Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 657,215 Δ25 bp intergenic (+98/‑53) pagP → / → cspE phospholipid:lipid A palmitoyltransferase/constitutive cold shock family transcription antitermination protein; negative regulator of cspA transcription; RNA melting protein; ssDNA‑binding protein

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 657215 657239 25 64 [0] [0] 63 pagP/cspE phospholipid:lipid A palmitoyltransferase/constitutive cold shock family transcription antitermination protein; negative regulator of cspA transcription; RNA melting protein; ssDNA‑binding protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 6572140 (0.000)62 (0.980) 55/296 0.3 100% intergenic (+97/‑78) pagP/cspE phospholipid:lipid A palmitoyltransferase/constitutive cold shock family transcription antitermination protein; negative regulator of cspA transcription; RNA melting protein; ssDNA‑binding protein
?NC_000913 657240 = 0 (0.000)intergenic (+123/‑52) pagP/cspE phospholipid:lipid A palmitoyltransferase/constitutive cold shock family transcription antitermination protein; negative regulator of cspA transcription; RNA melting protein; ssDNA‑binding protein

GGTACCTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGACAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTGGACAAAGCGTACCACAATTGGTGTACTGGTAACCGACACAGCATTTGTGTCTATTTTTCATGTAAAGGTAATTTTGATGTCTAAGATTAAAGGTAACGTTAAGTGGTTTAATGAGTCCAAAGGATTCGGTTTCATTACTCCGGAAGACG  >  NC_000913/657064‑657364
                                                                                                                                                      |                                                                                                                                                      
ggTACCTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGACAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACT                                                                                                                                                        <  2:697827‑M1/151‑1 (MQ=255)
 gTACCTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGACAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTa                                                                                                                                                       <  2:56858‑M1/151‑2 (MQ=255)
   aCCTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGACAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTact                                                                                                                                                     >  1:322649‑M1/1‑148 (MQ=255)
     cTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGACAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTactgg                                                                                                                                                   >  1:959893‑M1/1‑146 (MQ=255)
               ggCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGACAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTactggtaaccgaca                                                                                                                                          <  1:434208‑M1/150‑15 (MQ=255)
                 cAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGACAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTactggtaaccgacacag                                                                                                                                       <  1:691382‑M1/151‑18 (MQ=255)
                    tgtgTACTTTGCCTGGATGCGCTTTCAGTTTTGAGACAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTactggtaaccgacacagcat                                                                                                                                    >  2:275217‑M1/1‑131 (MQ=255)
                         aCTTTGCCTGGATGCGCTTTCAGTTTTGAGACAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTactggtaaccgacacagcatttgtg                                                                                                                               <  2:757481‑M1/151‑26 (MQ=255)
                          cTTTGCCTGGATGCGCTTTCAGTTTTGAGACAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTactggtaaccgacacagcatttgtgt                                                                                                                              >  2:674825‑M1/1‑125 (MQ=255)
                             tGCCTGGATGCGCTTTCAGTTTTGAGACAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTactggtaaccgacacagcatttgtgtct                                                                                                                            >  2:119505‑M1/1‑122 (MQ=255)
                                cTGGATGCGCTTTCAGTTTTGAGACAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTactggtaaccgacacagcatttgtgtctattt                                                                                                                        >  2:550138‑M1/1‑119 (MQ=255)
                                 tGGATGCGCTTTCAGTTTTGAGACAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTactggtaaccgacacagcatttgtgtctatttt                                                                                                                       >  1:453753‑M1/1‑118 (MQ=255)
                                  ggATGCGCTTTCAGTTTTGAGACAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTactggtaaccgacacagcatttgtgtctattttt                                                                                                                      >  2:358828‑M1/1‑117 (MQ=255)
                                       cgcTTTCAGTTTTGAGACAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTactggtaaccgacacagcatttgtgtctatttttcatgt                                                                                                                 <  2:187435‑M1/151‑40 (MQ=255)
                                       cgcTTTCAGTTTTGAGACAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTactggtaaccgacacagcatttgtgtctatttttcatgt                                                                                                                 <  2:344643‑M1/151‑40 (MQ=255)
                                       cgcTTTCAGTTTTGAGACAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTactggtaaccgacacagcatttgtgtctatttttcatgt                                                                                                                 >  1:454561‑M1/1‑112 (MQ=255)
                                           ttCAGTTTTGAGACAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTactggtaaccgacacagcatttgtgtctatttttcatgtaaa                                                                                                              <  1:383521‑M1/150‑43 (MQ=255)
                                            tCAGTTTTGAGACAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTactggtaaccgacacagcatttgtgtctatttttcatgtaaag                                                                                                             <  1:540155‑M1/150‑44 (MQ=255)
                                             cAGTTTTGAGACAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTactggtaaccgacacagcatttgtgtctatttttcatgtaaaggt                                                                                                           >  2:584813‑M1/1‑106 (MQ=255)
                                                ttttGAGACAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTactggtaaccgacacagcatttgtgtctatttttcatgtaaaggtaat                                                                                                        >  2:857572‑M1/1‑103 (MQ=255)
                                                  ttGAGACAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTactggtaaccgacacagcatttgtgtctatttttcatgtaaaggtaattt                                                                                                      >  1:412211‑M1/1‑101 (MQ=255)
                                                  ttGAGACAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTactggtaaccgacacagcatttgtgtctatttttcatgtaaaggtaattt                                                                                                      >  2:505608‑M1/1‑101 (MQ=255)
                                                   tGAGACAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTactggtaaccgacacagcatttgtgtctatttttcatgtaaaggtaattt                                                                                                      <  1:673433‑M1/150‑51 (MQ=255)
                                                     agaCAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTactggtaaccgacacagcatttgtgtctatttttcatgtaaaggtaattttg                                                                                                    >  1:644115‑M1/1‑98 (MQ=255)
                                                        cAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTactggtaaccgacacagcatttgtgtctatttttcatgtaaaggtaattttgatgt                                                                                                >  1:961520‑M1/1‑95 (MQ=255)
                                                                 ttttAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTactggtaaccgacacagcatttgtgtctatttttcatgtaaaggtaattttgatgtctaagatt                                                                                        >  1:634328‑M1/1‑86 (MQ=255)
                                                                   ttAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTactggaaaccgacacagcatttgtgtctatttttcatgtaaaggtaattttgatgtctaagattaa                                                                                      >  2:106702‑M1/1‑84 (MQ=255)
                                                                               ttAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTactggtaaccgacacagcatttgtgtctatttttcatgtaaaggtaattttgatgtctaagattaaaggtaacgttaa                                                                          <  2:745424‑M1/150‑79 (MQ=255)
                                                                                tAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTactggtaaccgacacagcatttgtgtctatttttcatgtaaaggtaattttgatgtctaagattaaaggtaacgttaagt                                                                        >  2:561506‑M1/1‑71 (MQ=255)
                                                                                 aaaaTCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTactggtaaccgacacagcatttgtgtctatttttcatgtaaaggtaattttgatgtctaagattaaaggtaacgttaagtg                                                                       >  1:954689‑M1/1‑70 (MQ=255)
                                                                                 aaaaTCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTactggtaaccgacacagcatttgtgtctatttttcatgtaaaggtaattttgatgtctaagattaaaggtaacgttaagtg                                                                       >  1:316065‑M1/1‑70 (MQ=255)
                                                                                     tCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTactggtaaccgacacagcatttgtgtctatttttcatgtaaaggtaattttgatgtctaagattaaaggtaacgttaagtggttt                                                                   >  1:446561‑M1/1‑66 (MQ=255)
                                                                                       aaTAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTactggtaaccgacacagcatttgtgtctatttttcatgtaaaggtaattttgatgtctaagattaaaggtaacgttaagtggtttaa                                                                 <  2:679311‑M1/151‑88 (MQ=255)
                                                                                        aTAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTactggtaaccgacacagcatttgtgtctatttttcatgtaaaggtaattttgatgtctaagattaaaggtaacgttaagtggtttaat                                                                >  2:948384‑M1/1‑63 (MQ=255)
                                                                                        aTAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTactggtaaccgacacagcatttgtgtctatttttcatgtaaaggtaattttgatgtctaagattaaaggtaacgttaagtggtttaat                                                                <  1:316850‑M1/151‑89 (MQ=255)
                                                                                         tAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTactggtaaccgacacagcatttgtgtctatttttcatgtaaaggtaattttgatgtctaagattaaaggtaacgttaagtggtttaatg                                                               >  1:90736‑M1/1‑62 (MQ=255)
                                                                                          aGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTactggtaaccgacacagcatttgtgtctatttttcatgtaaaggtaattttgatgtctaagattaaaggtaacgttaagtggtttaatga                                                              <  1:4801‑M1/151‑91 (MQ=255)
                                                                                          aGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTactggtaaccgacacagcatttgtgtctatttttcatgtaaaggtaattttgatgtctaagattaaaggtaacgttaagtggtttaatga                                                              <  2:708199‑M1/151‑91 (MQ=255)
                                                                                          aGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTactggtaaccgacacagcatttgtgtctatttttcatgtaaaggtaattttgatgtctaagattaaaggtaacgttaagtggtttaatg                                                               >  1:519232‑M1/1‑61 (MQ=255)
                                                                                                 aTAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTactggtaaccgacacagcatttgtgtctatttttcatgtaaaggtaattttgatgtctaagattaaaggtaacgttaagtggtttaatgagtccaaa                                                       <  1:584698‑M1/151‑98 (MQ=255)
                                                                                                       aaCATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTactggtaaccgacacagcatttgtgtctatttttcatgtaaaggtaattttgatgtctaagattaaaggtaacgttaagtggtttaatgagtccaaaggattc                                                 <  2:412302‑M1/151‑104 (MQ=255)
                                                                                                        aCATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTactggtaaccgacacagcatttgtgtctatttttcatgtaaaggtaattttgatgtctaagattaaaggtaacgttaagtggtttaatgagtccaaaggattcg                                                <  2:130952‑M1/151‑105 (MQ=255)
                                                                                                           tCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTactggtaaccgacacagcatttgtgtctatttttcatgtaaaggtaattttgatgtctaagattaaaggtaacgttaagtggtttaatgagtccaaaggattcggtt                                             >  1:833465‑M1/1‑44 (MQ=255)
                                                                                                             aaaaaTAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTactggtaaccgacacagcatttgtgtctatttttcatgtaaaggtaattttgatgtctaagattaaaggtaacgttaagtggtttaatgagtccaaaggattcggtttc                                           >  2:388693‑M1/1‑42 (MQ=255)
                                                                                                                  tAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTactggtaaccgacacagcatttgtgtctatttttcatgtaaaggtaattttgatgtctaagattaaaggtaacgttaagtggtttaatgagtccaaaggattcggtttcattac                                      >  1:391993‑M1/1‑37 (MQ=255)
                                                                                                                   aaCGCGACTTTTATCACTTTTTAGTAAAGTTACACTactggtaaccgacacagcatttgtgtctatttttcatgtaaaggtaattttgatgtctaagattaaaggtaacgttaagtggtttaatgagtccaaaggattcggtttcattact                                     >  1:774268‑M1/1‑36 (MQ=255)
                                                                                                                   aaCGCGACTTTTATCACTTTTTAGTAAAGTTACACTactggtaaccgacacagcatttgtgtctatttttcatgtaaaggtaattttgatgtctaagattaaaggtaacgttaagtggtttaatgagtccaaaggattcggtttcattac                                      <  1:738350‑M1/150‑115 (MQ=255)
                                                                                                                      gcgACTTTTATCACTTTTTAGTAAAGTTACACTactggtaaccgacacagcatttgtgtctatttttcatgtaaaggtaattttgatgtctaagattaaaggtaacgttaagtggtttaatgagtccaaaggattcggtttcattactccg                                  <  1:705641‑M1/151‑119 (MQ=255)
                                                                                                                           ttttATCACTTTTTAGTAAAGTTACACTactggtaaccgacacagcatttgtgtctatttttcatgtaaaggtaattttgatgtctaagattaaaggtaacgttaagtggtttaatgagtccaaaggattcggtttcattactccgga                                >  2:473102‑M1/1‑28 (MQ=255)
                                                                                                                             ttATCACTTTTTAGTAAAGTTACACTactggtaaccgacacagcatttgtgtctatttttcatgtaaaggtaattttgatgtctaagattaaaggtaacgttaagtggtttaatgagtccaaaggattcggtttcattactccggaagacg                           >  2:941798‑M1/1‑26 (MQ=255)
                                                                                                                             ttATCACTTTTTAGTAAAGTTACACTactggtaaccgacacagcatttgtgtctatttttcatgtaaaggtaattttgatgtctaagattaaaggtaacgttaagtggtttaatgagtccaaaggattcggtttcattactccggaagac                            <  1:134908‑M1/150‑125 (MQ=255)
                                                                                                                              tATCACTTTTTAGTAAAGTTACACTactggtaaccgacacagcatttgtgtctatttttcatgtaaaggtaattttgatgtctaagattaaaggtaacgttaagtggtttaatgagtccaaaggattcggtttcattactccggaagacg                           <  1:967630‑M1/150‑126 (MQ=255)
                                                                                                                              tATCACTTTTTAGTAAAGTTACACTactggtaaccgacacagcatttgtgtctatttttcatgtaaaggtaattttgatgtctaagattaaaggtaacgttaagtggtttaatgagtccaaaggattcggtttcattactccggaagacg                           <  2:519342‑M1/150‑126 (MQ=255)
                                                                                                                                 cACTTTTTAGTAAAGTTACACTactggtaaccgacacagcatttgtgtctatttttcatgtaaaggtaattttgatgtctaagattaaaggtaacgttaagtggtttaatgagtccaaaggattcggtttcattactccggaagacggcag                       <  1:170346‑M1/151‑130 (MQ=255)
                                                                                                                                 cACTTTTTAGTAAAGTTACACTactggtaaccgacacagcatttgtgtctatttttcatgtaaaggtaattttgatgtctaagattaaaggtaacgttaagtggtttaatgagtccaaaggattcggtttcattactccggaagacggc                         >  2:727288‑M1/1‑22 (MQ=255)
                                                                                                                                 cACTTTTTAGTAAAGTTACACTactggtaaccgacacagcatttgtgtctatttttcatgtaaaggtaattttgatgtctaagattaaaggtaacgttaagtggtttaatgagtccaaaggattcggtttcattactccggaagacggc                         >  1:173920‑M1/1‑22 (MQ=255)
                                                                                                                                   cTTTTTAGTAAAGTTACACTactggtaaccgacacagcatttgtgtctatttttcatgtaaaggtaattttgatgtctaagattaaaggtaacgttaagtggtttaatgagtccaaaggattcggtttcattactccggaagacggcagc                      <  1:721591‑M1/150‑131 (MQ=255)
                                                                                                                                         aGTAAAGTTACACTactggtaaccgacacagcatttgtgtctatttttcatgtaaaggtaattttgatgtctaagattaaaggtaacgttaagtggtttaatgagtccaaaggattcggtttcattactccggaagacggcagcaaagac                <  2:860604‑M1/150‑137 (MQ=255)
                                                                                                                                             aaGTTACACTactggtaaccgacacagcatttgtgtctatttttcatgtaaaggtaattttgatgtctaagattaaaggtaacgttaagtggtttaatgagtccaaaggattcggtttcattactccggaagacggcagcaaagacgtgtt           >  1:695053‑M1/1‑10 (MQ=255)
                                                                                                                                             aaGTTACACTactggtaaccgacacagcatttgtgtctatttttcatgtaaaggtaattttgatgtctaagattaaaggtaacgttaagtggtttaatgagtccaaaggattcggtttcattactccggaagacggcagcaaagacgtgtt           >  2:373858‑M1/1‑10 (MQ=255)
                                                                                                                                              aGTTACACTactggtaaccgacacagcatttgtgtctatttttcatgtaaaggtaattttgatgtctaagattaaaggtaacgttaagtggtttaatgagtccaaaggattcggtttcattactccggaagacggcagcaaagacgtgttc          <  2:551876‑M1/151‑143 (MQ=255)
                                                                                                                                                  acacTactggtaaccgacacagcatttgtgtctatttttcatgtaaaggtaattttgatgtctaagattaaaggtaacgttaagtggtttaatgagtccaaaggattcggtttcattactccggaagacggcagcaaagacgtgttcgta       <  1:977033‑M1/150‑146 (MQ=255)
                                                                                                                                                   cacTactggtaaccgacacagcatttgtgtctatttttcatgtaaaggtaattttgatgtctaagattaaaggtaacgttaagtggtttaatgagtccaaaggattcggtttcattactccggaagacggcagcaaagacgtgttcgtac      <  1:867751‑M1/150‑147 (MQ=255)
                                                                                                                                                      tactggtaaccgacacagcatttgtgtctatttttcatgtaaaggtaattttgatgtctaagattaaaggtaacgttaagtggtttaatgagtccaaaggattcggtttcattactccggaagacggcagcaaagacgtgttcgtacactt  >  1:899510‑M1/1‑1 (MQ=255)
                                                                                                                                                      |                                                                                                                                                      
GGTACCTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGAGACAAATGAAGTTTTAGTAACTTCTTTAAAATCAATAGCTAAAATAAGTAACATCAAAAATAACGCGACTTTTATCACTTTTTAGTAAAGTTACACTGGACAAAGCGTACCACAATTGGTGTACTGGTAACCGACACAGCATTTGTGTCTATTTTTCATGTAAAGGTAATTTTGATGTCTAAGATTAAAGGTAACGTTAAGTGGTTTAATGAGTCCAAAGGATTCGGTTTCATTACTCCGGAAGACG  >  NC_000913/657064‑657364

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: