| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,685,181 | Δ273 bp | coding (166‑438/1989 nt) | yhjK ← | cyclic‑di‑GMP phosphodiesterase |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3685181 | 3685453 | 273 | 22 [0] | [0] 22 | yhjK | cyclic‑di‑GMP phosphodiesterase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3685180 | 0 (0.000) | 22 (0.890) | 20/296 | 0.4 | 100% | coding (439/1989 nt) | yhjK | cyclic‑di‑GMP phosphodiesterase |
| ? | NC_000913 | 3685454 = | 0 (0.000) | coding (165/1989 nt) | yhjK | cyclic‑di‑GMP phosphodiesterase | |||||
GCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGCAAAATCAGGCGGTTAATGCACCAGCTGATGGCGACGGTCAGGATAAGCGACAAAAGTAAGTAAATGGTCACTAACGTTGAGAGGGTGCTCATCACGAACTTATACATACGGAAGGAATCCGCCTGTAGTACCAGATAGGCAATTGGCTGCGGGTTTGCCGGACGTTCGAGCGAGTAAACGCCCAGCGAGATTTGAACCGGTAGCTCAAACAGGCGAGTAACCATTACCGGCACCGGGCGCTCTGGAATAAAACTTTTAC > NC_000913/3685035‑3685329 | gCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGCAAAATCAGGCGGTTAATGCACCAGCTGATGGCGACGGTCAGGATAAGCGACAAAAGTAAGTAAATGGTCACTAACGTTGAGAGGGTGCTCATCACGAACTTATACATACGttcg < 1:333572‑M1/150‑5 (MQ=255) tCGCGAGCAATATTGCGTAACGGATGCAAAATCAGGCGGTTAATGCACCAGCTGATGGCGACGGTCAGGATAAGCGACAAAAGTAAGTAAATGGTCACTAACGTTGAGAGGGTGCTCATCACGAACTTATACATACGttcgcggacagag < 2:299237‑M1/150‑14 (MQ=255) cgAGCAATATTGCGTAACGGATGCAAAATCAGGCGGTTAATGCACCAGCTGATGGCGACGGTCAGGATAAGCGACAAAAGTAAGTAAATGGTCACTAACGTTGAGAGGGTGCTCATCACGAACTTATACATACGttcgcggacagagcgag < 2:188521‑M1/151‑18 (MQ=255) atTGCGTAACGGATGCAAAATCAGGCGGTTAATGCACCAGCTGATGGTGACGGGCAGGATAAGCGACAAAAGGAAGTAAATGGTCACTAACGTTGAGAGGGTGCTCATCACGAACTTATACATACGttcgcggacagagcgagcaatgctt > 1:125927‑M1/1‑126 (MQ=255) gCGTAACGGATGCAAAATCAGGCGGTTAATGCACCAGCTGATGGCGACGGTCAGGATAAGCGACAAAAGTAAGTAAATGGTCACTAACGTTGAGAGGGTGCTCATCACGAACTTATACATACGttcgcggacagagcgagcaatgctttcc > 2:262901‑M1/1‑123 (MQ=255) cACCAGCTGATGGCGACGGTCACGATAAGCGACAAAAGTAAGTAAATGGTCACTAACGTTGAGAGGGTGCTCATCACGAACTTATACATACGttcgcggacagagcgagcaatgctttccagttgcgtagccgtgttatagcgattctgct < 1:75921‑M1/151‑60 (MQ=255) gATGGCGACGGTCAGGATAAGCGACAAAAGTAAGTAAATGGTCACTAACGTTGAGAGGGTGCTCATCACGAACTTATACATACGttcgcggacagagcgagcaatgctttccagttgcgtagccgtgttatagcgattctgctggaccag < 2:388953‑M1/150‑67 (MQ=255) aCGGTCAGGATAAGCGACAAAAGTAAGTAAATGGTCACTAACGTTGAGAGGGTGCTCATCACGAACTTATACATACGttcgcggacagagcgagcaatgctttccagttgcgtagccgtgttatagcgattctgctggaccagatggaac > 1:167580‑M1/1‑77 (MQ=255) cGGTCAGGATAAGCGACAAAAGTAAGTAAATGGTCACTAACGTTGAGAGGGTGCTCATCACGAACTTATACATACGttcgcggacagagcgagcaatgctttccagttgcgtagccgtgttatagcgattctgctggaccagatggaacag < 1:57094‑M1/151‑76 (MQ=255) cGGTCAGGATAAGCGACAAAAGTAAGTAAATGGTCACTAACGTTGAGAGGGTGCTCATCACGAACTTATACATACGttcgcggacagagcgagcaatgctttccagttgcgtagccgtgttatagcgattctgctggaccagatggaacag < 1:20587‑M1/151‑76 (MQ=255) ggTCAGGATAAGCGACAAAAGTAAGTAAATGGTCACTAACGTTGAGAGGGTGCTCATCACGAACTTATACATACGttcgcggacagagcgagcaatgctttccagttgcgtagccgtgttatagcgattctgctggaccagatggaacagc < 1:296418‑M1/151‑77 (MQ=255) ggTCAGGATAAGCGACAAAAGTAAGTAAATGGTCACTAACGTTGAGAGGGTGCTCATCACGAACTTATACATACGttcgcggacagagcgagcaatgctttccagttgcgtagccgtgttatagcgattctgctggaccagatggaacagc < 2:84003‑M1/151‑77 (MQ=255) gCGACAAAAGTAAGTAAATGGTCACTAACGTTGAGAGGGTGCTCATCACGAACTTATACATACGttcgcggacagagcgagcaatgctttccagttgcgtagccgtgttatagcgattctgctggaccagatggaacagcaaaacggtgca < 2:235758‑M1/151‑88 (MQ=255) aaaGTAAGTAAATGGTCACTAACGTTGAGCGGGTGCTAATCACGACCTTATACATACGttcgcggacagagcgagcaatgctttccagttgcgtagccgtgttatagcgattctgctggaccagatggaacagcaaaacggtgcaaaaaat < 1:330246‑M1/151‑94 (MQ=255) aaTGGTCACTAACGTTGAGAGGGTGCTCATCACGAACTTATACATACGttcgcggacagagcgagcaatgctttccagttgcgtagccgtgttatagcgattctgctggaccagatggaacagcaaaacggtgcaaaaaataaaaacgaac < 2:293156‑M1/151‑104 (MQ=255) cACTAACGTTGAGAGGGTGCTCATCACGAACTTATACATACGttcgcggacagagcgagcaatgctttccagttgcgtagccgtgttatagcgattctgctggaccagatggaacagcaaaacggtgcaaaaaataaaaacgaacaccagg > 1:198440‑M1/1‑42 (MQ=255) aaCGTTGAGAGGGTGCTCATCACGAACTTATACATACGttcgcggacagagcgagcaatgctttccagttgcgtagccgtgttatagcgattctgctggaccagatggaacagcaaaacggtgcaaaaaataaaaacgaactccaggac < 1:291048‑M1/149‑112 (MQ=255) gTGCTCATCACGAACTTATACATACGttcgcggacagagcgagcaatgctttccagttgcgtagccgtgttatagcgattctgctggaccagatggaacagcaaaacggtgcaaaaaataaaaacgaacaccaggacaacggctgccacca < 1:113449‑M1/151‑126 (MQ=255) catcaCGAACTTATACATACGttcgcggacagagcgagcaatgctttccagttgcgtagccgtgttatagcgattctgctggaccagatggaacagcaaaacggtgcaaaaaataaaaacgaacaccaggacaacggctgccaccattgcc > 1:351240‑M1/1‑21 (MQ=255) aaCTTATACATACGttcgcggacagagcgagcaatgctttccagttgagtagccgtgttatagcgattctgctggaccagatggaacagcaaaacggtgcaaaaaataaaaaagaacaccaggacaacggctgcaaccattgccatct > 1:82651‑M1/1‑14 (MQ=255) acGttcgcggacagagcgagcaatgctttccagttgcgtagccgtgttatagcgattctgctggaccagatggaacagcaaaacggtgcaaaaaataaaaacgaacaccaggacaacggctgccaccattgccatctgcttgattgttaac < 2:212464‑M1/151‑149 (MQ=255) cGttcgcggacagagcgagcaatgctttccagttgcgtagccgtgttatagcgattctgctggaccagatggaacagcaaaacggtgcaaaaaataaaaacgaacaccaggacaacggctgccaccattgccatctgcttgattgttaacg < 2:337081‑M1/151‑150 (MQ=255) | GCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGCAAAATCAGGCGGTTAATGCACCAGCTGATGGCGACGGTCAGGATAAGCGACAAAAGTAAGTAAATGGTCACTAACGTTGAGAGGGTGCTCATCACGAACTTATACATACGGAAGGAATCCGCCTGTAGTACCAGATAGGCAATTGGCTGCGGGTTTGCCGGACGTTCGAGCGAGTAAACGCCCAGCGAGATTTGAACCGGTAGCTCAAACAGGCGAGTAACCATTACCGGCACCGGGCGCTCTGGAATAAAACTTTTAC > NC_000913/3685035‑3685329 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |