Predicted mutation
evidence seq id position mutation annotation gene description
JC NC_000913 3,440,937 (CGCTCT)1→2 coding (93/990 nt) rpoA ← RNA polymerase, alpha subunit

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 34409311 (0.010)104 (1.230)
+CGCTCT
82/274 0.0 99.1% coding (99/990 nt) rpoA RNA polymerase, alpha subunit
?NC_000913 3440932 = 1 (0.010)coding (98/990 nt) rpoA RNA polymerase, alpha subunit

Only 100 of 112 total aligned reads displayed.

AGCAGGATTTCCAGGATATCTTCCTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTAAGCTTTACTTGGAGTAAAGCTCGACGATCAGG  >  NC_000913/3440782‑3441082
                                                                                                                                                      |                                                                                                                                                      
atttccaggatatcttcctgaacgccttctttggtgctgtactcatgtagtacaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctc                                                                                                                                                        <  2:1070311‑M2/1‑1 (MQ=255)
atttccaggatatcttcctgaacgccttctttggtgctgtactcatgtagtacaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctc                                                                                                                                                        >  2:244673‑M2/151‑151 (MQ=255)
atttccaggatatcttcctgaacgccttctttggtgctgtactcatgtagtacaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctc                                                                                                                                                        <  2:558933‑M2/1‑1 (MQ=255)
  ttccaggatatcttcctgaacgccttctttggtgctgtactcatgtagtacaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctcgc                                                                                                                                                      >  1:519532‑M2/149‑151 (MQ=255)
  ttccaggatatcttcctgaacgccttctttggtgctgtactcatgtagtacaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctcg                                                                                                                                                       >  2:937421‑M2/149‑150 (MQ=255)
   tccaggatatcttcctgaacgccttctttggtgctgtactcatgtagtacaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctcgc                                                                                                                                                      <  2:262878‑M2/3‑1 (MQ=255)
    ccaggatatcttcctgaacgccttctttggtgctgtactcatgtagtacaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctcgctc                                                                                                                                                    >  1:1200451‑M2/147‑151 (MQ=255)
     caggatatcttcctgaacgccttctttggtgctgtactcatgtagtacaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctcgctct                                                                                                                                                   >  1:571784‑M2/146‑151 (MQ=255)
     caggatatcttcctgaacgccttctttggtgctgtactcatgtagtacaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctcgctct                                                                                                                                                   >  1:602541‑M2/146‑151 (MQ=255)
        gatatcttcctgaacgccttctttggtgctgtactcatgtagtacaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTaa                                                                                                                                                 >  1:945580‑M2/143‑150 (MQ=255)
          ccAGGATATCTTCCTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCACGCTCTAAAg                                                                                                                                               <  2:663490/150‑1 (MQ=255)
                cctgaacgccttctttggtgctgtactcatgtagtacaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAg                                                                                                                                        <  2:1244329‑M2/17‑1 (MQ=255)
                  tgaacgccttctttggtgctgtactcatgtagtacaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAggg                                                                                                                                      >  1:115455‑M2/133‑151 (MQ=255)
                    aacgccttctttggtgctgtactcatgtagtacaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTc                                                                                                                                    <  1:106685‑M2/21‑1 (MQ=255)
                    aacgccttctttggtgctgtactcatgtagtacaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTc                                                                                                                                    >  1:413581‑M2/131‑151 (MQ=255)
                    aacgccttctttggtgctgtactcatgtagtacaccatcaatctcaacctcggacaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTc                                                                                                                                    >  1:299665‑M2/131‑151 (MQ=255)
                        ccttctttggtgctgtactcatgtagtacaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCt                                                                                                                                >  2:942422‑M2/127‑151 (MQ=255)
                         cttctttggtgctgtactcatgtagtacaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCtt                                                                                                                               >  1:445386‑M2/126‑151 (MQ=255)
                           tctttggtgctgtactcatgtagtacaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTgg                                                                                                                             >  2:115090‑M2/124‑151 (MQ=255)
                           tctttggtgctgtactcatgtagtacaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTg                                                                                                                              <  2:836026‑M2/27‑1 (MQ=255)
                              ttggtgctgtactcatgtagtacaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGgcg                                                                                                                           <  2:290076‑M2/30‑1 (MQ=255)
                              ttggtgctgtactcatgtagtacaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGgcg                                                                                                                           <  2:1365001‑M2/30‑1 (MQ=255)
                              ttggtgctgtactcatgtagtacaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGgc                                                                                                                            <  2:1162196‑M2/29‑1 (MQ=255)
                              ttggtgctgtactcatgtagtacaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGgc                                                                                                                            <  2:809878‑M2/29‑1 (MQ=255)
                                    ctgtactcatgtagtacaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCg                                                                                                                    >  2:1139986‑M2/115‑151 (MQ=255)
                                    ctgtactcatgtagtacaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCg                                                                                                                    >  1:89319‑M2/115‑151 (MQ=255)
                                       tactcatgtagtacaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAAc                                                                                                                 >  1:1368145‑M2/112‑151 (MQ=255)
                                       tactcatgtagtacaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAAc                                                                                                                 >  2:111508‑M2/112‑151 (MQ=255)
                                               tagtacaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGc                                                                                                         >  1:239246‑M2/104‑151 (MQ=255)
                                                agtacaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCt                                                                                                        >  2:895375‑M2/103‑151 (MQ=255)
                                                   acaccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCg                                                                                                      >  1:488116‑M2/100‑150 (MQ=255)
                                                    caccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGat                                                                                                    >  2:177859‑M2/99‑151 (MQ=255)
                                                    caccatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGat                                                                                                    <  1:384697‑M2/53‑1 (MQ=255)
                                                     accatcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGat                                                                                                    >  1:805930‑M2/98‑150 (MQ=255)
                                                       catcaatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATc                                                                                                 >  2:863347‑M2/96‑151 (MQ=255)
                                                           aatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAAcc                                                                                             >  2:1202331‑M2/92‑151 (MQ=255)
                                                           aatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAAcc                                                                                             <  2:848183‑M2/60‑1 (MQ=255)
                                                           aatctcaacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAAcc                                                                                             <  1:1138250‑M2/60‑1 (MQ=255)
                                                                caacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCa                                                                                            <  1:940418‑M2/61‑1 (MQ=255)
                                                                caacctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAg                                                                                           <  2:1242277‑M2/62‑1 (MQ=255)
                                                                  acctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGcgcg                                                                                      >  2:413922‑M2/85‑151 (MQ=255)
                                                                    ctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGt                                                                                    >  2:855039‑M2/83‑151 (MQ=255)
                                                                    ctcggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGt                                                                                    >  2:774031‑M2/83‑151 (MQ=255)
                                                                       ggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGtttt                                                                                 <  1:936813‑M2/72‑1 (MQ=255)
                                                                       ggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGtttt                                                                                 <  2:844107‑M2/72‑1 (MQ=255)
                                                                       ggtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGtttt                                                                                 <  2:1185232‑M2/72‑1 (MQ=255)
                                                                        gtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTa                                                                                <  2:1093473‑M2/73‑1 (MQ=255)
                                                                        gtcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTa                                                                                <  2:60715‑M2/73‑1 (MQ=255)
                                                                         tcaccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGtttt                                                                                 >  1:346840‑M2/78‑149 (MQ=255)
                                                                           accgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGa                                                                              >  2:203479‑M2/76‑150 (MQ=255)
                                                                            ccgcgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGaa                                                                             >  2:630029‑M2/75‑150 (MQ=255)
                                                                               cgcaacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAActc                                                                         <  2:134727‑M2/80‑1 (MQ=255)
                                                                                 caacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTg                                                                       <  2:934712‑M2/82‑1 (MQ=255)
                                                                                 caacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTg                                                                       <  2:569446‑M2/82‑1 (MQ=255)
                                                                                  aacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGt                                                                      >  1:634359‑M2/69‑151 (MQ=255)
                                                                                  aacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGt                                                                      >  2:1051593‑M2/69‑151 (MQ=255)
                                                                                  aacccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGt                                                                      <  1:1205626‑M2/83‑1 (MQ=255)
                                                                                   acccggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGt                                                                      >  2:643234‑M2/68‑150 (MQ=255)
                                                                                      cggcatcgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTcaca                                                                  <  1:475672‑M2/87‑1 (MQ=255)
                                                                                         catcgatgagagcagaatacggcgcagtgcgttacccagagaatggccaaagcaacgctttCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGGGGTTTTAGAAACTCTGTCACAGa                                                                >  1:1235139‑M2/62‑150 (MQ=255)
                                                                                            cgatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAAccc                                                            <  1:584191‑M2/93‑1 (MQ=255)
                                                                                             gatgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCt                                                           <  1:21619‑M2/94‑1 (MQ=255)
                                                                                              atgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTg                                                          <  1:863447‑M2/95‑1 (MQ=255)
                                                                                              atgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTg                                                          <  1:239976‑M2/95‑1 (MQ=255)
                                                                                               tgagagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGc                                                         >  1:1325316‑M2/56‑151 (MQ=255)
                                                                                               tgagagcagaatacggcgcagtgcgttacccagagcatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGc                                                         >  2:1037881‑M2/56‑151 (MQ=255)
                                                                                                  gagcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCAtt                                                      <  2:700696‑M2/99‑1 (MQ=255)
                                                                                                   agcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATtg                                                     <  2:58827‑M2/100‑1 (MQ=255)
                                                                                                    gcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATtgt                                                    >  2:716191‑M2/51‑151 (MQ=255)
                                                                                                    gcagaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATtgt                                                    <  1:1142623‑M2/101‑1 (MQ=255)
                                                                                                      agaatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTgtgt                                                  <  1:1185188‑M2/103‑1 (MQ=255)
                                                                                                        aatacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTcc                                                >  1:605733‑M2/47‑151 (MQ=255)
                                                                                                         atacggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCct                                               >  2:141640‑M2/46‑151 (MQ=255)
                                                                                                           acggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCctc                                              <  1:881232‑M2/107‑1 (MQ=255)
                                                                                                           acggcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCctc                                              <  2:325360‑M2/107‑1 (MQ=255)
                                                                                                              gcgcagtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCtt                                          <  2:921911‑M2/111‑1 (MQ=255)
                                                                                                                  agtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGt                                      >  2:1226192‑M2/37‑151 (MQ=255)
                                                                                                                   gtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGt                                      >  1:216214‑M2/36‑150 (MQ=255)
                                                                                                                   gtgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTa                                     <  1:51120‑M2/116‑1 (MQ=255)
                                                                                                                    tgcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTa                                     >  1:1189808‑M2/35‑150 (MQ=255)
                                                                                                                     gcgttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCGACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTGGGTAc                                    <  1:351063‑M2/117‑1 (MQ=255)
                                                                                                                        ttacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTa                                  >  1:874240‑M2/31‑149 (MQ=255)
                                                                                                                         tacccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTAAg                                <  2:485092‑M2/121‑1 (MQ=255)
                                                                                                                           cccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTAAGCtt                             <  1:61759‑M2/124‑1 (MQ=255)
                                                                                                                            ccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTAAGCttt                            >  2:1249208‑M2/27‑151 (MQ=255)
                                                                                                                            ccagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTAAGCttt                            <  2:461904‑M2/125‑1 (MQ=255)
                                                                                                                             cagagtatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGTGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTAAGCttt                            >  2:470089‑M2/26‑150 (MQ=255)
                                                                                                                                  tatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTAAGCTTTACTTgg                      >  2:320984‑M2/21‑151 (MQ=255)
                                                                                                                                  tatggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTAAGCTTTACTTgg                      >  2:370701‑M2/21‑151 (MQ=255)
                                                                                                                                     ggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTAAGCTTTACTTGGAg                    >  2:623836‑M2/18‑150 (MQ=255)
                                                                                                                                     ggccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTAAGCTTTACTTGGAg                    <  2:671209‑M2/133‑1 (MQ=255)
                                                                                                                                      gccaaagccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTAAGCTTTACTTGGAGt                   >  2:367872‑M2/17‑150 (MQ=255)
                                                                                                                                           agccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTAAGCTTTACTTGGAGTAAAGCt             <  1:849648‑M2/140‑1 (MQ=255)
                                                                                                                                             ccacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTAAGCTTTACTTGGAGTAAAGCTcg           <  2:906797‑M2/142‑1 (MQ=255)
                                                                                                                                              cacgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTAAGCTTTACTTGGAGTAAAGCTc            >  2:198267‑M2/9‑149 (MQ=255)
                                                                                                                                               acgctctCGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTAAGCTTTACTTGGAGTAAAGCTcgac         <  2:445388‑M2/144‑1 (MQ=255)
                                                                                                                                                      cGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTAAGCTTTACTTGGAGTAAAGCTCGACGATCAgg  <  1:417088/151‑1 (MQ=255)
                                                                                                                                                      cGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTAAGCTTTACTTGGAGTAAAGCTCGACGATCAgg  <  2:443735/151‑1 (MQ=255)
                                                                                                                                                      cGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTAAGCTTTACTTGGAGTAAAGCTCGACGATCAg   <  2:805937/150‑1 (MQ=255)
                                                                                                                                                      cGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGCCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTAAGCTTTACTTGGAGTAAAGCTCGACGATCAgg  >  1:310933/1‑151 (MQ=255)
                                                                                                                                                      |                                                                                                                                                      
AGCAGGATTTCCAGGATATCTTCCTGAACGCCTTCTTTGGTGCTGTACTCATGTAGTACACCATCAATCTCAACCTCGGTCACCGCGCAACCCGGCATCGATGAGAGCAGAATACGGCGCAGTGCGTTACCCAGAGTATGGCCAAAGCCACGCTCTAAAGGCTCAAGGGTCACCTTGGCGTGCGTCGAACTCACTTGCTCGATATCAACCAGGCGCGGTTTTAGAAACTCTGTCACAGAACCCTGCATTGTGTCCTCTCTTTGGTACTAAGCTTTACTTGGAGTAAAGCTCGACGATCAGG  >  NC_000913/3440782‑3441082

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.