| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,685,181 | Δ273 bp | coding (166‑438/1989 nt) | yhjK ← | cyclic‑di‑GMP phosphodiesterase |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3685181 | 3685453 | 273 | 22 [0] | [0] 22 | yhjK | cyclic‑di‑GMP phosphodiesterase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3685180 | 0 (0.000) | 22 (0.890) | 20/296 | 0.4 | 100% | coding (439/1989 nt) | yhjK | cyclic‑di‑GMP phosphodiesterase |
| ? | NC_000913 | 3685454 = | 0 (0.000) | coding (165/1989 nt) | yhjK | cyclic‑di‑GMP phosphodiesterase | |||||
CGCTCTGGAATAAAACTTTTACGCAGCGCCTGGAACTGGTTAGGCAGCACTACATCGGCACGGCTGACCACGCCTGCCGGTTTAATGCTGGCAAGAATAGCTTCCGCTTCGGGAATATCGCCTTTCAAAATAGCTGAAGATAAGGGTTCGCGGACAGAGCGAGCAATGCTTTCCAGTTGCGTAGCCGTGTTATAGCGATTCTGCTGGACCAGATGGAACAGCAAAACGGTGCAAAAAATAAAAACGAACACCAGGACAACGGCTGCCACCATTGCCATCTGCTTGATTGTTAACG > NC_000913/3685308‑3685602 | gcgttaagttcgcgagcaatattgcgtaacggatgcaaaatcaggcggttaatgcaccagctgatggcgacggtcaggataagcgacaaaagtaagtaaatggtcactaacgttgagagggtgctcatcacgaacttatacatacgTTcg < 1:333572‑M2/4‑1 (MQ=255) tcgcgagcaatattgcgtaacggatgcaaaatcaggcggttaatgcaccagctgatggcgacggtcaggataagcgacaaaagtaagtaaatggtcactaacgttgagagggtgctcatcacgaacttatacatacgTTCGCGGACagag < 2:299237‑M2/13‑1 (MQ=255) cgagcaatattgcgtaacggatgcaaaatcaggcggttaatgcaccagctgatggcgacggtcaggataagcgacaaaagtaagtaaatggtcactaacgttgagagggtgctcatcacgaacttatacatacgTTCGCGGACAgagcgag < 2:188521‑M2/17‑1 (MQ=255) attgcgtaacggatgcaaaatcaggcggttaatgcaccagctgatggtgacgggcaggataagcgacaaaaggaagtaaatggtcactaacgttgagagggtgctcatcacgaacttatacatacgTTCGCGGACAGAGCGAGCAATGCtt > 1:125927‑M2/127‑151 (MQ=255) gcgtaacggatgcaaaatcaggcggttaatgcaccagctgatggcgacggtcaggataagcgacaaaagtaagtaaatggtcactaacgttgagagggtgctcatcacgaacttatacatacgTTCGCGGACAGAGCGAGCAATGCTTTcc > 2:262901‑M2/124‑151 (MQ=255) caccagctgatggcgacggtcacgataagcgacaaaagtaagtaaatggtcactaacgttgagagggtgctcatcacgaacttatacatacgTTCGCGGACAGAGCGAGCAATGCTTTCCAGTTGCGTAGCCGTGTTATAGCGATTctgct < 1:75921‑M2/59‑1 (MQ=255) gatggcgacggtcaggataagcgacaaaagtaagtaaatggtcactaacgttgagagggtgctcatcacgaacttatacatacgTTCGCGGACAGAGCGAGCAATGCTTTCCAGTTGCGTAGCCGTGTTATAGCGATTCTGCTGGACCAg < 2:388953‑M2/66‑1 (MQ=255) acggtcaggataagcgacaaaagtaagtaaatggtcactaacgttgagagggtgctcatcacgaacttatacatacgTTCGCGGACAGAGCGAGCAATGCTTTCCAGTTGCGTAGCCGTGTTATAGCGATTCTGCTGGACCAGATGGAAc > 1:167580‑M2/78‑150 (MQ=255) cggtcaggataagcgacaaaagtaagtaaatggtcactaacgttgagagggtgctcatcacgaacttatacatacgTTCGCGGACAGAGCGAGCAATGCTTTCCAGTTGCGTAGCCGTGTTATAGCGATTCTGCTGGACCAGATGGAACAg < 1:57094‑M2/75‑1 (MQ=255) cggtcaggataagcgacaaaagtaagtaaatggtcactaacgttgagagggtgctcatcacgaacttatacatacgTTCGCGGACAGAGCGAGCAATGCTTTCCAGTTGCGTAGCCGTGTTATAGCGATTCTGCTGGACCAGATGGAACAg < 1:20587‑M2/75‑1 (MQ=255) ggtcaggataagcgacaaaagtaagtaaatggtcactaacgttgagagggtgctcatcacgaacttatacatacgTTCGCGGACAGAGCGAGCAATGCTTTCCAGTTGCGTAGCCGTGTTATAGCGATTCTGCTGGACCAGATGGAACAGc < 1:296418‑M2/76‑1 (MQ=255) ggtcaggataagcgacaaaagtaagtaaatggtcactaacgttgagagggtgctcatcacgaacttatacatacgTTCGCGGACAGAGCGAGCAATGCTTTCCAGTTGCGTAGCCGTGTTATAGCGATTCTGCTGGACCAGATGGAACAGc < 2:84003‑M2/76‑1 (MQ=255) gcgacaaaagtaagtaaatggtcactaacgttgagagggtgctcatcacgaacttatacatacgTTCGCGGACAGAGCGAGCAATGCTTTCCAGTTGCGTAGCCGTGTTATAGCGATTCTGCTGGACCAGATGGAACAGCAAAACGGTGCa < 2:235758‑M2/87‑1 (MQ=255) aaagtaagtaaatggtcactaacgttgagcgggtgctaatcacgaccttatacatacgTTCGCGGACAGAGCGAGCAATGCTTTCCAGTTGCGTAGCCGTGTTATAGCGATTCTGCTGGACCAGATGGAACAGCAAAACGGTGCAAAAAAt < 1:330246‑M2/93‑1 (MQ=255) aatggtcactaacgttgagagggtgctcatcacgaacttatacatacgTTCGCGGACAGAGCGAGCAATGCTTTCCAGTTGCGTAGCCGTGTTATAGCGATTCTGCTGGACCAGATGGAACAGCAAAACGGTGCAAAAAATAAAAACGAac < 2:293156‑M2/103‑1 (MQ=255) cactaacgttgagagggtgctcatcacgaacttatacatacgTTCGCGGACAGAGCGAGCAATGCTTTCCAGTTGCGTAGCCGTGTTATAGCGATTCTGCTGGACCAGATGGAACAGCAAAACGGTGCAAAAAATAAAAACGAACACCAgg > 1:198440‑M2/43‑151 (MQ=255) aacgttgagagggtgctcatcacgaacttatacatacgTTCGCGGACAGAGCGAGCAATGCTTTCCAGTTGCGTAGCCGTGTTATAGCGATTCTGCTGGACCAGATGGAACAGCAAAACGGTGCAAAAAATAAAAACGAACTCCAGGAc < 1:291048‑M2/111‑1 (MQ=255) gtgctcatcacgaacttatacatacgTTCGCGGACAGAGCGAGCAATGCTTTCCAGTTGCGTAGCCGTGTTATAGCGATTCTGCTGGACCAGATGGAACAGCAAAACGGTGCAAAAAATAAAAACGAACACCAGGACAACGGCTGccacca < 1:113449‑M2/125‑1 (MQ=255) catcacgaacttatacatacgTTCGCGGACAGAGCGAGCAATGCTTTCCAGTTGCGTAGCCGTGTTATAGCGATTCTGCTGGACCAGATGGAACAGCAAAACGGTGCAAAAAATAAAAACGAACACCAGGACAACGGCTGCCACCATTGcc > 1:351240‑M2/22‑151 (MQ=255) aacttatacatacgTTCGCGGACAGAGCGAGCAATGCTTTCCAGTTGAGTAGCCGTGTTATAGCGATTCTGCTGGACCAGATGGAACAGCAAAACGGTGCAAAAAATAAAAAAGAACACCAGGACAACGGCTGCAACCATTGCCATCt > 1:82651‑M2/15‑148 (MQ=255) acgTTCGCGGACAGAGCGAGCAATGCTTTCCAGTTGCGTAGCCGTGTTATAGCGATTCTGCTGGACCAGATGGAACAGCAAAACGGTGCAAAAAATAAAAACGAACACCAGGACAACGGCTGCCACCATTGCCATCTGCTTGATTGTTAAc < 2:212464‑M2/148‑1 (MQ=255) cgTTCGCGGACAGAGCGAGCAATGCTTTCCAGTTGCGTAGCCGTGTTATAGCGATTCTGCTGGACCAGATGGAACAGCAAAACGGTGCAAAAAATAAAAACGAACACCAGGACAACGGCTGCCACCATTGCCATCTGCTTGATTGTTAACg < 2:337081‑M2/149‑1 (MQ=255) | CGCTCTGGAATAAAACTTTTACGCAGCGCCTGGAACTGGTTAGGCAGCACTACATCGGCACGGCTGACCACGCCTGCCGGTTTAATGCTGGCAAGAATAGCTTCCGCTTCGGGAATATCGCCTTTCAAAATAGCTGAAGATAAGGGTTCGCGGACAGAGCGAGCAATGCTTTCCAGTTGCGTAGCCGTGTTATAGCGATTCTGCTGGACCAGATGGAACAGCAAAACGGTGCAAAAAATAAAAACGAACACCAGGACAACGGCTGCCACCATTGCCATCTGCTTGATTGTTAACG > NC_000913/3685308‑3685602 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |