Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 2,810,987 IS1 (–) +9 bp coding (218‑226/531 nt) mprA → transcriptional repressor of microcin B17 synthesis and multidrug efflux

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2810987 =0 (0.000)89 (1.220) 76/296 0.0 100% coding (218/531 nt) mprA transcriptional repressor of microcin B17 synthesis and multidrug efflux
?NC_000913 3583428 = NA (NA)noncoding (1/768 nt) IS1 repeat region
* ? NC_000913 = 28109950 (0.000)79 (1.080) 67/298 0.1 100% coding (226/531 nt) mprA transcriptional repressor of microcin B17 synthesis and multidrug efflux
?NC_000913 = 3584195 NA (NA)noncoding (768/768 nt) IS1 repeat region

Only 100 of 171 total aligned reads displayed.

CTTATCAGGAGATCCTTCTGACTCGTCTTTGCATGCACATGCAAAGCAAGCTGCTGGAGAACCGCAATAAAATGCTGAAGGCTCAGGGGATTAACGAGACGTTGTTTATGGCGTTGATTACGCTGGAGTCTCAGGAAAACCACAGTATTCAGCCTTCTGAATTAAGTTGTGCTCTTGGATCATCCCGTACCAACGCGACGCGTATTGCCGATGAACTGGAAAAACGCGGTTGGATCGAACGTCGTGAAAGCGATAACGATCGCCGCTGCCTGCATCTGCAATTAACGGAAAAAGGTCACGA  >  NC_000913/2810837‑2811137
                                                                                                                                                      |                                                                                                                                                      
cagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacca                                                                                                                                                        >  2:485177‑M1/151‑151 (MQ=255)
cagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacca                                                                                                                                                        >  2:159268‑M1/151‑151 (MQ=255)
     cAGGAGATCCTTCTGACTCGTCTTTGCATGCACATGCAAAGCAAGCTGCTGGAGAACCGCAATAAAATGCTGAAGGCTCAGGGGATTAACGAGACGTTGTTTATGGCGTTGATTACGCTGGAGTCTCAGGAAAACCACAGTATTCAGCCtt                                                                                                                                                   >  1:115422/1‑151 (MQ=255)
      aGGAGATCCTTCTGACTCGTCTTTGCATGCACATGCAAAGCAAGCTGCTGGAGAACCGCAATAAAATGCTGAAGGCTCAGGGGATTAACGAGACGTTGTTTATGGCGTTGATTACGCTGGAGTCTCAGGAAAACCACAGTATTCAGCCTTc                                                                                                                                                  <  1:691898/151‑1 (MQ=255)
       ggAGATCCTTCTGACTCGTCTTTGCATGCACATGCAAAGCAAGCTGCTGGAGAACCGCAATAAAATGCTGAAGGCTCAGGGGATTAACGAGACGTTGTTTATGGCGTTGATTACGCTGGAGTCTCAGGAAAACCACAGTATTCAGCCTTCt                                                                                                                                                 <  2:342300/151‑1 (MQ=255)
             ccTTCTGACTCGTCTTTGCATGCACATGCAAAGCAAGCTGCTGGAGAACCGCAATAAAATGCTGAAGGCTCAGGGGATTAACGAGACGTTGTTTATGGCGTTGATTACGCTGGAGTCTCAGGAAAACCACAGTATTCAGCCTTCTGggtaa                                                                                                                                           <  2:59065‑M1/151‑6 (MQ=255)
              atgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAGCCTTCTGAATTaa                                                                                                                                          >  2:255543‑M1/137‑151 (MQ=255)
               ttCTGACTCGTCTTTGCATGCACATGCAAAGCAAGCTGCTGGAGAACCGCAATAAAATGCTGAAGGCTCAGGGGATTAACGAGACGTTGTTTATGGCGTTGATTACGCTGGAGTCTCAGGAAAACCACAGTATTCAGCCTTCTGggtaatg                                                                                                                                         >  2:109431‑M1/1‑144 (MQ=255)
               tgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAGCCTTCTGAATTa                                                                                                                                           <  1:224555‑M1/14‑1 (MQ=255)
                tCTGACTCGTCTTTGCATGCACATGCAAAGCAAGCTGCTGGAGAACCGCAATAAAATGCTGAAGGCTCAGGGGATTAACGAGACGTTGTTTATGGCGTTGATTACGCTGGAGTCTCAGGAAAACCACAGTATTCAGCCTTCTGggtaatg                                                                                                                                         >  2:957373‑M1/1‑143 (MQ=255)
                tCTGACTCGTCTTTGCATGCACATGCAAAGCAAGCTGCTGGAGAACCGCAATAAAATGCTGAAGGCTCAGGGGATTAACGAGACGTTGTTTATGGCGTTGATTACGCTGGAGTCTCAGGAAAACCACAGTATTCAGCCTTCTGggtaat                                                                                                                                          <  1:166602‑M1/149‑7 (MQ=255)
                gtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAGCCTTCTGAATTAAg                                                                                                                                         >  2:968100‑M1/135‑150 (MQ=255)
                gtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAGCCTTCTGAATTAAg                                                                                                                                         >  1:462696‑M1/135‑150 (MQ=255)
                gtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAGCCTTCTGAATTAAGt                                                                                                                                        >  2:993247‑M1/135‑151 (MQ=255)
                  ccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAGCCTTCTGAATTAAGTtg                                                                                                                                      <  2:1128995‑M1/19‑1 (MQ=255)
                   cggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAGCCTTCTGAATTAAGTtgt                                                                                                                                     >  2:1151292‑M1/132‑151 (MQ=255)
                    ggcggtgcttttgccgttacgcacccccccgtcagaagcggaacaggagggacagctcatagaaacagaagccactggagcacctcacaaactccatcatacactaaatcagtaagttggcagcatcaccAGCCTTCTGAATTAATTtgtg                                                                                                                                    >  1:548848‑M1/131‑151 (MQ=255)
                       cGTCTTTGCATGCACATGCAAAGCAAGCTGCTGGAGAACCGCAATAAAATGCTGAAGGCTCAGGGGATTAACGAGACGTTGTTTATGGCGTTGATTACGCTGGAGTCTCAGGAAAACCACAGTATTCAGCCTTCTGggtaatgactcca                                                                                                                                   <  1:280630‑M1/149‑14 (MQ=255)
                             tttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAGCCTTCTGAATTAAGTTGTGCTCTTGGat                                                                                                                           <  1:4971‑M1/30‑1 (MQ=255)
                              ttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAGCCTTCTGAATTAAGTTGTGCTCTTGGat                                                                                                                           >  2:789565‑M1/121‑150 (MQ=255)
                                      acgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAGCCTTCTGAATTAAGTTGTGCTCTTGGATCATCCCGTa                                                                                                                  >  1:344261‑M1/113‑151 (MQ=255)
                                       tgcaAAGCAAGCTGCTGGAGAACCGCAATAAAATGCTGAAGGCTCAGGGGATTAACGAGACGTTGTTTATGGCGTTGATTACGCTGGAGTCTCAGGAAAACCACAGTATTCAGCCTTCTGggtaatgactccaacttattgatagtgtttt                                                                                                                 >  2:1125726‑M1/1‑120 (MQ=255)
                                       tgcaAAGCAAGCTGCTGGAGAACCGCAATAAAATGCTGAAGGCTCAGGGGATTAACGAGACGTTGTTTATGGCGTTGATTACGCTGGAGTCTCAGGAAAACCACAGTATTCAGCCTTCTGggtaatgactccaacttattgatagtgtttt                                                                                                                 >  2:861145‑M1/1‑120 (MQ=255)
                                         caccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAGCCTTCTGAATTAAGTTGTGCTCTTGGATCATCCCGTACCa                                                                                                               >  2:964380‑M1/110‑151 (MQ=255)
                                              caagcTGCTGGAGAACCGCAATAAAATGCTGAAGGCTCAGGGGATTAACGAGACGTTGTTTATGGCGTTGATTACGCTGGAGTCTCAGGAAAACCACAGTATTCAGCCTTCTGggtaatgactccaacttattgatagtgttttatgttca                                                                                                          <  2:637592‑M1/151‑39 (MQ=255)
                                                agcTGCTGGAGAACCGCAATAAAATGCTGAAGGCTCAGGGGATTAACGAGACGTTGTTTATGGCGTTGATTACGCTGGAGTCTCAGGAAAACCACAGTATTCAGCCTTCTGtgtaatgactccaacttattgatagtgttttatgttcaga                                                                                                        <  1:1016187‑M1/151‑41 (MQ=255)
                                                  ctgctgGAGAACCGCAATAAAATGCTGAAGGCTCAGGGGATTAACGAGACGTTGTTTATGGCGTTGATTACGCTGGAGTCTCAGGAAAACCACAGTATTCAGCCTTCTGggtaatgactccaacttattgatagtgttttatgttcagat                                                                                                       <  1:800755‑M1/150‑42 (MQ=255)
                                                    gctgGAGAACCGCAATAAAATGCTGAAGGCTCAGGGGATTAACGAGACGTTGTTTATGGCGTTGATTACGCTGGAGTCTCAGGAAAACCACAGTATTCAGCCTTCTGggtaatgactccaacttattgatagtgttttatgttcagataat                                                                                                    >  2:130075‑M1/1‑107 (MQ=255)
                                                      tgGAGAACCGCAATAAAATGCTGAAGGCTCAGGGGATTAACGAGACGTTGTTTATGGCGTTGATTACGCTGGAGTCTCAGGAAAACCACAGTATTCAGCCTTCTGggtaatgactccaacttattgatagtgttttatgttcagataatgc                                                                                                  >  2:8222‑M1/1‑105 (MQ=255)
                                                       ggAGAACCGCAATAAAATGCTGAAGGCTCAGGGGATTAACGAGACGTTGTTTATGGCGTTGATTACGCTGGAGTCTCAGGAAAACCACAGTATTCAGCGTTCTGggtaatgactccaacttattgatagtgttttatgttcagataatg                                                                                                   <  1:1089580‑M1/149‑46 (MQ=255)
                                                        gagaACCGCAATAAAATGCTGAAGGCTCAGGGGATTAACGAGACGTTGTTTATGGCGTTGATTACGCTGGAGTCTCAGGAAAACCACAGTATTCAGCCTTCTGggtaatgactccaacttattgatagtgttttatgttcagataatgccc                                                                                                <  1:460256‑M1/151‑49 (MQ=255)
                                                        agctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAGCCTTCTGAATTAAGTTGTGCTCTTGGATCATCCCGTACCAACGCGACGCGTAtt                                                                                                 >  2:62105‑M1/95‑150 (MQ=255)
                                                            gaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAGCCTTCTGAATTAAGTTGTGCTCTTGGATCATCCCGTACCAACGCGACGCGTATTGCCg                                                                                             <  2:924448‑M1/60‑1 (MQ=255)
                                                            aCCGCAATAAAATGCTGAAGGCTCAGGGGATTAACGAGACGTTGTTTATGGCGTTGATTACGCTGGAGTCTCAGGAAAACCACAGTATTCAGCCTTCTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatg                                                                                            <  1:91712‑M1/151‑53 (MQ=255)
                                                              acaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAGCCTTCTGAATTAAGTTGTGCTCTTGGATCATCCCGTACCAACGCGACGCGTATTGCCGATg                                                                                          <  2:808869‑M1/63‑1 (MQ=255)
                                                                cAATAAAATGCTGAAGGCTCAGGGGATTAACGAGACGTTGTTTATGGCGTTGATTACGCTGGAGTCTCAGGAAAACCACAGTATTCAGCCTTCTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgact                                                                                         <  1:238148‑M1/150‑56 (MQ=255)
                                                                 aaTAAAATGCTGAAGGCTCAGGGGATTAACGAGACGTTGTTTATGGCGTTGATTACGCTGGAGTCTCAGGAAAACCACAGTATTCAGCCTTCTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgacttt                                                                                       <  2:1113771‑M1/151‑58 (MQ=255)
                                                                    gggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAGCCTTCTGAATTAAGTTGTGCTCTTGGATCATCCCGTACCAACGCGACGCGTATTGCCGATGAACTgg                                                                                    >  2:891924‑M1/83‑151 (MQ=255)
                                                                    gggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAGCCTTCTGAATTAAGTTGTGCTCTTGGATCATCCCGTACCAACGCGACGCGTATTGCCGATGAACTgg                                                                                    >  2:666678‑M1/83‑151 (MQ=255)
                                                                     ggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAGCCTTCTGAATTAAGTTGTGCTCTTGGATCATCCCGTACCAACGCGACGCGTATTGCCGATGAACTGGa                                                                                   >  1:646691‑M1/82‑151 (MQ=255)
                                                                      gacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAGCCTTCTGAATTAAGTTGTGCTCTTGGATCATCCCGTACCAACGCGACGCGTATTGCCGATGAACTGGaa                                                                                  >  2:938713‑M1/81‑151 (MQ=255)
                                                                       aTGCTGAAGGCTCAGGGGATTAACGAGACGTTGTTTATGGCGTTGATTACGCTGGAGTCTCAGGAAAACCACAGTATTCAGCCTTCTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatg                                                                                 <  2:1084297‑M1/151‑64 (MQ=255)
                                                                        tGCTGAAGGCTCAGGGGATTAACGAGACGTTGTTTATGGCGTTGATTACGCTGGAGTCTCAGGAAAACCACAGTATTCAGCCTTCTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgc                                                                                >  2:402720‑M1/1‑87 (MQ=255)
                                                                         gCTGAAGGCTCAGGGGATTAACGAGACGTTGTTTATGGCGTTGATTACGCTGGAGTCTCAGGAAAACCACTGTATTCAGCCTGCTGggtaatgacgccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgc                                                                                <  1:643640‑M1/150‑65 (MQ=255)
                                                                            gAAGGCTCAGGGGATTAACGAGACGTTGTTTATGGCGTTGATTACGCTGGAGTCTCAGGAAAACCACAGTATTCAGCCTTCTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagct                                                                            <  1:241478‑M1/151‑69 (MQ=255)
                                                                             gatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAGCCTTCTGAATTAAGTTGTGCTCTTGGATCATCCCGTACCAACGCGACGCGTATTGCCGATGAACTGGAAAAAcgc                                                                            >  2:200717‑M1/74‑150 (MQ=255)
                                                                             aaGGCTCAGGGGATTAACGAGACGTTGTTTATGGCGTTGATTACGCTGGAGTCTCAGGAAAACCACAGTATTCAGCCTTCTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctc                                                                           <  2:584494‑M1/151‑70 (MQ=255)
                                                                             aaGGCTCAGGGGATTAACGAGACGTTGTTTATGGCGTTGATTACGCTGGAGTCTCAGGAAAACCACAGTATTCAGCCTTCTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctc                                                                           <  2:524643‑M1/151‑70 (MQ=255)
                                                                             aaGGCTCAGGGGATTAACGAGACGTTGTTTATGGCGTTGATTACGCTGGAGTCTCAGGAAAACCACAGTATTCAGCCTTCTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctc                                                                           <  2:531869‑M1/151‑70 (MQ=255)
                                                                              atagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAGCCTTCTGAATTAAGTTGTGCTCTTGGATCATCCCGTACCAACGCGACGCGTATTGCCGATGAACTGGAAAAACGCgg                                                                          <  2:1113730‑M1/79‑1 (MQ=255)
                                                                                gCTCAGGGGATTAACGAGACGTTGTTTATGGCGTTGATTACGCTGGAGTCTCAGGAAAACCACAGTATTCAGCCTTCTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccac                                                                        <  2:1063541‑M1/151‑73 (MQ=255)
                                                                                gCTCAGGGGATTAACGAGACGTTGTTTATGGCGTTGATTACGCTGGAGTCTCAGGAAAACCACAGTATTCAGCCTTCTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccac                                                                        <  1:417892‑M1/151‑73 (MQ=255)
                                                                                agaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAGCCTTCTGAATTAAGTTGTGCTCTTGGATCATCCCGTACCAACGCGACGCGTATTGCCGATGAACTGGAAAAACGCGGt                                                                         >  1:747498‑M1/71‑150 (MQ=255)
                                                                                  aaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAGCCTTCTGAATTAAGTTGTGCTCTTGGATCATCCCGTACCAACGCGACGCGTATTGCCGATGAACTGGAAAAACGCGGTTgg                                                                      >  1:624514‑M1/69‑151 (MQ=255)
                                                                                   aacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAGCCTTCTGAATTAAGTTGTGCTCTTGGATCATCCCGTACCAACGCGACGCGTATTGCCGATGAACTGGAAAAACGCGGTTGGa                                                                     >  1:713984‑M1/68‑151 (MQ=255)
                                                                                      gggATTAACGAGACGTTGTTTATGGCGTTGATTACGCTGGAGTCTCAGGAAAACCACAGTATTCAGCCTTCTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattt                                                                  <  1:153519‑M1/151‑79 (MQ=255)
                                                                                       gaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAGCCTTCTGAATTAAGTTGTGCTCTTGGATCATCCCGTACCAACGCGACGCGTATTGCCGATGAACTGGAAAAACGCGGTTGGATCg                                                                  <  1:893247‑M1/87‑1 (MQ=255)
                                                                                         aTTAACGAGACGTTGTTTATGGCGTTGATTACGCTGGAGTCTCAGGAAAACCACAGTATTCAGCCTTCTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttga                                                               <  2:425590‑M1/151‑82 (MQ=255)
                                                                                         aTTAACGAGACGTTGTTTATGGCGTTGATTACGCTGGAGTCTCAGGAAAACCACAGTATTCAGCCTTCTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttga                                                               <  1:56926‑M1/151‑82 (MQ=255)
                                                                                            cactggagcacctcaaaaacgccatcatacactaaatcagtaagttggcagcatcaccAGCCTTCTGAATTAAGTTGTGCTCTTGGATCATCCCGTACCAACGCGACGCGTATTGCCGATGAACTGGAAAAACGCGGTTGGATCGAAcgtc                                                            >  1:273713‑M1/59‑151 (MQ=255)
                                                                                             aCGAGACGTTGTTTATGGCGTTGATTACGCTGGAGTCTCAGGAAAACCACAGTATTCAGCCTTCTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaac                                                           >  2:737900‑M1/1‑66 (MQ=255)
                                                                                               tggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAGCCTTCTGAATTAAGTTGTGCTCTTGGATCATCCCGTACCAACGCGACGCGTATTGCCGATGAACTGGAAAAACGCGGTTGGATCGAACGTCGTg                                                         <  2:22997‑M1/96‑1 (MQ=255)
                                                                                                ggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAGCCTTCTGAATTAAGTTGTGCTCTTGGATCATCCCGTACCAACGCGACGCGTATTGCCGATGAACTGGAAAAACGCGGTTGGATCGAACGTCGTg                                                         <  2:476336‑M1/96‑1 (MQ=255)
                                                                                                 gcgcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAGCCTTCTGAATTAAGTTGTGCTCTTGGATCATCCCGTACCAACGCGACGCGTATTGCCGATGAACTGGAAAAACGCGGTTGGATCGAACGTCGTGa                                                        <  1:771877‑M1/97‑1 (MQ=255)
                                                                                                 gagcacctcaaacacaccatcatacactaaatcagtaagttggcagcatcaccAGCCTTCTGAATTAAGTTGTGCTCTTGGATCATCCCGTACCAACGCGACGCGTATTGCCGATGAACTGGAAAAACGCGGTTGGATCGAACGTCGTGa                                                        <  1:1131803‑M1/97‑1 (MQ=255)
                                                                                                 gaCGTTGTTTATGGCGTTGATTACGCTGGAGTCTCAGGAAAACCACAGTATTCAGCCTTCTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgac                                                        >  2:1016945‑M1/1‑62 (MQ=255)
                                                                                                  aCGTTGTTTATGGCGTTGATTACGCTGGAGTCTCAGGAAAACCACAGTATTCAGCCTTCTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacag                                                      <  1:480175‑M1/151‑91 (MQ=255)
                                                                                                  aCGTTGTTTATGGCGTTGATTACGCTGGAGTCTCAGGAAAACCACAGTATTCAGCCTTCTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgaca                                                       <  1:1027287‑M1/150‑90 (MQ=255)
                                                                                                   gcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAGCCTTCTGAATTAAGTTGTGCTCTTGGATCATCCCGTACCAACGCGACGCGTATTGCCGATGAACTGGAAAAACGCGGTTGGATCGAACGTCGTGaa                                                       <  2:99527‑M1/98‑1 (MQ=255)
                                                                                                    gttgttTATGGCGTTGATTACGCTGGAGTCTCAGGAAAACCACAGTATTCAGCCTTCTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcg                                                    >  1:598181‑M1/1‑59 (MQ=255)
                                                                                                     ttgttTATGGCGTTGATTACGCTGGAGTCTCAGGAAAACCACAGTATTCAGCCTTCTGggtaatgactccaacttcttgatagtgttttatgttcagatactgcccgatgactttgtcatgcagctccaccgattttgagaacgacagc                                                     >  1:882491‑M1/1‑58 (MQ=255)
                                                                                                     acctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAGCCTTCTGAATTAAGTTGTGCTCTTGGATCATCCCGTACCAACGCGACGCGTATTGCCGATGAACTGGAAAAACGCGGTTGGATCGAACGTCGTGAAAGCg                                                   >  2:312191‑M1/50‑151 (MQ=255)
                                                                                                       gttTATGGCGTTGATTACGCTGGAGTCTCAGGAAAACCACAGTATTCATCCTTCTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgact                                                 >  1:968704‑M1/1‑56 (MQ=255)
                                                                                                          aaaaacaccatcatacactaaatcagtaagttggcagcatcaccAGCCTTCTGAATTAAGTTGTGCTCTTGGATCATCCCGTACCAACGCGACGCGTATTGCCGATGAACTGGAAAAACGCGGTTGGATCGAACGTCGTGAAAGCGATAAc                                              <  2:183680‑M1/107‑1 (MQ=255)
                                                                                                          aaaaacaccatcatacactaaatcagtaagttggcagcatcaccAGCCTTCTGAATTAAGTTGTGCTCTTGGATCATCCCGTACCAACGCGACGCGTATTGCCGATGAACTGGAAAAACGCGGTTGGATCGAACGTCGTGAAAGCGATAAc                                              >  2:78428‑M1/45‑151 (MQ=255)
                                                                                                             ggCGTTGATTACGCTGGAGTCTCAGGAAAACCACAGTATTCAGCCTTCTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgt                                            <  2:569194‑M1/150‑101 (MQ=255)
                                                                                                              acaccatcatacactaaatcagtaagttggcagcatcaccAGCCTTCTGAATTAAGTTGTGCTCTTGGATCATCCCGTACCAACGCGACGCGTATTGCCGATGAACTGGAAAAACGCGGTTGGATCGAACGTCGTGAAAGCGATAACGATc                                          <  2:320451‑M1/111‑1 (MQ=255)
                                                                                                              acaccatcatacactaaatcagtaagttggcagcatcaccAGCCTTCTGAATTAAGTTGTGCTCTTGGATCATCCCGTACCAACGCGACGCGTATTGCCGATGAACTGGAAAAACGCGGTTGGATCGAACGTCGTGAAAGCGATAACGATc                                          >  1:974789‑M1/41‑151 (MQ=255)
                                                                                                                 ccatcatacactaaatcagtaagttggcagcatcaccAGCCTTCTGAATTAAGTTGTGCTCTTGGATCATCCCGTACCAACGCGACGCGTATTGCCGATGAACTGGAAAAACGCGGTTGGATCGAACGTCGTGAAAGCGATAACGATcgcc                                       <  1:795508‑M1/114‑1 (MQ=255)
                                                                                                                    tcatacactaaatcagtaagttggcagcatcaccAGCCTTCTGAATTAAGTTGTGCTCTTGGATCATCCCGTACCAACGCGACGCGTATTGCCGATGAACTGGAAAAACGCGGTTGGATCGAACGTCGTGAAAGCGATAACGATCGCCGct                                    <  1:117028‑M1/117‑1 (MQ=255)
                                                                                                                    aTTACGCTGGAGTCTCATGAAAACCACAGTATTCAGCCTTCTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaatgacagcgacttccgtcccagc                                      <  1:448328‑M1/149‑107 (MQ=255)
                                                                                                                        cGCTGGAGTCTCAGGAAAACCACAGTATTCAGCCTTCTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgcc                                >  1:1034420‑M1/1‑39 (MQ=255)
                                                                                                                        acactaaatcagtaagttggcagcatcaccAGCCTTCTGAATTAAGTTGTGCTCTTGGATCATCCCGTACCAACGCGACGCGTATTGCCGATGAACTGGAAAAACGCGGTTGGATCGAACGTCGTGAAAGCGATAACGATCGCCGctgcct                                >  2:901180‑M1/31‑151 (MQ=255)
                                                                                                                         gCTGGAGTCTCAGGAAAACCACAGTATTCAGCCTTCTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgcc                                >  2:487151‑M1/1‑38 (MQ=255)
                                                                                                                         gCTGGAGTCTCAGGAAAACCACAGTATTCAGCCTTCTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgcc                                >  2:503200‑M1/1‑38 (MQ=255)
                                                                                                                           ctaaatcagtaagttggcagcatcaccAGCCTTCTGAATTAAGTTGTGCTCTTGGATCATCCCGTACCAACGCGACGCGTATTGCCGATGAACTGGAAAAACGCGGTTGGATCGAACGTCGTGAAAGCGATAACGATCGCCGctgcctgc                              <  2:46924‑M1/123‑1 (MQ=255)
                                                                                                                            ggAGTCTCAGGAAAACCACAGTATTCAGCCTTCTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggt                            <  1:1090674‑M1/151‑117 (MQ=255)
                                                                                                                            ggAGTCTCAGGAAAACCACAGTATTCAGCCTTCTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccag                              <  1:1017692‑M1/149‑115 (MQ=255)
                                                                                                                             aaatcagtaagttggcagcatcaccAGCCTTCTGAATTAAGTTGTGCTCTTGGATCATCCCGTACCAACGCGACGCGTATTGCCGATGAACTGGAAAAACGCGGTTGGATCGAACGTCGTGAAAGCGATAACGATCGCCGCTGCCTGCATc                           >  1:1081258‑M1/26‑151 (MQ=255)
                                                                                                                              aatcagtaagttggcagcatcaccAGCCTTCTGAATTAAGTTGTGCTCTTGGATCATCCCGTACCAACGCGACGCGTATTGCCGATGAACTGGAAAAACGCGGTTGGATCGAACGTCGTGAAAGCGATAACGATCGCCGCTGCCTGCATCt                          >  1:31091‑M1/25‑151 (MQ=255)
                                                                                                                                tcagtaagttggcagcatcaccAGCCTTCTGAATTAAGTTGTGCTCTTGGATCATCCCGTACCAACGCGACGCGTATTGCCGATGAACTGGAAAAACGCGGTTGGATCGAACGTCGTGAAAGCGATAACGATCGCCGCTGCCTGCATCTGc                        <  1:341583‑M1/129‑1 (MQ=255)
                                                                                                                                  agtaagttggcagcatcaccAGCCTTCTGAATTAAGTTGTGCTCTTGGATCATCCCGTACCAACGCGACGCGTATTGCCGATGAACTGGAAAAACGCGGTTGGATCGAACGTCGTGAAAGCGATAACGATCGCCGCTGCCTGCATCTGCaa                      >  1:764229‑M1/21‑151 (MQ=255)
                                                                                                                                  agtaagttggcagcatcaccAGCCTTCTGAATTAAGTTGTGCTCTTGGATCATCCCGTACCAACGCGACGCGTATTGCCGATGAACTGGAAAAACGCGGTTGGATCGAACGTCGTGAAAGCGATAACGATCGCCGCTGCCTGCATCTGCa                       <  1:1099884‑M1/130‑1 (MQ=255)
                                                                                                                                    aGGAAAACCACAGTATTCAGCCTTCTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctc                    >  1:760791‑M1/1‑27 (MQ=255)
                                                                                                                                     aagttggcagcatcaccAGCCTTCTGAATTAAGTTGTGCTCTTGGATCATCCCGTACCAACGCGACGCGTATTGCCGATGAACTGGAAAAACGCGGTTGGATCGAACGTCGTGAAAGCGATAACGATCGCCGCTGCCTGCATCTGCAAtt                    <  1:667336‑M1/133‑1 (MQ=255)
                                                                                                                                     aagttggcagcatcaccAGCCTTCTGAATTAAGTTGTGCTCTTGGATCATCCCGTACCAACGCGACGCGTATTGCCGATGAACTGGAAAAACGCGGTTGGATCGAACGTCGTGAAAGCGATAACGATCGCCGCTGCCTGCATCTGCAAtt                    <  2:1055752‑M1/133‑1 (MQ=255)
                                                                                                                                        ttggcagcatcaccAGCCTTCTGAATTAAGTTGTGCTCTTGGATCATCCCGTACCAACGCGACGCGTATTGCCGATGAACTGGAAAAACGCGGTTGGATCGAACGTCGTGAAAGCGATAACGATCGCCGCTGCCTGCATCTGCAATTAACg                <  2:182324‑M1/137‑1 (MQ=255)
                                                                                                                                                     cAGCCTTCTGAATTAAGTTGTGCTCTTGGATCATCCCGTACCAACGCGACGCGTATTGCCGATGAACTGGAAAAACGCGGTTGGATCGAACGTCGTGAAAGCGATAACGATCGCCGCTGCCTGCATCTGCAATTAACGGAAAAAGGTCACg   <  1:97553‑M1/150‑1 (MQ=255)
                                                                                                                                                     cAGCCTTCTGAATTAAGTTGTGCTCTTGGATCATCCCGTACCAACGCGACGCGTATTGCCGATGAACTGGAAAAACGCGGTTGGATCGAACGTCGTGAAAGCGATAACGATCGCCGCTGCCTGCATCTGCAATTAACGGAAAAAGGTCACg   <  1:1046803‑M1/150‑1 (MQ=255)
                                                                                                                                                      aGCCTTCTGAATTAAGTTGTGCTCTTGGATCATCCCGTACCAACGCGACGCGTATTGCCGATGAACTGGAAAAACGCGGTTGGATCGAACGTCGTGAAAGCGATAACGATCGCCGCTGCCTGCATCTGCAATTAACGGAAAAAGGTCACGa  <  1:456747/151‑1 (MQ=255)
                                                                                                                                                      |                                                                                                                                                      
CTTATCAGGAGATCCTTCTGACTCGTCTTTGCATGCACATGCAAAGCAAGCTGCTGGAGAACCGCAATAAAATGCTGAAGGCTCAGGGGATTAACGAGACGTTGTTTATGGCGTTGATTACGCTGGAGTCTCAGGAAAACCACAGTATTCAGCCTTCTGAATTAAGTTGTGCTCTTGGATCATCCCGTACCAACGCGACGCGTATTGCCGATGAACTGGAAAAACGCGGTTGGATCGAACGTCGTGAAAGCGATAACGATCGCCGCTGCCTGCATCTGCAATTAACGGAAAAAGGTCACGA  >  NC_000913/2810837‑2811137

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.