| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 3,440,937 | (CGCTCT)1→2 | coding (93/990 nt) | rpoA ← | RNA polymerase, alpha subunit |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3440931 | 1 (0.010) | 104 (1.230) +CGCTCT |
82/274 | 0.0 | 99.1% | coding (99/990 nt) | rpoA | RNA polymerase, alpha subunit |
| ? | NC_000913 | 3440932 = | 1 (0.010) | coding (98/990 nt) | rpoA | RNA polymerase, alpha subunit | |||||
Only 100 of 109 total aligned reads displayed.
AGGATTTCCAGGATATCTTCCTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTAAGCTTTACTTGGAGTAAAGCTCGACGATCAG > NC_000913/3440785‑3441081 | aGGATTTCCAGGATATCTTCCTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgct < 2:782992‑M1/151‑5 (MQ=255)aGGATTTCCAGGATATCTTCCTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgc > 2:502602‑M1/1‑147 (MQ=255) aTTTCCAGGATATCTTCCTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctc < 2:1070311‑M1/151‑8 (MQ=255) aTTTCCAGGATATCTTCCTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctc < 2:558933‑M1/151‑8 (MQ=255) aTTTCCAGGATATCTTCCTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctc > 2:244673‑M1/1‑144 (MQ=255) ttCCAGGATATCTTCCTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgc > 1:519532‑M1/1‑142 (MQ=255) ttCCAGGATATCTTCCTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcg > 2:937421‑M1/1‑142 (MQ=255) tCCAGGATATCTTCCTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgc < 2:262878‑M1/150‑10 (MQ=255) ccAGGATATCTTCCTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctc > 1:1200451‑M1/1‑140 (MQ=255) ccAGGATATCTTCCTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCACGCTCTAAAg < 2:663490/150‑1 (MQ=255) cAGGATATCTTCCTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctct > 1:571784‑M1/1‑139 (MQ=255) cAGGATATCTTCCTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctct > 1:602541‑M1/1‑139 (MQ=255) gATATCTTCCTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaa > 1:945580‑M1/1‑136 (MQ=255) atCTTCCTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggc > 2:696246‑M1/1‑133 (MQ=255) ccTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaag < 2:1244329‑M1/151‑24 (MQ=255) tGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaaggg > 1:115455‑M1/1‑126 (MQ=255) aaCGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtc > 1:413581‑M1/1‑124 (MQ=255) aaCGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtc < 1:106685‑M1/151‑28 (MQ=255) aaCGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGACACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtc > 1:299665‑M1/1‑124 (MQ=255) ccTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcacct > 2:942422‑M1/1‑120 (MQ=255) cttcttTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcacctt > 1:445386‑M1/1‑119 (MQ=255) tcttTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttgg > 2:115090‑M1/1‑117 (MQ=255) tcttTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttg < 2:1173460‑M1/150‑34 (MQ=255) tttGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcg > 2:849656‑M1/1‑115 (MQ=255) ttGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcg < 2:290076‑M1/150‑37 (MQ=255) ttGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcg < 2:1365001‑M1/150‑37 (MQ=255) ttGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggc < 2:809878‑M1/149‑36 (MQ=255) ttGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggc < 2:1162196‑M1/149‑36 (MQ=255) cTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcg > 2:1139986‑M1/1‑108 (MQ=255) cTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcg > 1:89319‑M1/1‑108 (MQ=255) gTACTCAGGTAGTACACCATCAATCTCATCCTCGGTCACCGCGCAACCCGGCATCGATGAGAGGAGAATACGGCGGAGTACGTTACCCAGAGTATGGCCGAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaa < 1:1247465‑M1/151‑46 (MQ=255) tACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaac > 1:1368145‑M1/1‑105 (MQ=255) tACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaac > 2:111508‑M1/1‑105 (MQ=255) tCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactc > 1:83718‑M1/1‑102 (MQ=255) tagtaCACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgc > 1:239246‑M1/1‑97 (MQ=255) agtaCACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgct > 2:895375‑M1/1‑96 (MQ=255) cacCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgat < 1:384697‑M1/151‑60 (MQ=255) cacCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgat > 2:177859‑M1/1‑92 (MQ=255) acCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgat > 1:805930‑M1/1‑91 (MQ=255) cATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatc > 2:863347‑M1/1‑89 (MQ=255) aaTCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaacc > 2:1202331‑M1/1‑85 (MQ=255) aaTCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaacc < 2:848183‑M1/151‑67 (MQ=255) aaTCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaacc < 1:1138250‑M1/151‑67 (MQ=255) cAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccag < 2:1242277‑M1/148‑69 (MQ=255) cAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaacca < 1:940418‑M1/147‑68 (MQ=255) aCCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcg > 2:413922‑M1/1‑78 (MQ=255) cTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggt > 2:774031‑M1/1‑76 (MQ=255) cTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggt > 2:855039‑M1/1‑76 (MQ=255) ggTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggtttt < 2:844107‑M1/151‑79 (MQ=255) ggTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggtttt < 1:936813‑M1/151‑79 (MQ=255) ggTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggtttt < 2:1185232‑M1/151‑79 (MQ=255) tCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggtttt > 1:346840‑M1/1‑71 (MQ=255) aCCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttaga > 1:984888‑M1/1‑69 (MQ=255) aCCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttaga > 2:203479‑M1/1‑69 (MQ=255) ccGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaa > 2:630029‑M1/1‑68 (MQ=255) cAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctg < 2:934712‑M1/151‑89 (MQ=255) cAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctg < 2:569446‑M1/151‑89 (MQ=255) aaCCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgt < 1:1205626‑M1/151‑90 (MQ=255) aaCCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgt > 1:634359‑M1/1‑62 (MQ=255) aaCCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgt > 2:1051593‑M1/1‑62 (MQ=255) aCCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgt > 2:643234‑M1/1‑61 (MQ=255) cGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcaca < 1:475672‑M1/151‑94 (MQ=255) cATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGAATGGCCAAAGCAAcgctttcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcggggttttagaaactctgtcacaga > 1:1235139‑M1/1‑55 (MQ=255) cGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccc < 1:584191‑M1/151‑100 (MQ=255) aTGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctg < 1:239976‑M1/151‑102 (MQ=255) aTGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctg < 1:863447‑M1/151‑102 (MQ=255) tGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgc > 1:1325316‑M1/1‑49 (MQ=255) tGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGCATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgc > 2:1037881‑M1/1‑49 (MQ=255) gagCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcatt < 2:700696‑M1/151‑106 (MQ=255) agCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattg < 2:58827‑M1/151‑107 (MQ=255) gCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgt > 2:716191‑M1/1‑44 (MQ=255) gCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgt < 1:1142623‑M1/151‑108 (MQ=255) aGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgtgt < 1:1185188‑M1/151‑110 (MQ=255) aaTACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgtgtcc > 1:605733‑M1/1‑40 (MQ=255) aTACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgtgtcct > 2:141640‑M1/1‑39 (MQ=255) aCGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgtgtcctc < 1:881232‑M1/150‑114 (MQ=255) aCGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgtgtcctc < 2:325360‑M1/150‑114 (MQ=255) gcgcAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgtgtcctctctt < 2:155777‑M1/151‑118 (MQ=255) gcgcAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgtgtcctctctt < 2:921911‑M1/151‑118 (MQ=255) cAGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgtgtcctctctttg > 1:329575‑M1/1‑31 (MQ=255) aGTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgtgtcctctctttggt > 2:1226192‑M1/1‑30 (MQ=255) gTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgtgtcctctctttggta < 1:51120‑M1/151‑123 (MQ=255) gTGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgtgtcctctctttggt > 1:216214‑M1/1‑29 (MQ=255) tGCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgtgtcctctctttggta > 1:1189808‑M1/1‑28 (MQ=255) gCGTTACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcgaccaggcgcggttttagaaactctgtcacagaaccctgcattgtgtcctctcttgggtac < 1:351063‑M1/150‑124 (MQ=255) ttACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgtgtcctctctttggtacta > 1:874240‑M1/1‑24 (MQ=255) tACCCAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgtgtcctctctttggtactaag < 2:485092‑M1/150‑128 (MQ=255) cccAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgtgtcctctctttggtactaagctt > 1:505451‑M1/1‑21 (MQ=255) cccAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgtgtcctctctttggtactaagctt < 1:61759‑M1/151‑131 (MQ=255) ccAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgtgtcctctctttggtactaagcttt < 2:461904‑M1/151‑132 (MQ=255) ccAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgtgtcctctctttggtactaagcttt > 2:510610‑M1/1‑20 (MQ=255) ccAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgtgtcctctctttggtactaagcttt > 2:1249208‑M1/1‑20 (MQ=255) cAGAGTATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgtgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgtgtcctctctttggtactaagcttt > 2:470089‑M1/1‑19 (MQ=255) tATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgtgtcctctctttggtactaagctttacttgg > 2:320984‑M1/1‑14 (MQ=255) tATGGCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgtgtcctctctttggtactaagctttacttgg > 2:370701‑M1/1‑14 (MQ=255) ggCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgtgtcctctctttggtactaagctttacttggag < 2:671209‑M1/150‑140 (MQ=255) ggCCAAAGCCAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgtgtcctctctttggtactaagctttacttggag > 2:623836‑M1/1‑11 (MQ=255) ccAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgtgtcctctctttggtactaagctttacttggagtaaagctcg < 2:906797‑M1/151‑149 (MQ=255) cAcgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgtgtcctctctttggtactaagctttacttggagtaaagctc > 2:198267‑M1/1‑2 (MQ=255) acgctctcgctctaaaggctcaagggtcaccttggcgtgcgtcgaactcacttgctcgatatcaaccaggcgcggttttagaaactctgtcacagaaccctgcattgtgtcctctctttggtactaagctttacttggagtaaagctcgac < 2:445388‑M1/151‑151 (MQ=255) | AGGATTTCCAGGATATCTTCCTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTAAGCTTTACTTGGAGTAAAGCTCGACGATCAG > NC_000913/3440785‑3441081 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |