| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,377,359 | Δ18 bp | coding (45‑62/639 nt) | sspA ← | stringent starvation protein A, phage P1 late gene activator, RNAP‑associated acid‑resistance protein, inactive glutathione S‑transferase homolog |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3377359 | 3377376 | 18 | 105 [0] | [0] 106 | sspA | stringent starvation protein A, phage P1 late gene activator, RNAP‑associated acid‑resistance protein, inactive glutathione S‑transferase homolog |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3377358 | 0 (0.000) | 105 (1.190) | 86/298 | 0.0 | 100% | coding (63/639 nt) | sspA | stringent starvation protein A, phage P1 late gene activator, RNAP‑associated acid‑resistance protein, inactive glutathione S‑transferase homolog |
| ? | NC_000913 | 3377377 = | 0 (0.000) | coding (44/639 nt) | sspA | stringent starvation protein A, phage P1 late gene activator, RNAP‑associated acid‑resistance protein, inactive glutathione S‑transferase homolog | |||||
Only 100 of 106 total aligned reads displayed.
TCCACCAGGGTCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTATAGATGTCAGTAGGACCGGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAATAAGGAACGACTCTCTTTGTTCGAAAATCAAA > NC_000913/3377230‑3377527 | cacagggtcagctcacgatccaccagggtcggaacgctctgattcgggttgaggtcaatcagatcctgaggcggattgtccttttccacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGaaa < 1:908934‑M2/4‑1 (MQ=255)cacagggtcagctcacgatccaccagggtcggaacgctctgattcgggttgaggtcaatcagatcctgaggcggattgtccttttccacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGaa > 2:1302655‑M2/148‑150 (MQ=255) acagggtcagctcacgatccaccagggtcggaacgctctgattcgggttgaggtcaatcagatcctgaggcggattgtccttttccacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGaaa > 2:795314‑M2/147‑150 (MQ=255) acagggtcagctcacgatccaccagggtcggaacgctctgattcgggttgaggtcaatcagatcctgaggcggattgtcctgttccacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGaaaa < 1:565073‑M2/5‑1 (MQ=255) agggtcagctcacgatccaccagggtcggaacgctctgattcgggttgaggtcaatcagatcctgaggcggattgtccttttccacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACa < 1:909848‑M2/7‑1 (MQ=255) ggtcagctcacgatccaccagggtcggaacgctctgattcgggttgaggtcaatcagatcctgaggcggattgtccttttccacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGc > 1:223966‑M2/143‑151 (MQ=255) tcagctcacgatccaccagggtcggaacgctctgattcgggttgaggtcaatcagatcctgaggcggattgtccttttccacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGt > 1:881692‑M2/141‑151 (MQ=255) tcagctcacgatccaccagggtcggaacgctctgattcgggttgaggtcaatcagatcctgaggcggattgtccttttccacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGt > 1:762141‑M2/141‑151 (MQ=255) cagctcacgatccaccagggtcggaacgctctgattcgggttgaggtcaatcagatcctgaggcggattgtccttttccacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTc < 1:794687‑M2/12‑1 (MQ=255) cagctcacgatccaccagggtcggaacgctctgattcgggttgaggtcaatcagatcctgaggcggattgtccttttccacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTc < 2:1347644‑M2/12‑1 (MQ=255) cagctcacgatccaccagggtcggaacgctctgattcgggttgaggtcaatcagatcctgaggcggattgtccttttccacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTc < 1:393085‑M2/12‑1 (MQ=255) agctcacgatccaccagggtcggaacgctctgattcgggttgaggtcaatcagatcctgaggcggattgtccttttccacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTc > 1:941792‑M2/139‑150 (MQ=255) agctcacgatccaccagggtcggaacgctctgattcgggttgaggtcaatcagatcctgaggcggattgtccttttccacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTc > 1:1179098‑M2/139‑150 (MQ=255) agctcacgatccaccagggtcggaacgctctgattcgggttgaggtcaatcagatcctgaggcggattgtccttttccacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCa < 1:717245‑M2/13‑1 (MQ=255) ctcacgatccaccagggtcggaacgctctgattcgggttgaggtcaatcagatcctgaggcggattgtccttttccacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCAtt > 2:592916‑M2/137‑151 (MQ=255) tcacgatccaccagggtcggaacgctctgattcgggttgaggtcaatcagatcctgaggcggattgtccttttccacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCAtt > 2:482094‑M2/136‑150 (MQ=255) cacgatccaccagggtcggaacgctctgattcgggttgaggtcaatcagatcctgaggcggattgtccttttccacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTAc > 2:295676‑M2/135‑151 (MQ=255) cacgatccaccagggtcggaacgctctgattcgggttgaggtcaatcagatcctgaggcggattgtccttttccacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTAc > 2:746752‑M2/135‑151 (MQ=255) cgatccaccagggtcggaacgctctgattcgggttgaggtcaatcagatcctgaggcggattgtccttttccacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCg < 1:1157160‑M2/19‑1 (MQ=255) atccaccagggtcggaacgctctgattcgggttgaggtcaatcagatcctgaggcggattgtccttttccacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGaa < 2:1145123‑M2/21‑1 (MQ=255) ccaccagggtcggaacgctctgattcgggttgaggtcaatcagatcctgaggcggattgtccttttccacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACg < 2:416435‑M2/23‑1 (MQ=255) ccagggtcggaacgctctgattcgggttgaggtcaatcagatcctgaggcggattgtccttttccacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGTAAACAGCGTCATTACCGAACGttt < 1:469297‑M2/26‑1 (MQ=255) cagggtcggaacgctctgattcgggttgaggtcaatcagatcctgaggcggattgtccttttccacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTttg < 1:507460‑M2/27‑1 (MQ=255) cagggtcggaacgctctgattcgggttgaggtcaatcagatcctgaggcggattgtccttttccacgtgttcgatctcgaaacgtacaccggtctcagccagcacaatgcggacctgagggctaGAAAACAGCGTCATTACCGAACGTttg < 1:220310‑M2/27‑1 (MQ=255) gggtcggaacgctctgattcgggttgaggtcaatcagatcctgaggcggattgtccttttccacgtgttcgatctcgaaacttacccctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTttgtt < 1:103835‑M2/29‑1 (MQ=255) ggtcggaacgctctgattcgggttgaggtcaatcagatcctgaggcggattgtccttttccacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCTTCATTACCGAACGTttgttg < 1:1188922‑M2/30‑1 (MQ=255) cggaacgctctgattcgggttgaggtcaatcagatcctgaggcggattgtccttttccacgggttcgatctcgaaacttactccattctcagccagcgcaatgcggacctgatggctaGAAAACGGCGTCATTACCGAACGTTTGTTGGCa < 1:476638‑M2/33‑1 (MQ=255) ggaacgctctgattctggttgacgtcaatcagagcctgaggcggattgtccttttccacgtgtgcgatcgcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTGTGTTGGCa < 1:1033819‑M2/33‑1 (MQ=255) gaacgctctgattcgggttgaggtcaatcagatcctgaggcggattgtccttttccacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGc > 2:92682‑M2/117‑151 (MQ=255) acgctctgattcgggttgaggtcaatcagatcctgaggcggattgtccttttccacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCg > 2:914241‑M2/115‑150 (MQ=255) gctctgattcgggttgaggtcaatcagatcctgaggcggattgtccttttccacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACa < 2:1314043‑M2/39‑1 (MQ=255) gattcgggttgaggtcaatcagatcctgaggcggattgtccttttccacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCa < 2:137104‑M2/43‑1 (MQ=255) gattcgggttgaggtcaatcagatcctgaggcggattgtccttttccacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCAt > 2:806962‑M2/108‑151 (MQ=255) attcgggttgaggtcaatcagatcctgaggcggattgtccttttccacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATg < 1:115832‑M2/45‑1 (MQ=255) cgggttgaggtcaatcagatcctgaggcggattgtccttttccacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGaaa < 2:117671‑M2/48‑1 (MQ=255) gggttgaggtcaatcagatcctgaggcggattgtccttttccacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctaatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGaaa > 1:332052‑M2/103‑150 (MQ=255) ggttgaggtcaatcagatcctgaggcggattgtccttttccacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAAc < 2:514256‑M2/50‑1 (MQ=255) gttgaggtcaatcagatcctgaggcggattgtccttttccacttgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAAcc > 2:781168‑M2/101‑151 (MQ=255) gttgaggtcaatcagatcctgaggcggattgtccttttccacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAAcc > 1:1284514‑M2/101‑151 (MQ=255) ttgaggtcaatcagatcctgaggcggattgtccttttccacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCt > 2:456506‑M2/100‑151 (MQ=255) gaggtcaatcagatcctgaggcggattgtccttttccacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTcc > 1:168102‑M2/98‑151 (MQ=255) gaggtcaatcagatcctgaggcggattgtccttttccacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTcc > 1:1305609‑M2/98‑151 (MQ=255) gaggtcaatcagatcctgaggcggattgtccttttccacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTc < 2:330163‑M2/53‑1 (MQ=255) ggtcaatcagatcctgaggcggattgtccttttccacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAg < 1:843492‑M2/56‑1 (MQ=255) tcaatcagatcctgaggcggattgtccttttccacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAg > 1:843677‑M2/94‑149 (MQ=255) tcaatcagatcctgaggcggattgtccttttccacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGt > 2:245828‑M2/94‑151 (MQ=255) tcagatcctgaggcggattgtccttttccacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGtat > 1:1126693‑M2/90‑149 (MQ=255) cagatcctgaggcggattgtccttttccacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGt > 2:18617‑M2/89‑151 (MQ=255) agatcctgaggcggattgtccttttccacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTc > 2:932205‑M2/88‑151 (MQ=255) cctgaggcggattgtccttttccacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGa > 2:866902‑M2/84‑150 (MQ=255) ctgaggcggattgtccttttccacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAAt > 1:236993‑M2/83‑151 (MQ=255) gaggcggattgtccttttccacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAAttt > 2:1262237‑M2/81‑151 (MQ=255) gaggcggattgtccttttccacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAAtt < 1:148401‑M2/70‑1 (MQ=255) gaggcggattgtccttttccacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAAt < 2:167848‑M2/69‑1 (MQ=255) gattgtccttttccacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTg < 2:935376‑M2/77‑1 (MQ=255) ttgtccttttccacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCt > 2:1260538‑M2/73‑151 (MQ=255) ttgtccttttccacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATCTTTACTGCt > 2:1040901‑M2/73‑151 (MQ=255) ccttttccacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTAcc > 1:405666‑M2/69‑150 (MQ=255) ccttttccacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTAcc > 2:504189‑M2/69‑150 (MQ=255) tttccacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGcc > 2:206943‑M2/66‑151 (MQ=255) cacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGccacc > 1:1355411‑M2/62‑150 (MQ=255) cacgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGccacc > 2:428299‑M2/62‑150 (MQ=255) acgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGccacc > 2:63530‑M2/61‑149 (MQ=255) acgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTATTACTGCTACCAGccacc > 2:480803‑M2/61‑149 (MQ=255) cgtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAg < 1:986201‑M2/91‑1 (MQ=255) gtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGt < 1:638314‑M2/93‑1 (MQ=255) gtgttcgatctcgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGt > 1:593361‑M2/59‑151 (MQ=255) cgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCa < 1:369617‑M2/98‑1 (MQ=255) cgaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCa < 2:786277‑M2/102‑1 (MQ=255) gaaacttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCa < 1:848225‑M2/102‑1 (MQ=255) acttacacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGtt < 2:387002‑M2/108‑1 (MQ=255) tacacctttctcagccagcacaatgcggaactgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTtgtg > 1:53268‑M2/41‑151 (MQ=255) acacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTgtgt > 2:322724‑M2/40‑151 (MQ=255) acacctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTgtgt > 2:419574‑M2/40‑151 (MQ=255) acctttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGtt > 1:802230‑M2/38‑150 (MQ=255) ttctcagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTAcc < 2:612071‑M2/116‑1 (MQ=255) tcagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAAt > 1:25249‑M2/31‑150 (MQ=255) cagccagctcaattcggacctgacggctaGAAACCAGGGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGACGTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCaa < 1:724842‑M2/119‑1 (MQ=255) cagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAAt < 1:1027030‑M2/120‑1 (MQ=255) cagccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAATa < 1:419454‑M2/121‑1 (MQ=255) gccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAATAAgg > 1:1088026‑M2/28‑151 (MQ=255) gccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAATAAgg < 2:564101‑M2/124‑1 (MQ=255) ccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAATAAgg > 2:1083804‑M2/27‑150 (MQ=255) ccagcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAATAAGGa < 1:780528‑M2/125‑1 (MQ=255) agcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAATAAGGAAc < 1:643400‑M2/127‑1 (MQ=255) gcacaatgcggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAATAAGGAACg < 1:506261‑M2/128‑1 (MQ=255) cggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAATAAGGAACGACTCTCtt < 1:492861‑M2/136‑1 (MQ=255) cggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAATAAGGAACGACTCTCtt > 1:1196741‑M2/16‑151 (MQ=255) cggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAATAAGGAACGACTCTCtt < 2:1062522‑M2/136‑1 (MQ=255) cggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTAGCCAGTCAGAAGTTGTGTTCCCCAATAAGGAACGActctct < 2:1140757‑M2/135‑1 (MQ=255) ggacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAATAAGGAACGACTCTCttt > 2:309800‑M2/15‑151 (MQ=255) gacctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAATAAGGAACGACTCTCTTTg > 1:865582‑M2/14‑151 (MQ=255) cctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAATAAGGAACGACTCTCTTTGtt < 2:26342‑M2/140‑1 (MQ=255) cctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTAGCTGCGACAGCCATGAAAACCTCCAGGTATCGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTAAACAATAAGGAACGACTCTCTTTGtt > 1:510564‑M2/12‑151 (MQ=255) ctgatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAATAAGGAACGACTCTCTTTGtt > 1:235159‑M2/11‑150 (MQ=255) gatggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAATAAGGAACGACTCTCTTTGTTCg > 1:1009957‑M2/9‑150 (MQ=255) atggctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAATAAGGAACGACTCTCTTTGTTCg > 1:329991‑M2/8‑149 (MQ=255) gctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAATAAGGAACGACTCTCTTTGTTCGAAAAt > 1:53786‑M2/5‑151 (MQ=255) gctaGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAATAAGGAACGACTCTCTTTGTTCGAAAAt < 1:1012978‑M2/147‑1 (MQ=255) gAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAATAAGGAACGACTCTCTTTGTTCGAAAATcaaa < 1:901448/151‑1 (MQ=255) | TCCACCAGGGTCGGAACGCTCTGATTCGGGTTGAGGTCAATCAGATCCTGAGGCGGATTGTCCTTTTCCACGTGTTCGATCTCGAAACTTACACCTTTCTCAGCCAGCACAATGCGGACCTGATGGCTATAGATGTCAGTAGGACCGGAAAACAGCGTCATTACCGAACGTTTGTTGGCAGCGACAGCCATGAAAACCTCCAGGTATAGTCAGAATTTTTACTGCTACCAGCCACCAGGTGGCCAGTCAGAAGTTGTGTTACCCAATAAGGAACGACTCTCTTTGTTCGAAAATCAAA > NC_000913/3377230‑3377527 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |