| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,916,392 | Δ12 bp | coding (1336‑1347/2757 nt) | barA → | hybrid sensory histidine kinase, in two‑component regulatory system with UvrY |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2916392 | 2916403 | 12 | 55 [0] | [0] 55 | barA | hybrid sensory histidine kinase, in two‑component regulatory system with UvrY |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2916391 | 0 (0.000) | 54 (0.880) | 50/276 | 0.3 | 100% | coding (1335/2757 nt) | barA | hybrid sensory histidine kinase, in two‑component regulatory system with UvrY |
| ? | NC_000913 | 2916404 = | 0 (0.000) | coding (1348/2757 nt) | barA | hybrid sensory histidine kinase, in two‑component regulatory system with UvrY | |||||
GATAACGTGATCGGCGACCCGCTGCGATTACAGCAAATCATCACTAACCTGGTGGGGAATGCAATTAAATTCACCGAGAATGGCAACATTGATATTCTGGTAGAAAAACGTGCGCTGAGTAATACCAAAGTGCAGATTGAAGTGCAGATTCGGGATACCGGCATTGGTATTCCTGAACGCGATCAATCGCGCTTATTCCAGGCCTTCCGACAGGCTGATGCCAGTATTTCCCGCCGTCATGGTGGCACCGGGCTGGGGCTGGTGATTACACAAAAACTGGTTAATGAAATGGG > NC_000913/2916254‑2916546 | agcgacgtgcctgataacgtgatcggcgacccgctgcgattacagcaaatcatcactaacctggtggggaatgcaattaaattcaccgagaatggcaacattgatattctggtagaaaaacgtgcgctgagtaataccaaagtgcagattc > 2:85340‑M2/151‑151 (MQ=255) acgtgcctgataacgtgatcggcgacccgctgcgattacagcaaatcatcactaacctggtggggaatgcaattaaattcaccgagaatggcaacattgatattctggtagaaaaacgtgcgctgagtaataccaaagtgcagattCggg > 2:973552‑M2/147‑150 (MQ=255) gtgcctgataacgtgatcggcgacccgctgcgattacagcaaatcatcactaacctggtggggaatgcaattaaattcaccgagaatggcaacattgatattctggtagaaaaacgtgcgctgagtaataccaaagtgcagattCGGGAt > 2:474480‑M2/145‑150 (MQ=255) gtgcctgataacgtgatcggcgacccgctgcgattacagcaaatcatcactaacctggtggggaatgcaattaaattcaccgagaatggcaacattgatattctggtagaaaaacgtgcgctgagtaataccaaagtgcagattCGGGAt > 2:602281‑M2/145‑150 (MQ=255) gtgcctgataacgtgatcggcgacccgctgcgattacagcaaatcatcactaacctggtggggaatgcaattaaattcaccgagaatggcaacattgatattctggtagaaaaacgtgcgctgagtaataccaaagtgcagattCGGGAt > 2:643806‑M2/145‑150 (MQ=255) tgcctgataacgtgatcggcgacccgctgcgattacagcaaatcatcactaacctggtggggaatgcaattaaattcaccgagaatggcaacattgatattctggtagaaaaacgtgcgctgagtaataccaaagtgcagattCGGGATAc > 2:738385‑M2/144‑151 (MQ=255) gataacgtgatcggcgacccgctgcgattacagcaaatcatcactaacctggtggggaatgcaattaaattcaccgagaatggcaacattgatattctggtagaaaaacgtgcgctgagtaataccaaagtgcagattCGGGATACCgg < 1:744398‑M2/11‑1 (MQ=255) gataacgtgatcggcgacccgctgcgattacagcaaatcatcactaacctggtggggaatgcaattaaattcaccgagaatggcaacattgatattctggtagaaaaacgtgcgctgagtaataccaaagtgcagattCGGGATACCgg < 1:704000‑M2/11‑1 (MQ=255) gataacgtgatcggcgacccgctgcgattacagcaaatcatcactaacctggtggggaatgcaattaaattcaccgagaatggcaacattgatattctggtagaaaaacgtgcgctgagtaataccaaagtgcagattCGGGATACCGGc > 2:290115‑M2/139‑150 (MQ=255) aacgtgatcggcgacccgctgcgattacagcaaatcatcactaacctggtggggaatgcaattaaattcaccgagaatggcaacattgatattctggtagaaaaacgtgcgctgagtaataccaaagtgcagattCGGGATACCGGCAtt < 1:91692‑M2/15‑1 (MQ=255) cgtgatcggcgacccgctgcgattacagcaaatcatcactatcctggtggggaatgcaattaaattcaccgagaatggcaacattgatatgctggtagaaaaccttgcgctgagtaataccaaagtgcagattCGGGATACCGGCAt < 1:846415‑M2/14‑1 (MQ=255) gtgatcggcgacccgctgcgattacagcaaatcatcactaacctggtggggaatgcaattaaattcaccgagaatggcaacattgatattctggtagaaaaacgtgcgctgagtaataccaaagtgcagattCGGGATACCGGCATTGGTa < 1:495338‑M2/19‑1 (MQ=255) gatcggcgacccgctgcgattacagcaaatcatcactaacctggtggggaatgcaattaaattcaccgagaatggcaacattgatattctggtagaaaaacgtgcgctgagtaataccaaagtgcagattCGGGATACCGGCATTGGTAtt > 2:640767‑M2/131‑151 (MQ=255) gatcggcgacccgctgcgattacagcaaatcatcactaacctggtggggaatgcaattaaattcaccgagaatggcaacattgatattctggtagaaaaacgtgcgctgagtaataccaaagtgcagattCGGGATACCGGCATTGGTAt < 2:951998‑M2/20‑1 (MQ=255) cgacccgctgcgattacagcaaatcatcactaacctggtggggaatgcaattaaattcaccgagaatggcaacattgatattctggtagaaaaacgtgcgctgagtaataccaaagtgcagattCGGGATACCGGCATTGGTATTCCTGaa < 2:399672‑M2/27‑1 (MQ=255) gacccgctgcgattacagcaaatcatcactaacctggtggggaatgcaattaaattcaccgagaatggcaacattgatattctggtagaaaaacgtgcgctgagtaataccaaagtgcagattCGGGATACCGGCATTGGTATTCCTGAAc < 1:810541‑M2/28‑1 (MQ=255) gcgattacagcaaatcatcactaacctggtggggaatgcaattaaattcaccgagaatggcaacattgatattctggtagaaaaacgtgcgctgagtaataccaaagtgcagattCGGGATACCGGCATTGGTATTCCTGAACGCGATc < 1:541363‑M2/34‑1 (MQ=255) attacagcaaatcatcactaacctggtggggaatgcaattaaattcaccgagaatggcaacattgatattctggtagaaaaacgtgcgctgagtaataccaaagtgcagattCGGGATACCGGCATTGGTATTCCTGAACGCGATCAATcg > 2:250519‑M2/113‑151 (MQ=255) tacagcaaatcatcactaacctggtggggaatgcaattaaattcaccgagaatggcaacattgatattctggtagaaaaacgtgcgctgagtaataccaaagtgcagattCGGGATACCGGCATTGGTATTCCTGAACGCGATCAATcgc < 1:366338‑M2/40‑1 (MQ=255) caaatcatcactaacctggtggggaatgcaattaaattcaccgagaatggcaacattgatattctggtagaaaaacgtgcgctgagtaataccaaagtgcagattCGGGATACCGGCATTGGTATTCCTGAACGCGATCAATCGCGCTTAt > 1:441990‑M2/106‑151 (MQ=255) aatcatcactaacctggtggggaatgcaattaaattcaccgagaatggcaacattgatattctggtagaaaaacgtgcgctgagtaataccaaagtgcagattCGGGATACCGGCATTGGTATTCCTGAACGCGATCAATCGCGCTTATTc < 1:162978‑M2/48‑1 (MQ=255) cactaacctggtggggaatgcaattaaattcaccgagaatggcaacattgatattctggtagaaaaacgtgcgctgagtaataccaaagtgcagattCGGGATACCGGCATTGGTATTCCTGAACGCGATCAATCGCGCTTATTCCAGGcc > 1:12328‑M2/98‑151 (MQ=255) taacctggtggggaatgcaattaaattcaccgagaatggcaacattgatattctggtagaaaaacgtgcgctgagtaataccaaagtgcagattCGGGATACCGGCATTGGTATTCCTGAACGCGATCAATCGCGCTTATTCCAGGCCTTc > 1:613373‑M2/95‑151 (MQ=255) ggtggggaatgcaattaaattcaccgagaatggcaacattgatattctggtagaaaaacgtgcgctgagtaataccaaagtgcagattCGGGATACCGGCATTGGTATTCCTGAACGCGATCAATCGCGCTTATTCCAGGCCTTCCGAc > 1:159445‑M2/89‑149 (MQ=255) gtggggaatgcaattaaattcaccgagaatggcaacattgatattctggtagaaaaacgtgcgctgagtaataccaaagtgcagattCGGGATACCGGCATTGGTATTCCTGAACGCGATCAATCGCGCTTATTCCAGGCCTTCCGACAgg > 2:568040‑M2/88‑151 (MQ=255) ggaatgcaattaaattcaccgagaatggcaacattgatattctggtagaaaaacgtgcgctgagtaataccaaagtgcagattCGGGATACCGGCATTGGTATTCCTGAACGCGATCAATCGCGCTTATTCCAGGCCTTCCGACAGGCTg > 1:901097‑M2/84‑150 (MQ=255) aattaaattcaccgagaatggcaacattgatattctggtagaaaaacgtgcgctgagtaataccaaagtgcagattCGGGATACCGGCATTGGTATTCCTGAACGCGATCAATCGCGCTTATTCCAGGCCTTCCGACAGGCTGATGCCAGt < 1:431898‑M2/75‑1 (MQ=255) attaaattcaccgagaatggcaacattgatattctggtagaaaaacgtgcgctgagtaataccaaagtgcagattCGGGATACCGGCATTGGTATTCCTGAACGCGATCAATCGCGCTTATTCCAGGCCTTCCGACAGGCTGATGCCAGt > 2:871628‑M2/76‑150 (MQ=255) aaattcaccgagaatggcaacattgatattctggtagaaaaacgtgcgctgagtaataccaaagtgcagattCGGGATACCGGCATTGGTATTCCTGAACGCGATCAATCGCGCTTATTCCAGGCCTTCCGACAGGCTGATGCCAGTAtt < 1:936711‑M2/78‑1 (MQ=255) aattcaccgagaatggcaacattgatattctggtagaaaaacgtgcgctgagtaataccaaagtgcagattCGGGATACCGGCATTGGTATTCCTGAACGCGATCAATCGCGCTTATTCCAGGCCTTCCGACAGGCTGATGCCAGTATTTc > 1:379515‑M2/72‑151 (MQ=255) tcaccgagaatggcaacattgatattctggtagaaaaacgtgcgctgagtaataccaaagtgcagattCGGGATACCGGCATTGGTATTCCTGAACGCGATCAATCGCGCTTATTCCAGGCCTTCCGACAGGCTGATGCCAGTATTTccc < 1:537310‑M2/82‑1 (MQ=255) caccgagaatggcaacattgatattctggtagaaaaacgtgcgctgagtaataccaaagtgcagattCGGGATACCGGCATTGGTATTCCTGAACGCGATCAATCGCGCTTATTCCAGGCCTTCCGACAGGCTGATGCCAGTATTTCccgc > 