| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,801,966 | Δ11,843 bp | [nrdE]–[emrB] | [nrdE], nrdF, proV, proW, proX, ygaY, ygaY, ygaZ, ygaH, mprA, emrA, [emrB] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2801966 | 2813808 | 11843 | 24 [0] | [0] 24 | [nrdE]–[emrB] | [nrdE], nrdF, proV, proW, proX, ygaY, ygaY, ygaZ, ygaH, mprA, emrA, [emrB] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2801965 | 0 (0.000) | 24 (0.690) | 23/280 | 0.9 | 100% | coding (618/2145 nt) | nrdE | ribonucleoside‑diphosphate reductase 2, alpha subunit |
| ? | NC_000913 | 2813809 = | 0 (0.000) | coding (1194/1539 nt) | emrB | multidrug efflux system protein | |||||
CTGGCGTGCCTATACCTTTGAACCAGGTATGGATTTTGGCGCGTCGGCCTGGCCGCAGTTTATCCAGGGGTTTGCGGTGGCCTGCTTCTTTATGCCGCTGACCACCATTACGCTGTCTGGTTTGCCACCGGAACGACTGGCGGCGGCATCGAGCCTCTCTAACTTTACGCGAACGCTGGCGGGGTCTATCGGCACGTCGATAACCACGACCATGTGGACCAACCGCGAGTCGATGCACCATGCGCAGTTGACTGAGTCGGTAAACCCGTTCAACCCGAATGC > NC_000913/2813662‑2813943 | cagccagccacgccaacattcctcaactgcggtaagcagcagcgcggcgaactggtttcctgttttttgctgcgtattgaagacaatatggagtcgattggtcgggcggtaaattccgcactgcagctgtcgaaacgcggcggcggcATCg > 2:414074‑M2/148‑151 (MQ=255) agccagccacgccaacattcctcaactgcggtaagcagcagcgcggcgaactggtttcctgttttttgctgcgtattgaagacaatatggagtcgattggtcgggcggtaaattccgcactgcagctgtcgaaacgcggcggcggcATCGa < 1:160024‑M2/5‑1 (MQ=255) gccagccacgccaacattcctcaactgcggtaagcagcagcgcggcgaactggtttcctgttttttgctgcgtattgaagacaatatggagtcgattggtcgggcggtaaattccgcactgcagctgtcgaaacgcggcggcggcATCGAg < 2:466991‑M2/6‑1 (MQ=255) caacttcggtaagcagcagcgcggcgaactggtttcctgttttttgctgcgtattgaagacaatatggagtcgattggtcgggcggtaaattccgcactgcagctgtcgaaacgcggcggcggcATCGAGCCTCTCTAACTTTACGCGaa < 1:202881‑M2/26‑1 (MQ=255) aactgcggtaagcagcagcgcggcgaactggtttcctgttttttgctgcgtattgaagacaatatggagtcgattggtcgggcggtaaattccgcactgcagctgtcgaaacgcggcggcggcATCGAGCCTCTCTAACTTTACGCGAAc > 2:111495‑M2/124‑150 (MQ=255) gcggtaagcagcagcgcggcgaactggtttccttttttttgctgcgtattgaagacaatatggagtcgattggtcgggcggtaaattccgcactgcagctgtcgaaacgcggcggcggcATCGAGCCTCTCTAACTTTACGCGAACGCTg < 1:402058‑M2/31‑1 (MQ=255) gcggtaagcagcagcgcggcgaactggtttcctgttttttgctgcgtattgaagacaatatggagtcgattggtcgggcggtaaattccgcactgcagctgtcgaaacgcggcggcggcATCGAGCCTCTCTAACTTTACGCGAACGCt < 2:277507‑M2/30‑1 (MQ=255) agcagcagcgcggcgaactggtttcctgttttttgctgcgtattgaagacaatatggagtcgattggtcgggcggtaaattccgcactgcagctgtcgaaacgcggcggcggcATCGAGCCTCTCTAACTTTACGCGAACGCTGGCGGGGt < 2:333854‑M2/38‑1 (MQ=255) cagcaccgcggcgaactggttgccttttttttgctgcttattgaagacaatatggagtcgattggtcgggcggtaaattccgcactgcagctgtcgaaacgcggcggcggcATCGAGCCTCTCTAACTTTACGCGAACGCGGGCGGGGTCt < 1:547866‑M2/40‑1 (MQ=255) agcgcggcgaactggtttcctgttttttgctgcgtattgaagacaatatggagtcgattggtcgggcggtaaattccgcactgcagctgtcgaaacgcggcggcggcATCGAGCCTCTCTAACTTTACGCGAACGCTGGCGGGGTCTATCg < 2:192421‑M2/44‑1 (MQ=255) gcgaactggtttcctgttttttgctgcgtattgaagacaatatggagtcgattggtcgggcggtaaattccgcactgcagctgtcgaaacgcggcggcggcATCGAGCCTCTCTAACTTTACGCGAACGCTGGCGGGGTCTATCGGCACGt > 2:154676‑M2/102‑151 (MQ=255) gcgaactggtttcctgttttttgctgcgtattgaagacaatatggagtcgattggtcgggcggtaaattccgcactgcagctgtcgaaacgcggcggcggcATCGAGCCTCTCTAACTTTACGCGAACGCTGGCGGGGGCTCTCGGCACGt > 1:310412‑M2/102‑151 (MQ=255) ctggtttcctgttttttgctgcgtattgaagacaatatgtagtcgattggtcgggcggtaaattccgcactgcagctgtcgaaacgcggcggcggcATCGAGCCTCTCTAACTTTACGCGAACGCTGGCGGGGTCTGTCGGCACGTCGAt > 1:443362‑M2/97‑150 (MQ=255) ggtttcctgttttttgctgcgtattgaagacaatatggagtcgattggtcgggcggtaaattccgcactgcagctgtcgaaacgcggcggcggcATCGAGCCTCTCTAACTTTACGCGAACGCTGGCGGGGTCTATCGGCACGTCGATaa < 2:158668‑M2/56‑1 (MQ=255) gaagacaatatggagtcgattggtcgggcggtaaattccgcactgcagctgtcgaaacgcggcggcggcATCGAGCCTCTCTAACTTTACGCGAACGCTGGCGGGGTCTATCGGCACGTCGATAACCACGACCATGTGGACCAACcgcg > 1:41062‑M2/70‑149 (MQ=255) aagacaatatggagtcgattggtaggggggtaaattccgcactgcagctgtcgaaacgcggcggcggcATCGAGCCTCTCTAACTTTACGCGAAAGCTGGCGGGGTCTATCGGCACGCCGATAACCACGACAATGTGGACCAAACGCGAg > 2:312980‑M2/69‑150 (MQ=255) gacaatatggagtcgattgggcgggcggtaaattccgcactgcagttgtcgaaacgcggcggcggcGTCGAGCCTCTCTAACTTTACGCGAACGCTGGCGGGGTCTAGCGGCACGTCGATAACCACGACCATGTGGACCAACCGCGAGTc < 1:414913‑M2/84‑1 (MQ=255) caatatggagtcgattggtcgggcggtaaattccgcactgcagctgtcgaaacgcggcggcggcATCGAGCCTCTCTAACTTTACGCGAACGCTGGCGGGGTCTATCGGCACGTCGATAACCACGACCATGTGGACCAACCGCGAGTCGAt < 1:240827‑M2/87‑1 (MQ=255) gattggtcgggcggtaaattccgcactgcagctgtcgaaacgcggcggcggcATCGAGCCTCTCTAACTTTACGCGAACGCTGGCGGGGTCTATCGGCACGTCGATAACCACGACCATGTGGACCAACCGCGAGTCGATGCACCATgcgc > 2:130864‑M2/53‑150 (MQ=255) gattggtcgggcggtaaattccgcactgcagctgtcgaaacgcggcggcggcATCGAGCCTCTCTAACTTTACGCGAACGCTGGCGGGGTCTATCGGCACGTCGATAACCACGACCATGTGGACCAACCGCGAGTCGATGCACCATGCGCa < 2:427255‑M2/99‑1 (MQ=255) gcggtaaattccgcactgcagctgtcgaaacgcggcggcggcATCGAGCCTCTCTAACTTTACGCGAACGCTGGCGGGGTCTATCGGCACGTCGATAACCACGACCATGTGGACCAACCGCGAGTCGATGCACCATGCGCAGTTGACTg > 2:72159‑M2/43‑149 (MQ=255) ctgcagctgtcgaaacgcggcggcggcATCGAGCCTCTCTAACTTTACGCGAACGCTGGCGGGGTCTATCGGCACGTCGATAACCACGACCATGTGGACCAACCGCGAGTCGATGCACCATGCGCAGTTGACTGAGTCGGTAAACCCGTTc > 1:238790‑M2/28‑151 (MQ=255) tgcagctgtcgaaacgcggcggcggcATCGAGCCTCTCTAACTTTACGCGAACGCTGGCGGGGTCTATCGGCACGTCGATAACCACGACCATGTGGACCAACCGCGAGTCGATGCACCATGCGCAGTTGACTGAGTCGGTAAACCCGTTc > 2:182656‑M2/27‑150 (MQ=255) gaaacgcggcggcggcATCGAGCCTCTCTAACTTTACGCGAACGCTGGCGGGGTCTATCGGCACGTCGATAACCACGACCATGTGGACCAACCGCGAGTCGATGCACCATGCGCAGTTGACTGAGTCGGTAAACCCGTTCAACCCGAATGc > 1:503327‑M2/17‑151 (MQ=255) | CTGGCGTGCCTATACCTTTGAACCAGGTATGGATTTTGGCGCGTCGGCCTGGCCGCAGTTTATCCAGGGGTTTGCGGTGGCCTGCTTCTTTATGCCGCTGACCACCATTACGCTGTCTGGTTTGCCACCGGAACGACTGGCGGCGGCATCGAGCCTCTCTAACTTTACGCGAACGCTGGCGGGGTCTATCGGCACGTCGATAACCACGACCATGTGGACCAACCGCGAGTCGATGCACCATGCGCAGTTGACTGAGTCGGTAAACCCGTTCAACCCGAATGC > NC_000913/2813662‑2813943 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |