                               <  1:879308/151‑1 (MQ=255)
                             catcTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAgcgcgc                                                                                                                           >  1:1037473/1‑151 (MQ=255)
                                  gCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTggg                                                                                                                       <  2:1001208/150‑1 (MQ=255)
                                  gCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGt                                                                                                                      <  1:912288/151‑1 (MQ=255)
                                   cATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGt                                                                                                                      >  2:1414826/1‑150 (MQ=255)
                                       aGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgcc                                                                                                                  <  1:390239‑M2/150‑39 (MQ=255)
                                          cGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggt                                                                                                              >  1:566865‑M2/1‑109 (MQ=255)
                                             tCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggtta                                                                                                            >  1:935915‑M2/1‑106 (MQ=255)
                                             tCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggtta                                                                                                            >  2:3160‑M2/1‑106 (MQ=255)
                                              cATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGCATAAGCGCGCTGGGTATCGAGTTTTa                                                                                                           >  1:161201/1‑150 (MQ=255)
                                                  aGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGaa                                                                                                      <  2:117239/151‑1 (MQ=255)
                                                  aGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGa                                                                                                       >  1:302663/1‑150 (MQ=255)
                                                     aaCACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAaga                                                                                                    <  1:137474/150‑1 (MQ=255)
                                                      acacGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAgaga                                                                                                  <  2:339262/151‑1 (MQ=255)
                                                       cacGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaac                                                                                                 >  2:200046‑M2/1‑96 (MQ=255)
                                                       cacGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaac                                                                                                 <  2:988891‑M2/151‑56 (MQ=255)
                                                        acGGTGCACCTCTGCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACa                                                                                                <  1:98434/151‑1 (MQ=255)
                                                        acGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGAc                                                                                                 >  1:528377/1‑150 (MQ=255)
                                                        acGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGAc                                                                                                 >  1:1312450/1‑150 (MQ=255)
                                                         cGATGCACCTCCTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacgg                                                                                               <  2:1166773‑M2/151‑58 (MQ=255)
                                                          gATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggc                                                                                              >  2:82835‑M2/1‑93 (MQ=255)
                                                           aTGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcg                                                                                             >  2:988537‑M2/1‑92 (MQ=255)
                                                           aTGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcg                                                                                             >  2:1317914‑M2/1‑92 (MQ=255)
                                                           aTGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAAcc                                                                                             <  2:648321/151‑1 (MQ=255)
                                                            tGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcg                                                                                             <  1:636472‑M2/150‑60 (MQ=255)
                                                               aCCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCACCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACcgcg                                                                                          >  2:22472/1‑150 (MQ=255)
                                                                  tctTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatcc                                                                                       <  2:1031713‑M2/150‑66 (MQ=255)
                                                                  tctTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCg                                                                                      >  2:1062536/1‑151 (MQ=255)
                                                                     tCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCg                                                                                      <  1:243081/148‑1 (MQ=255)
                                                                      ccGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatccatggt                                                                                  <  2:817649‑M2/151‑71 (MQ=255)
                                                                      ccGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGAt                                                                                   >  1:757519/1‑150 (MQ=255)
                                                                       cGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAg                                                                                 <  2:1396108/151‑1 (MQ=255)
                                                                         gCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatccatggtgtg                                                                               <  1:1159504‑M2/151‑74 (MQ=255)
                                                                          cGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCt                                                                              >  1:1217158/1‑151 (MQ=255)
                                                                           gTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatccatggtgtgtt                                                                             >  1:815798‑M2/1‑76 (MQ=255)
                                                                             cATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTcc                                                                           >  1:548350/1‑151 (MQ=255)
                                                                              aTCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatccatggtgtgtttat                                                                          <  1:1306690‑M2/151‑79 (MQ=255)
                                                                                     tAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAAc                                                                    <  2:1015144/150‑1 (MQ=255)
                                                                                      aGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatccatggtgtgtttatcttcatcc                                                                  <  2:1380466‑M2/151‑87 (MQ=255)
                                                                                      aGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGa                                                                  <  2:1177347/151‑1 (MQ=255)
                                                                                        cgcCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatccatggtgtgtttatcttcatccac                                                                <  2:1372877‑M2/151‑89 (MQ=255)
                                                                                           cGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatccatggtgtgtttatcttcatccaccac                                                             >  2:803470‑M2/1‑60 (MQ=255)
                                                                                             ttACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGccc                                                            >  1:1286274/1‑150 (MQ=255)
                                                                                               aCGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGccc                                                            >  2:1044642/1‑148 (MQ=255)
                                                                                               aCGATCAGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatccatggtgtgtttatcttcatccaccacgata                                                         >  1:412851‑M2/1‑56 (MQ=255)
                                                                                                  aTCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgccgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatccatggtgtgtttatcttcatccaccacgataga                                                       <  1:1350827‑M2/150‑98 (MQ=255)
                                                                                                   tCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatccatggtgtgtttatcttcatccaccacgataga                                                       <  2:495699‑M2/149‑98 (MQ=255)
                                                                                                    cTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCgg                                                     >  1:125264/1‑150 (MQ=255)
                                                                                                     tGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatccatggtgtgtttatcttcatccaccacgatagaagc                                                    <  1:1235779‑M2/150‑101 (MQ=255)
                                                                                                      gCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatccatggtgtgtttatcttcatccaccacgatata                                                       >  1:104758‑M2/1‑49 (MQ=255)
                                                                                                      gCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGaa                                                   <  2:727678/150‑1 (MQ=255)
                                                                                                        cccccACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatccatggtgtgtttatcttcatccaccacgatagaagcaacg                                                <  2:637014‑M2/151‑105 (MQ=255)
                                                                                                         ccccACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatccatggtgtgtttatcttcatccaccacgatagaagcaacgt                                               <  2:562842‑M2/151‑106 (MQ=255)
                                                                                                              cagcagcagcagATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGc                                          <  2:295621/151‑1 (MQ=255)
                                                                                                              caacagcagcagATAACGCAATCGTTTCAGCCCTGCAGTCGaacgcacgttctgaccgttacggccaatcgcctgctccaggttaccggcttcaacggcaatatccatggtgtgtttatcttcatccaccacgatagaagcaacgtctgcc                                          >  2:434369‑M2/1‑41 (MQ=255)
                                                                                                               agcagcagcagATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatccatggtgtgtttatcttcatccaccacgatagaagcaacgtctgccg                                         <  1:1081487‑M2/151‑112 (MQ=255)
                                                                                                               agcagcagcagATAACGCAAACGTTGCAGCACTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGc                                          >  2:691835/1‑150 (MQ=255)
                                                                                                                gcagcagcagATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGcac                                        <  1:518336/151‑1 (MQ=255)
                                                                                                                   gcagcagATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatccatggtgtgtttatcttcatccaccacgatagaagcaacgtctgccggtgc                                     <  2:211649‑M2/151‑116 (MQ=255)
                                                                                                                   gcagcagATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatccatggtgtgtttatcttcatccaccacgatagaagcaacgtctgccggtgc                                     >  2:162825‑M2/1‑36 (MQ=255)
                                                                                                                   gcagcagATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatccatggtgtgtttatcttcatccaccacgatagaagcaacgtctgccggtgc                                     <  2:38945‑M2/151‑116 (MQ=255)
                                                                                                                    cagcagATAACGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatccatggtgtgtttatcttcatccaccacgatagaagcaacgtctgccggtgcc                                    <  2:536573‑M2/151‑117 (MQ=255)
                                                                                                                          aTAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAaca                              <  1:951486/151‑1 (MQ=255)
                                                                                                                          aTAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAac                               >  1:1046458/1‑150 (MQ=255)
                                                                                                                            aaCGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAacaca                            <  2:1144898/151‑2 (MQ=255)
                                                                                                                             aCGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGa                           <  1:639423/151‑1 (MQ=255)
                                                                                                                              cGCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatccatggtgtgtttatcttcatccaccacgatagaagcaacgtctgccggtgccattgcgtta                           <  1:373334‑M2/150‑126 (MQ=255)
                                                                                                                               gCAAACGTTGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatccatggtgtgtttatcttcatccaccacgatagaagcaacgtctgccggtgccattgcgttaat                         >  2:1340843‑M2/1‑24 (MQ=255)
                                                                                                                               gCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAat                         >  1:803764/1‑151 (MQ=255)
                                                                                                                                  aaCGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATc                      >  2:178516/1‑151 (MQ=255)
                                                                                                                                   aCGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATcc                     <  1:461889/151‑1 (MQ=255)
                                                                                                                                      ttGCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatccatggtgtgtttatcttcatccaccacgatagaagcaacgtctgccggtgccattgcgttaatcacga                    <  2:732020‑M2/149‑133 (MQ=255)
                                                                                                                                        gCAGCCCTGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatccatggtgtgtttatcttcatccaccacgatagaagcaacgtctgccggtgccattgcgttaatcacgaact                 >  1:556619‑M2/1‑15 (MQ=255)
                                                                                                                                             ccTGCAGTCGgacgcacgttatgaccgttacggccaatcgcctgcgccagggtaccggcttcgacggcgatatccatggagtgtttatcgtcatccaccacgatagaagaaacgtctgccggtgccattgcgttaatcacgaactgcgcc            <  1:506598‑M2/150‑141 (MQ=255)
                                                                                                                                               tGCAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatccatggtgtgtttatcttcatccaccacgatagaagcaacgtctgccggtgccattgcgttaatcacgaactgcgccggg         <  2:768905‑M2/151‑144 (MQ=255)
                                                                                                                                                gCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGCCgg          <  2:1115315/149‑1 (MQ=255)
                                                                                                                                                gCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGCCGGCa        <  1:442475/151‑1 (MQ=255)
                                                                                                                                                 cAGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatccatggtgtgtttatcttcatccaccacgatagaagcaacgtctgccggtgccattgcgttaatcacgaactgcgccgggtt       >  2:620553‑M2/1‑6 (MQ=255)
                                                                                                                                                  aGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatccatggtgtgtttatcttcatccaccacgatagaagcaacgtctgccggtgccattgcgttaatcacgaactgcgccgggtt       <  1:234844‑M2/150‑146 (MQ=255)
                                                                                                                                                  aGTCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatccatggtgtgtttatcttcatccaccacgatagaagcaacgtctgccggtgccattgcgttaatcacgaactgcgccgggtt       <  1:293360‑M2/150‑146 (MQ=255)
                                                                                                                                                   gTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGCCGGCAGAt     <  1:740359/151‑1 (MQ=255)
                                                                                                                                                    tCGgacgcacgttctgaccgttacggccaatcgcctgcgccaggttaccggcttcaacggcgatatccatggtgtgtttatcttcatccaccacgatagaagcaacgtctgccggtgccattgcgttaatcacgaactgcgccgggttatc    <  1:89403‑M2/151‑149 (MQ=255)
                                                                                                                                                      ggACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGCCGGCAGATGCt  <  2:870569/151‑1 (MQ=255)
                                                                                                                                                      |                                                                                                                                                      
GCGTCTGGCGAAGGCAATACCTGCGGCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGCCGGCAGATGCT  >  NC_000913/3399062‑3399362

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.