1:428654‑M2/68‑151 (MQ=255) accgagaatggcaacattgatattctggtagaaaaacgtgcgctgagtaataccaaagtgcagattCGGGATACCGGCATTGGTATTCCTGAACGCGATCAATCGCGCTTATTCCAGGCCTTCCGACAGGCTGATGCCAGTATTTCccgcc > 1:222866‑M2/67‑151 (MQ=255) cgagaatggcaacattgatattctggtagaaaaacgtgcgctgagtaataccaaagtgcagattCGGGATACCGGCATTGGTATTCCTGAACGCGATCAATCGCGCTTATTCCAGGCCTTCCGACAGGCTGATGCCAGTATTTCCCGCCGt > 1:96540‑M2/65‑151 (MQ=255) cgagaatggcaacattgatattctggtaaaaaaacgtgcgctgagtaataccaaagtgcagattCGGGATCCCGGCATTGGTATTCCTGAACGCGATCAATCGCGCTTATTCCAGGCCTTCCGACAGGCTGATGCCAGTATTTCCCGCCGt < 2:518120‑M2/87‑1 (MQ=255) gagaatggcaacattgatattctggtagaaaaacgtgcgctgagtaataccaaagtgcagattCGGGATACCGGCATTGGTATTCCTGAACGCGATCAATCGCGCTTATTCCAGGCCTTCCGACAGGCTGATGCCAGTATTTCCCGCCGTc > 1:96267‑M2/64‑151 (MQ=255) agaatggcaacattgatattctggtagaaaaacgtgcgctgagtaataccaaagtgcagattCGGGATACCGGCATTGGTATTCCTGAACGCGATCAATCGCGCTTATTCCAGGCCTTCCGACAGGCTGATGCCAGTATTTCCCGCCGTc > 2:382821‑M2/63‑150 (MQ=255) tggcaacattgatattctggtagaaaaacgtgcgctgagtaataccaaagtgcagattCGGGATACCGGCATTGGTATTCCTGAACGCGATCAATCGCGCTTATTCCAGGCCTTCCGACAGGCTGATGCCAGTATTTCCCGCCGTCAtggt > 1:846274‑M2/59‑151 (MQ=255) gcaacattgatattctggtagaaaaacgtgcgctgagtaataccaaagtgcagattCGGGATACCGGCATTGGTATTCCTGAACGCGATCAATCGCGCTTATTCCAGGCCTTCCGACAGGCTGATGCCAGTATTTCCCGCCGTCAtggtgg < 2:827252‑M2/95‑1 (MQ=255) gcaacattgatattctggtagaaaaacgtgcgctgagtaataccaaagtgcagattCGGGATACCGGCATTGGTATTCCTGAACGCGATCAATCGCGCTTATTCCAGGCCTTCCGACAGGCTGATGCCAGTATTTCCCGCCGTCAtggtgg > 2:435519‑M2/57‑151 (MQ=255) acattgatattctggtagaaaaacgtgcgctgagtaataccaaagtgcagattCGGGATACCGGCATTGGTATTCCTGAACGCGATCAATCGCGCTTATTCCAGGCCTTCCGACAGGCTGATGCCAGTATTTCCCGCCGTCATGGTGGCAc > 1:65828‑M2/54‑151 (MQ=255) tgatattctggtagaaaaacgtgcgctgagtaataccaaagtgcagattCGGGATACCGGCATTGGTATTCCTGAACGCGATCAATCGCGCTTATTCCAGGCCTTCCGACAGGCTGATGCCAGTATTTCCCGCCGTCATGGTGGCACCggg > 1:1023893‑M2/50‑151 (MQ=255) tctggtagaaaaacgtgcgctgagtaataccaaagtgcagattCGGGATACCGGCATTGGTATTCCTGAACGCGATCAATCGCGCTTATTCCAGGCCTTCCGACAGGCTGATGCCAGTATTTCCCGCCGTCATGGTGGCACCgggctgggg > 2:829015‑M2/44‑151 (MQ=255) tctggtagaaaaacgtgcgctgagtaataccaaagtgcagattCGGGATACCGGCATTGGTATTCCTGAACGCGATCAATCGCGCTTATTCCAGGCCTTCCGACAGGCTGATGCCAGTATTTCCCGCCGTCATGGTGGCACCgggctggg < 2:421562‑M2/107‑1 (MQ=255) tggtagaaaaacgtgcgctgagtaataccaaagtgcagattCGGGATACCGGCATTGGTATTCCTGAACGCGATCAATCGCGCTTATTCCAGGCCTTCCGACAGGCTGATGCCAGTATTTCCCGCCGTCATGGTGGCACCgggctggggc > 2:908078‑M2/42‑150 (MQ=255) agaaaaacgtgcgctgagtaataccaaagtgcagattCGGGATACCGGCATTGGTATTCCTGAACGCGATCAATCGCGCTTATTCCAGGCCTTCCGACAGGCTGATGCCAGTATTTCCCGCCGTCATGGTGGCACCGGGCTGGGGCTGGt < 2:686003‑M2/113‑1 (MQ=255) aaacgtgcgctgagtaataccaaagggcagattCGGGATACCGGCATTGGTATTCCTGAACGCGATCAATCGCGCTTATTCCAGGCCTTCCGACAGGCTGAGGCCAGTATTTCCCGCCGTCATGGTGGCACCGGGCTGGGGCTGGTGATTa < 1:168061‑M2/118‑1 (MQ=255) cgtgcgctgagtaataccaaagtgcagattCGGGATACCGGCATTGGTATTCCTGAACGCGATCAATCGCGCTTATTCCAGGCCTTCCGACAGGCTGATGCCAGTATTTCCCGCCGTCATGGTGGCACCGGGCTGGGGCTGGTGATTacac > 2:469338‑M2/31‑151 (MQ=255) cgctgagtaataccaaagtgcagattCGGGATACCGGCATTGGTATTCCTGAACGCGATCAATCGCGCTTATTCCAGGCCTTCCGACAGGCTGATGCCAGTATTTCCCGCCGTCATGGTGGCACCGGGCTGGGGCTGGTGATTACACaaaa < 1:85340‑M2/125‑1 (MQ=255) gagtaataccaaagtgcagattCGGGATACCGGCATTGGTATTCCTGAACGCGATCAATCGCGCTTATTCCAGGCCTTCCGACAGGCTGATGCCAGTATTTCCCGCCGTCATGGTGGCACCGGGCTGGGGCTGGTGATTACACAAAAAc < 1:470950‑M2/127‑1 (MQ=255) gagtaataccaaagtgcagattCGGGATACCGGCATTGGTATTCCTGAACGCGATCAATCGCGCTTATTCCAGGCCTTCCGACAGGCTGATGCCAGTATTTCCCGCCGTCATGGTGGCACCGGGCTGGGGCTGGTGATTACACAAAAAc < 2:220322‑M2/127‑1 (MQ=255) accaaagtgcagattCGGGATACCGGCATTGGTATTCCTGAACGCGATCAATCGCGCTTATTCCAGGCCTTCCGACAGGCTGATGCCAGTATTTCCCGCCGTCATGGTGGCACCGGGCTGGGGCTGGTGATTACACAAAAACTGGTTAATg < 2:585955‑M2/136‑1 (MQ=255) caaagtgcagattCGGGATACCGGCATTGGTATTCCTGAACGCGATCAATCGCGCTTATTCCAGGCCTTCCGACAGGCTGATGCCAGTATTTCCCGCCGTCATGGTGGCACCGGGCTGGGGCTGGTGATTACACAAAAACTGGTTAATGa > 2:652215‑M2/14‑150 (MQ=255) aaagtgcagattCGGGATACCGGCATTGGTATTCCTGAACGCGATCAATCGCGCTTATTCCAGGCCTTCCGACAGGCTGATGCCAGTATTTCCCGCCGTCATGGTGGCACCGGGCTGGGGCTGGTGATTACACAAAAACTGGTTAATGaaa < 2:222457‑M2/139‑1 (MQ=255) gcagattCGGGATACCGGCATTGGTATTCCTGAACGCGATCAATCGCGCTTATTCCAGGCCTTCCGACAGGCTGATGCCAGTATTTCCCGCCGTCATGGTGGCACCGGGCTGGGGCTGGTGATTACACAAAAACTGGTTAATGAAATggg > 1:648267‑M2/8‑150 (MQ=255) | GATAACGTGATCGGCGACCCGCTGCGATTACAGCAAATCATCACTAACCTGGTGGGGAATGCAATTAAATTCACCGAGAATGGCAACATTGATATTCTGGTAGAAAAACGTGCGCTGAGTAATACCAAAGTGCAGATTGAAGTGCAGATTCGGGATACCGGCATTGGTATTCCTGAACGCGATCAATCGCGCTTATTCCAGGCCTTCCGACAGGCTGATGCCAGTATTTCCCGCCGTCATGGTGGCACCGGGCTGGGGCTGGTGATTACACAAAAACTGGTTAATGAAATGGG > NC_000913/2916254‑2916546 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |