| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,377,359 | Δ18 bp | coding (45‑62/639 nt) | sspA ← | stringent starvation protein A, phage P1 late gene activator, RNAP‑associated acid‑resistance protein, inactive glutathione S‑transferase homolog |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3377359 | 3377376 | 18 | 105 [0] | [0] 106 | sspA | stringent starvation protein A, phage P1 late gene activator, RNAP‑associated acid‑resistance protein, inactive glutathione S‑transferase homolog |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3377358 | 0 (0.000) | 105 (1.190) | 86/298 | 0.0 | 100% | coding (63/639 nt) | sspA | stringent starvation protein A, phage P1 late gene activator, RNAP‑associated acid‑resistance protein, inactive glutathione S‑transferase homolog |
| ? | NC_000913 | 3377377 = | 0 (0.000) | coding (44/639 nt) | sspA | stringent starvation protein A, phage P1 late gene activator, RNAP‑associated acid‑resistance protein, inactive glutathione S‑transferase homolog | |||||
Only 100 of 105 total aligned reads displayed.
CACAGGGTCAGCTCACGATCCACCAGGGTCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTATAGATGTCAGTAGGACCGGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAATAAGGAACGA > NC_000913/3377212‑3377505 | cacaGGGTCAGCTCACGATCCACCAGGGTCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaa < 1:908934‑M1/151‑5 (MQ=255)cacaGGGTCAGCTCACGATCCACCAGGGTCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaa > 2:1302655‑M1/1‑147 (MQ=255) acaGGGTCAGCTCACGATCCACCAGGGTCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaa > 2:795314‑M1/1‑146 (MQ=255) acaGGGTCAGCTCACGATCCACCAGGGTCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTGTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaa < 1:565073‑M1/151‑6 (MQ=255) aGGGTCAGCTCACGATCCACCAGGGTCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaaca < 1:909848‑M1/151‑8 (MQ=255) ggTCAGCTCACGATCCACCAGGGTCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagc > 1:223966‑M1/1‑142 (MQ=255) tCAGCTCACGATCCACCAGGGTCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgt > 1:762141‑M1/1‑140 (MQ=255) tCAGCTCACGATCCACCAGGGTCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgt > 1:881692‑M1/1‑140 (MQ=255) cAGCTCACGATCCACCAGGGTCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtc < 1:393085‑M1/151‑13 (MQ=255) cAGCTCACGATCCACCAGGGTCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtc < 1:794687‑M1/151‑13 (MQ=255) cAGCTCACGATCCACCAGGGTCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtc < 2:1347644‑M1/151‑13 (MQ=255) aGCTCACGATCCACCAGGGTCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtca < 1:717245‑M1/151‑14 (MQ=255) aGCTCACGATCCACCAGGGTCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtc > 1:1179098‑M1/1‑138 (MQ=255) aGCTCACGATCCACCAGGGTCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtc > 1:941792‑M1/1‑138 (MQ=255) cTCACGATCCACCAGGGTCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcatt > 2:592916‑M1/1‑136 (MQ=255) tCACGATCCACCAGGGTCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcatt > 2:482094‑M1/1‑135 (MQ=255) cACGATCCACCAGGGTCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattac > 2:746752‑M1/1‑134 (MQ=255) cACGATCCACCAGGGTCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattac > 2:295676‑M1/1‑134 (MQ=255) cACGATCCACCAGGGTCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattac > 1:866098‑M1/1‑134 (MQ=255) cGATCCACCAGGGTCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccg < 1:1157160‑M1/151‑20 (MQ=255) ccaccaGGGTCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacg < 2:416435‑M1/151‑24 (MQ=255) ccaGGGTCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgtaaacagcgtcattaccgaacgttt < 1:469297‑M1/151‑27 (MQ=255) ccaGGGTCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgttt > 1:519284‑M1/1‑125 (MQ=255) caGGGTCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttg < 1:507460‑M1/151‑28 (MQ=255) caGGGTCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACGTACACCGGTCTCAGCCAGCACAATGCGGACCTGAGGGCTAgaaaacagcgtcattaccgaacgtttg < 1:220310‑M1/151‑28 (MQ=255) gggTCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACCCCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgtt < 1:103835‑M1/151‑30 (MQ=255) ggTCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcttcattaccgaacgtttgttg < 1:1188922‑M1/151‑31 (MQ=255) cGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGGGTTCGATCTCGAAACTTACTCCATTCTCAGCCAGCGCAATGCGGACCTGATGGCTAgaaaacggcgtcattaccgaacgtttgttggca < 1:476638‑M1/151‑34 (MQ=255) ggAACGCTCTGATTCTGGTTGACGTCAATCAGAGCCTGAGGCGGATTGTCCTTTTCCACGTGTGCGATCGCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtgtgttggca < 1:1033819‑M1/150‑34 (MQ=255) gAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagc > 2:92682‑M1/1‑116 (MQ=255) aCGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcg > 2:914241‑M1/1‑114 (MQ=255) gCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgaca < 2:1314043‑M1/151‑40 (MQ=255) gATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccat > 2:806962‑M1/1‑107 (MQ=255) gATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagcca < 2:137104‑M1/150‑44 (MQ=255) aTTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatg < 1:115832‑M1/151‑46 (MQ=255) cGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaa < 2:117671‑M1/151‑49 (MQ=255) gggTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTAATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaa > 1:332052‑M1/1‑102 (MQ=255) ggTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaac < 2:514256‑M1/151‑51 (MQ=255) gTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACTTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacc > 2:781168‑M1/1‑100 (MQ=255) gTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacc > 1:1284514‑M1/1‑100 (MQ=255) ttGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacct > 2:456506‑M1/1‑99 (MQ=255) gAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctcc > 1:1305609‑M1/1‑97 (MQ=255) gAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctcc > 1:168102‑M1/1‑97 (MQ=255) gAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctc < 2:330163‑M1/150‑54 (MQ=255) ggTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctccag < 1:843492‑M1/151‑57 (MQ=255) tCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctccaggt > 2:245828‑M1/1‑93 (MQ=255) tCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctccag > 1:843677‑M1/1‑93 (MQ=255) tCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctccaggtat > 1:1126693‑M1/1‑89 (MQ=255) cAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctccaggtatagt > 2:18617‑M1/1‑88 (MQ=255) aGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctccaggtatagtc > 2:932205‑M1/1‑87 (MQ=255) ccTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctccaggtatagtcaga > 2:866902‑M1/1‑83 (MQ=255) cTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctccaggtatagtcagaat > 1:236993‑M1/1‑82 (MQ=255) gAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctccaggtatagtcagaattt > 2:1262237‑M1/1‑80 (MQ=255) gAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctccaggtatagtcagaatt < 1:148401‑M1/150‑71 (MQ=255) gAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctccaggtatagtcagaat < 2:167848‑M1/149‑70 (MQ=255) gATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctccaggtatagtcagaatttttactg < 2:935376‑M1/151‑78 (MQ=255) ttGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctccaggtatagtcagaatttttactgct > 2:1260538‑M1/1‑72 (MQ=255) ttGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctccaggtatagtcagaatctttactgct > 2:1040901‑M1/1‑72 (MQ=255) ccTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctccaggtatagtcagaatttttactgctacc > 1:405666‑M1/1‑68 (MQ=255) ccTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctccaggtatagtcagaatttttactgctacc > 2:504189‑M1/1‑68 (MQ=255) tttCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctccaggtatagtcagaatttttactgctaccagcc > 2:206943‑M1/1‑65 (MQ=255) ccACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctccaggtatagtcagaatttttactgctaccagccacc > 2:489940‑M1/1‑62 (MQ=255) cACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctccaggtatagtcagaatttttactgctaccagccacc > 1:1355411‑M1/1‑61 (MQ=255) aCGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctccaggtatagtcagaatttttactgctaccagccacc > 2:63530‑M1/1‑60 (MQ=255) aCGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctccaggtatagtcagaattattactgctaccagccacc > 2:480803‑M1/1‑60 (MQ=255) cGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctccaggtatagtcagaatttttactgctaccagccaccag < 1:986201‑M1/150‑92 (MQ=255) gtgtTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctccaggtatagtcagaatttttactgctaccagccaccaggt < 1:638314‑M1/151‑94 (MQ=255) gtgtTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctccaggtatagtcagaatttttactgctaccagccaccaggt > 1:593361‑M1/1‑58 (MQ=255) cGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctccaggtatagtcagaatttttactgctaccagccaccaggtggccagtca < 2:786277‑M1/149‑103 (MQ=255) cGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctccaggtatagtcagaatttttactgctaccagccaccaggtggcca < 2:1350137‑M1/145‑99 (MQ=255) cGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctccaggtatagtcagaatttttactgctaccagccaccaggtggcca < 1:369617‑M1/145‑99 (MQ=255) gAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctccaggtatagtcagaatttttactgctaccagccaccaggtggccagtca < 1:848225‑M1/148‑103 (MQ=255) aCTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctccaggtatagtcagaatttttactgctaccagccaccaggtggccagtcagaagtt < 2:387002‑M1/151‑109 (MQ=255) tACACCTTTCTCAGCCAGCACAATGCGGAACTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctccaggtatagtcagaatttttactgctaccagccaccaggtggccagtcagaagttgtg > 1:53268‑M1/1‑40 (MQ=255) acacCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctccaggtatagtcagaatttttactgctaccagccaccaggtggccagtcagaagttgtgt > 2:419574‑M1/1‑39 (MQ=255) acacCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctccaggtatagtcagaatttttactgctaccagccaccaggtggccagtcagaagttgtgt > 2:322724‑M1/1‑39 (MQ=255) acacCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctccaggtatagtcagaatttttactgctaccagccaccaggtggccagtcagaagttgtg < 1:17615‑M1/150‑112 (MQ=255) acCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctccaggtatagtcagaatttttactgctaccagccaccaggtggccagtcagaagttgtgtt > 1:802230‑M1/1‑37 (MQ=255) ttCTCAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctccaggtatagtcagaatttttactgctaccagccaccaggtggccagtcagaagttgtgttacc < 2:612071‑M1/149‑117 (MQ=255) tcAGCCAGCACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctccaggtatagtcagaatttttactgctaccagccaccaggtggccagtcagaagttgtgttacccaat > 1:25249‑M1/1‑30 (MQ=255) cagccagcTCAATTCGGACCTGACGGCTAgaaaccagggtcattaccgaacgtttgttggcagcgacagccatgaaaacctccaggtatagtcagacgttttactgctaccagccaccaggtggccagtcagaagttgtgttacccaa < 1:724842‑M1/148‑120 (MQ=255) cagccagcACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctccaggtatagtcagaatttttactgctaccagccaccaggtggccagtcagaagttgtgttacccaata < 1:419454‑M1/150‑122 (MQ=255) cagccagcACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctccaggtatagtcagaatttttactgctaccagccaccaggtggccagtcagaagttgtgttacccaat < 1:1027030‑M1/149‑121 (MQ=255) gccagcACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctccaggtatagtcagaatttttactgctaccagccaccaggtggccagtcagaagttgtgttacccaataagg > 1:1088026‑M1/1‑27 (MQ=255) gccagcACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctccaggtatagtcagaatttttactgctaccagccaccaggtggccagtcagaagttgtgttacccaataagg < 2:564101‑M1/151‑125 (MQ=255) ccagcACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctccaggtatagtcagaatttttactgctaccagccaccaggtggccagtcagaagttgtgttacccaataagga < 1:780528‑M1/151‑126 (MQ=255) ccagcACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctccaggtatagtcagaatttttactgctaccagccaccaggtggccagtcagaagttgtgttacccaataagg > 2:1083804‑M1/1‑26 (MQ=255) gcACAATGCGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctccaggtatagtcagaatttttactgctaccagccaccaggtggccagtcagaagttgtgttacccaataaggaacg < 1:506261‑M1/151‑129 (MQ=255) cGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctccaggtatagtcagaatttttactgctaccagccaccaggtggccagtcagaagttgtgttacccaataaggaacgactctctt > 1:1196741‑M1/1‑15 (MQ=255) cGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctccaggtatagtcagaatttttactgctaccagccaccaggtggccagtcagaagttgtgttacccaataaggaacgactctctt < 2:1062522‑M1/151‑137 (MQ=255) cGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctccaggtatagtcagaatttttactgctaccagccaccaggtggccagtcagaagttgtgttacccaataaggaacgactctctt < 1:492861‑M1/151‑137 (MQ=255) cGGACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctccaggtatagtcagaatttttactgctaccagccaccaggtagccagtcagaagttgtgttccccaataaggaacgactctct < 2:1140757‑M1/150‑136 (MQ=255) ggACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctccaggtatagtcagaatttttactgctaccagccaccaggtggccagtcagaagttgtgttacccaataaggaacgactctcttt > 2:309800‑M1/1‑14 (MQ=255) gACCTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctccaggtatagtcagaatttttactgctaccagccaccaggtggccagtcagaagttgtgttacccaataaggaacgactctctttg > 1:865582‑M1/1‑13 (MQ=255) ccTGATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctccaggtatagtcagaatttttactgctaccagccaccaggtggccagtcagaagttgtgttacccaataaggaacgactctctttgtt < 2:26342‑M1/151‑141 (MQ=255) ccTGATGGCTAgaaaacagcgtcattaccgaacgtttgttagctgcgacagccatgaaaacctccaggtatcgtcagaatttttactgctaccagccaccaggtggccagtcagaagttgtgttaaacaataaggaacgactctctttgtt > 1:510564‑M1/1‑11 (MQ=255) gATGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctccaggtatagtcagaatttttactgctaccagccaccaggtggccagtcagaagttgtgttacccaataaggaacgactctctttgttcg > 1:1009957‑M1/1‑8 (MQ=255) aTGGCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctccaggtatagtcagaatttttactgctaccagccaccaggtggccagtcagaagttgtgttacccaataaggaacgactctctttgttcg > 1:329991‑M1/1‑7 (MQ=255) gCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctccaggtatagtcagaatttttactgctaccagccaccaggtggccagtcagaagttgtgttacccaataaggaacgactctctttgttcgaaaat > 1:53786‑M1/1‑4 (MQ=255) gCTAgaaaacagcgtcattaccgaacgtttgttggcagcgacagccatgaaaacctccaggtatagtcagaatttttactgctaccagccaccaggtggccagtcagaagttgtgttacccaataaggaacgactctctttgttcgaaaat < 1:1012978‑M1/151‑148 (MQ=255) | CACAGGGTCAGCTCACGATCCACCAGGGTCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTATAGATGTCAGTAGGACCGGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAATAAGGAACGA > NC_000913/3377212‑3377505 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |