| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 3,277,273 | (TTCAACA)2→3 | coding (272/336 nt) | prlF → | antitoxin of the SohA(PrlF)‑YhaV toxin‑antitoxin system |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3277257 | 0 (0.000) | 38 (1.160) +CATTCAA |
35/252 | 0.0 | 100% | coding (256/336 nt) | prlF | antitoxin of the SohA(PrlF)‑YhaV toxin‑antitoxin system |
| ? | NC_000913 | 3277258 = | 0 (0.000) | coding (257/336 nt) | prlF | antitoxin of the SohA(PrlF)‑YhaV toxin‑antitoxin system | |||||
CCAGGCCAGGACAGCATTCATTACGAAATTCTGCCTGGTGGGCAAGTATTTATGTGCCGACTGGGAGATGAACAGGAGGATCATACTATGAATGCATTTTTGCGTTTTCTGGATGCAGATATCCAGAACAACCCGCAAAAAACTCGTCCATTCAACATTCAACAAGGAAAGAAACTTGTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTTTTCAGGAA > NC_000913/3277110‑3277396 | aggacagcattcattatgaaattctgcctggtgggcaagtatttatgtgccgactgggagatgaacaggaggatcatactatgaatgcatttttgcgttttctggatgcagatatccagaacaacccgcaaaaaactcgtccattcaacat > 2:20929‑M2/149‑151 (MQ=255)aggacagcattcattacgaaattctgcctggtgggcaagtatttatgtgccgactgggagatgaacaggaggatcatactatgaatgcatttttgcgttttctggatgcagatatccagaacaacccgcaaaaaactcgtccattcaacat > 1:428245‑M2/149‑151 (MQ=255) gacagcattcattacgaaattctgcctggtgggcaagtatttatgtgccgactgggagatgaacaggaggatcatactatgaatgcatttttgcgttttctggatgcagatatccagaacaacccgcaaaaaactcgtccattcaacattc > 1:273899‑M2/147‑151 (MQ=255) cagcattcattacgaaattctgcctggtgggcaagtatttatgtgccgactgggagatgaacaggaggatcatactatgaatgcatttttgcgttttctggatgcagatatccagaacaacccgcaaaaaactcgtccattcaacattca > 1:417292‑M2/145‑150 (MQ=255) agcattcattacgaaattctgcctggtgggcaagtatttatgtgccgactgggagatgaacaggaggatcatactatgaatgcatttttgcgttttctggatgcagatatccagaacaacccgcaaaaaactcgtccattcaacattcaac > 1:481707‑M2/144‑151 (MQ=255) cattcattacgaaattctgcctggtgggcaagtatttatgtgccgactgggagatgaacaggaggatcatactatgaatgcatttttgcgttttctggatgcagatatccagaacaacccgcaaaaaactcgtccattcaacattcaacat > 2:136039‑M2/142‑151 (MQ=255) ttacgaaattctgcctggtgggcaagtatttatgtgccgactgggagatgaacaggaggatcatactatgaatgcatttttgcgttttctggatgcagatatccagaacaacccgcaaaaaactcgtccattcaacattcaacattcaac > 1:534111‑M2/136‑150 (MQ=255) cgaaattctgcctggtgggcaagtatttatgtgccgactgggagatgaacaggaggatcatactatgaatgcatttttgcgttttctggatgcagatatccagaacaacccgcaaaaaactcgtccattcaaCATTCAACATTCAACAAgg > 1:317643‑M2/133‑151 (MQ=255) tctgcctggtgggcaagtatttatgtgccgactgggagatgaacaggaggatcatactatgaatgcatttttgcgttttctggatgcagatatccagaacaacccgcaaaaaactcgtccattcaaCATTCAACATTCAACAAGgaaaga > 2:283052‑M2/127‑150 (MQ=255) gcctggtgggcaagtatttatgtgccgactgggagatgaacaggaggatcatactatgaatgcatttttgcgttttctggatgcagatatccagaacaacccgcaaaaaactcgtccattcaaCATTCAACATTCAACAAGgaaagaaa < 1:268695‑M2/26‑1 (MQ=255) gcctggtgggcaagtatttatgtgccgactgggagatgaacaggaggatcatactatgaatgcatttttgcgttttctggatgcagatatccagaacaacccgcaaaaaactcgtccattcaaCATTCAACATTCAACAAGGAAAGAAACt > 2:213366‑M2/124‑151 (MQ=255) ctggtgggcaagtatttatgtgccgactgggagatgaacaggaggatcatactatgaatgcatttttgcgttttctggatgcagatatccagaacaacccgcaaaaaactcgtccattcaaCATTCAACATTCAACAAGGAAAGAAACTTg > 1:345420‑M2/122‑151 (MQ=255) gggcaagtatttatgtgccgactgggagatgaacaggaggatcatactatgaatgcatttttgcgttttctggatgcagatatccagaacaacccgcaaaaaactcgtccattcaaCATTCAACATTCAACAAGGAAAGAAACTTGTCGc < 2:394331‑M2/34‑1 (MQ=255) gggcaagtatttatgtgccgactgggagatgaacaggaggatcatactatgaatgcatttttgcgttttctggatgcagatatccagaacaacccgcaaaaaactcgtccattcaaCATTCAACATTCAACAAGGAAAGAAACTTGTCGCt > 2:363905‑M2/117‑151 (MQ=255) atttatgtgccgactgggagatgaacaggaggatcatactatgaatgcatttttgcgttttctggatgcagatatccagaacaacccgcaaaaaactcgtccattcaaCATTCAACATTCAACAAGGAAAGAAACTTGTCGCTGGCATGGa < 1:497557‑M2/43‑1 (MQ=255) ttatgtgccgactgggagatgaacaggaggatcatactatgaatgcatttttgcgttttctggatgcagatatccagaacaacccgcaaaaaactcgtccattcaaCATTCAACATTCAACAAGGAAAGAAACTTGTCGCTGGCATGGAc < 1:27643‑M2/44‑1 (MQ=255) ttatgtgccgactgggagatgaacaggaggatcatactatgaatgcatttttgcgttttctggatgcagatatccagaacaacccgcaaaaaactcgtccattcaaCATTCAACATTCAACAAGGAAAGAAACTTGTCGCTGGCATGGACg > 2:82866‑M2/107‑151 (MQ=255) tatgtgccgactgggagatgaacaggaggatcatactatgaatgcatttttgcgttttctggatgcagatatccagaacaacccgcaaaaaactcgtccattcaaCATTCAACATTCAACAAGGAAAGAAACTTGTCGCTGGCATGGACGt > 1:289205‑M2/106‑151 (MQ=255) ccgactgggagatgaacaggaggatcatactatgaatgcatttttgcgttttctggatgcagatatccagaacaacccgcaaaaaactcgtccattcaaCATTCAACATTCAACAAGGAAAGAAACTTGTCGCTGGCATGGACGTCAACAt < 2:192135‑M2/52‑1 (MQ=255) cgactgggagatgaacaggaggatcatactatgaatgcatttttgcgttttctggatgcagatatccagaacaacccgcaaaaaactcgtccattcaaCATTCAACATTCAACAAGGAAAGAAACTTGTCGCTGGCATGGACGTCAACAtt > 2:283471‑M2/99‑151 (MQ=255) gactgggagatgaacaggaggatcatactatgaatgcatttttgcgttttctggatgcagatatccagaacaacccgcaaaaaactcgtccattcaaCATTCAACATTCAACAAGGAAAGAAACTTGTCGCTGGCATGGACGTCAACATtg > 2:224155‑M2/98‑151 (MQ=255) gatcatactatgaatgcatttttgcgttttctggatgcagatatccagaacaacccgcaaaaaactcgtccattcaaCATTCAACATTCAACAAGGAAAGAAACTTGTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGcgacgac < 2:404688‑M2/74‑1 (MQ=255) atcatactatgaatgcatttttgcgttttctggatgcagatatccagaacaacccgcaaaaaactcgtccattcaaCATTCAACATTCAACAAGGAAAGAAACTTGTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGcgacgacg > 2:136219‑M2/77‑151 (MQ=255) actatgaatgcatttttgcgctttctggatgcagatatccagaacaacccgcaaaaaactcgtccattcaaCATTCAACATTCAACAAGGAAAGAAACTTGTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGaata < 2:111445‑M2/79‑1 (MQ=255) gaatgcatttttgcgttttctggatgcagatatccagaacaacccgcaaaaaactcgtccattcaaCATTCAACATTCAACAAGGAAAGAAACTTGTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGAt < 1:468960‑M2/85‑1 (MQ=255) ttttgcgttttctggatgcagatatccagaacaacccgcaaaaaactcgtccattcaaCATTCAACATTCAACAAGGAAAGAAACTTGTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCcac < 2:282038‑M2/92‑1 (MQ=255) tttctggatgcagatatccagaacaacccgcaaaaaactcgtccattcaaCATTCAACATTCAACAAGGAAAGAAACTTGTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGtt < 2:424025‑M2/100‑1 (MQ=255) tttctggatgcagatatccagaacaacccgcaaaaaactcgtccattcaaCATTCAACATTCAACAAGGAAAGAAACTTGTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGtt > 2:31367‑M2/51‑150 (MQ=255) ggatgcagatatccagaacaacccgcaaaaaactcgtccattcaaCATTCAACATTCAACAAGGAAAGAAACTTGTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAAt < 2:471546‑M2/103‑1 (MQ=255) agatatccagaacaacccgcaaaaaactcgtccattcaaCATTCAACATTCAACAAGGAAAGAAACTTGTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGgcg < 2:13461‑M2/112‑1 (MQ=255) gatatccagaacaacccgcaaaaaactcgtccattcaaCATTCAACATTCAACAAGGAAAGAAACTTGTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGgcgc < 1:282973‑M2/113‑1 (MQ=255) ccagaacaacccgcaaaaaactcgtccattcaaCATTCAACATTCAACAAGGAAAGAAACTTGTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTatat > 1:472394‑M2/34‑151 (MQ=255) cataacaacccgcaaaaaactcgtccattcaaCATTCAACATTCAACAAGGAAAGAAACTTGTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATg < 1:195356‑M2/119‑1 (MQ=255) acaacccgcaaaaaactcgtccattcaaCATTCAACATTCAACAAGGAAAGAAACTTGTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTc > 1:984‑M2/29‑150 (MQ=255) aacccgcaaaaaactcgtccattcaaCATTCAACATTCAACAAGGAAAGAAACTTGTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATc > 2:406735‑M2/27‑151 (MQ=255) acccgcaaaaaactcgtccattcaaCATTCAACATTCAACAAGGAAAGAAACTTGTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATcc > 2:60558‑M2/26‑151 (MQ=255) cgcaaaaaactcgtccattcaaCATTCAACATTCAACAAGGAAAGAAACTTGTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTg < 1:503407‑M2/129‑1 (MQ=255) gcaaaaaactcgtccattcaaCATTCAACATTCAACAAGGAAAGAAACTTGTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGt < 2:331475‑M2/130‑1 (MQ=255) aaactcgtccattcaaCATTCAACATTCAACAAGGAAAGAAACTTGTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTTTTCa < 2:318835‑M2/135‑1 (MQ=255) cgtccattcaaCATTCAACATTCAACAAGGAAAGAAACTTGTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTTTTCAGGaa > 2:523501‑M2/12‑150 (MQ=255) | CCAGGCCAGGACAGCATTCATTACGAAATTCTGCCTGGTGGGCAAGTATTTATGTGCCGACTGGGAGATGAACAGGAGGATCATACTATGAATGCATTTTTGCGTTTTCTGGATGCAGATATCCAGAACAACCCGCAAAAAACTCGTCCATTCAACATTCAACAAGGAAAGAAACTTGTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTTTTCAGGAA > NC_000913/3277110‑3277396 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |