| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,801,966 | Δ11,843 bp | [nrdE]–[emrB] | [nrdE], nrdF, proV, proW, proX, ygaY, ygaY, ygaZ, ygaH, mprA, emrA, [emrB] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2801966 | 2813808 | 11843 | 24 [0] | [0] 24 | [nrdE]–[emrB] | [nrdE], nrdF, proV, proW, proX, ygaY, ygaY, ygaZ, ygaH, mprA, emrA, [emrB] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2801965 | 0 (0.000) | 24 (0.690) | 23/280 | 0.9 | 100% | coding (618/2145 nt) | nrdE | ribonucleoside‑diphosphate reductase 2, alpha subunit |
| ? | NC_000913 | 2813809 = | 0 (0.000) | coding (1194/1539 nt) | emrB | multidrug efflux system protein | |||||
CAGCCAGCCACGCCAACATTCCTCAACTGCGGTAAGCAGCAGCGCGGCGAACTGGTTTCCTGTTTTTTGCTGCGTATTGAAGACAATATGGAGTCGATTGGTCGGGCGGTAAATTCCGCACTGCAGCTGTCGAAACGCGGCGGCGGCGTAGCATTTTTGCTGTCGAATCTGCGAGAAGCGGGCGCGCCAATTAAACGTATTGAAAATCAATCTTCTGGCGTAATTCCGGTGATGAAAATGCTGGAAGACGCATTTTCCTATGCCAACCAACTCGGCGCTCGT > NC_000913/2801819‑2802100 | cagccagcCACGCCAACATTCCTCAACTGCGGTAAGCAGCAGCGCGGCGAACTGGTTTCCTGTTTTTTGCTGCGTATTGAAGACAATATGGAGTCGATTGGTCGGGCGGTAAATTCCGCACTGCAGCTGTCGAAACGCGGCGGCGGCatcg > 2:414074‑M1/1‑147 (MQ=255) agccagccACGCCAACATTCCTCAACTGCGGTAAGCAGCAGCGCGGCGAACTGGTTTCCTGTTTTTTGCTGCGTATTGAAGACAATATGGAGTCGATTGGTCGGGCGGTAAATTCCGCACTGCAGCTGTCGAAACGCGGCGGCGGCatcga < 1:160024‑M1/151‑6 (MQ=255) gccagccaCGCCAACATTCCTCAACTGCGGTAAGCAGCAGCGCGGCGAACTGGTTTCCTGTTTTTTGCTGCGTATTGAAGACAATATGGAGTCGATTGGTCGGGCGGTAAATTCCGCACTGCAGCTGTCGAAACGCGGCGGCGGCatcgag < 2:466991‑M1/151‑7 (MQ=255) cAACTTCGGTAAGCAGCAGCGCGGCGAACTGGTTTCCTGTTTTTTGCTGCGTATTGAAGACAATATGGAGTCGATTGGTCGGGCGGTAAATTCCGCACTGCAGCTGTCGAAACGCGGCGGCGGCatcgagcctctctaactttacgcgaa < 1:202881‑M1/150‑27 (MQ=255) aaCTGCGGTAAGCAGCAGCGCGGCGAACTGGTTTCCTGTTTTTTGCTGCGTATTGAAGACAATATGGAGTCGATTGGTCGGGCGGTAAATTCCGCACTGCAGCTGTCGAAACGCGGCGGCGGCatcgagcctctctaactttacgcgaac > 2:111495‑M1/1‑123 (MQ=255) gCGGTAAGCAGCAGCGCGGCGAACTGGTTTCCTTTTTTTTGCTGCGTATTGAAGACAATATGGAGTCGATTGGTCGGGCGGTAAATTCCGCACTGCAGCTGTCGAAACGCGGCGGCGGCatcgagcctctctaactttacgcgaacgctg < 1:402058‑M1/150‑32 (MQ=255) gCGGTAAGCAGCAGCGCGGCGAACTGGTTTCCTGTTTTTTGCTGCGTATTGAAGACAATATGGAGTCGATTGGTCGGGCGGTAAATTCCGCACTGCAGCTGTCGAAACGCGGCGGCGGCatcgagcctctctaactttacgcgaacgct < 2:277507‑M1/149‑31 (MQ=255) agcagcagcGCGGCGAACTGGTTTCCTGTTTTTTGCTGCGTATTGAAGACAATATGGAGTCGATTGGTCGGGCGGTAAATTCCGCACTGCAGCTGTCGAAACGCGGCGGCGGCatcgagcctctctaactttacgcgaacgctggcggggt < 2:333854‑M1/151‑39 (MQ=255) cagcaccGCGGCGAACTGGTTGCCTTTTTTTTGCTGCTTATTGAAGACAATATGGAGTCGATTGGTCGGGCGGTAAATTCCGCACTGCAGCTGTCGAAACGCGGCGGCGGCatcgagcctctctaactttacgcgaacgcgggcggggtct < 1:547866‑M1/151‑41 (MQ=255) agcGCGGCGAACTGGTTTCCTGTTTTTTGCTGCGTATTGAAGACAATATGGAGTCGATTGGTCGGGCGGTAAATTCCGCACTGCAGCTGTCGAAACGCGGCGGCGGCatcgagcctctctaactttacgcgaacgctggcggggtctatcg < 2:192421‑M1/151‑45 (MQ=255) gcgAACTGGTTTCCTGTTTTTTGCTGCGTATTGAAGACAATATGGAGTCGATTGGTCGGGCGGTAAATTCCGCACTGCAGCTGTCGAAACGCGGCGGCGGCatcgagcctctctaactttacgcgaacgctggcggggtctatcggcacgt > 2:154676‑M1/1‑101 (MQ=255) gcgAACTGGTTTCCTGTTTTTTGCTGCGTATTGAAGACAATATGGAGTCGATTGGTCGGGCGGTAAATTCCGCACTGCAGCTGTCGAAACGCGGCGGCGGCatcgagcctctctaactttacgcgaacgctggcgggggctctcggcacgt > 1:310412‑M1/1‑101 (MQ=255) cTGGTTTCCTGTTTTTTGCTGCGTATTGAAGACAATATGTAGTCGATTGGTCGGGCGGTAAATTCCGCACTGCAGCTGTCGAAACGCGGCGGCGGCatcgagcctctctaactttacgcgaacgctggcggggtctgtcggcacgtcgat > 1:443362‑M1/1‑96 (MQ=255) ggTTTCCTGTTTTTTGCTGCGTATTGAAGACAATATGGAGTCGATTGGTCGGGCGGTAAATTCCGCACTGCAGCTGTCGAAACGCGGCGGCGGCatcgagcctctctaactttacgcgaacgctggcggggtctatcggcacgtcgataa < 2:158668‑M1/150‑57 (MQ=255) gAAGACAATATGGAGTCGATTGGTCGGGCGGTAAATTCCGCACTGCAGCTGTCGAAACGCGGCGGCGGCatcgagcctctctaactttacgcgaacgctggcggggtctatcggcacgtcgataaccacgaccatgtggaccaaccgcg > 1:41062‑M1/1‑69 (MQ=255) aaGACAATATGGAGTCGATTGGTAGGGGGGTAAATTCCGCACTGCAGCTGTCGAAACGCGGCGGCGGCatcgagcctctctaactttacgcgaaagctggcggggtctatcggcacgccgataaccacgacaatgtggaccaaacgcgag > 2:312980‑M1/1‑68 (MQ=255) gACAATATGGAGTCGATTGGGCGGGCGGTAAATTCCGCACTGCAGTTGTCGAAACGCGGCGGCGGCgtcgagcctctctaactttacgcgaacgctggcggggtctagcggcacgtcgataaccacgaccatgtggaccaaccgcgagtc < 1:414913‑M1/150‑85 (MQ=255) cAATATGGAGTCGATTGGTCGGGCGGTAAATTCCGCACTGCAGCTGTCGAAACGCGGCGGCGGCatcgagcctctctaactttacgcgaacgctggcggggtctatcggcacgtcgataaccacgaccatgtggaccaaccgcgagtcgat < 1:240827‑M1/151‑88 (MQ=255) gATTGGTCGGGCGGTAAATTCCGCACTGCAGCTGTCGAAACGCGGCGGCGGCatcgagcctctctaactttacgcgaacgctggcggggtctatcggcacgtcgataaccacgaccatgtggaccaaccgcgagtcgatgcaccatgcgca < 2:427255‑M1/151‑100 (MQ=255) gATTGGTCGGGCGGTAAATTCCGCACTGCAGCTGTCGAAACGCGGCGGCGGCatcgagcctctctaactttacgcgaacgctggcggggtctatcggcacgtcgataaccacgaccatgtggaccaaccgcgagtcgatgcaccatgcgc > 2:130864‑M1/1‑52 (MQ=255) gCGGTAAATTCCGCACTGCAGCTGTCGAAACGCGGCGGCGGCatcgagcctctctaactttacgcgaacgctggcggggtctatcggcacgtcgataaccacgaccatgtggaccaaccgcgagtcgatgcaccatgcgcagttgactg > 2:72159‑M1/1‑42 (MQ=255) cTGCAGCTGTCGAAACGCGGCGGCGGCatcgagcctctctaactttacgcgaacgctggcggggtctatcggcacgtcgataaccacgaccatgtggaccaaccgcgagtcgatgcaccatgcgcagttgactgagtcggtaaacccgttc > 1:238790‑M1/1‑27 (MQ=255) tGCAGCTGTCGAAACGCGGCGGCGGCatcgagcctctctaactttacgcgaacgctggcggggtctatcggcacgtcgataaccacgaccatgtggaccaaccgcgagtcgatgcaccatgcgcagttgactgagtcggtaaacccgttc > 2:182656‑M1/1‑26 (MQ=255) gAAACGCGGCGGCGGCatcgagcctctctaactttacgcgaacgctggcggggtctatcggcacgtcgataaccacgaccatgtggaccaaccgcgagtcgatgcaccatgcgcagttgactgagtcggtaaacccgttcaacccgaatgc > 1:503327‑M1/1‑16 (MQ=255) | CAGCCAGCCACGCCAACATTCCTCAACTGCGGTAAGCAGCAGCGCGGCGAACTGGTTTCCTGTTTTTTGCTGCGTATTGAAGACAATATGGAGTCGATTGGTCGGGCGGTAAATTCCGCACTGCAGCTGTCGAAACGCGGCGGCGGCGTAGCATTTTTGCTGTCGAATCTGCGAGAAGCGGGCGCGCCAATTAAACGTATTGAAAATCAATCTTCTGGCGTAATTCCGGTGATGAAAATGCTGGAAGACGCATTTTCCTATGCCAACCAACTCGGCGCTCGT > NC_000913/2801819‑2802100 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |