Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 1,472,662 IS5 (–) +4 bp pseudogene (2146‑2149/3497 nt) ydbA → pseudogene, autotransporter homolog; interrupted by IS2 and IS30

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1472662 =1 (0.010)85 (1.180) 51/298 0.8 98.8% pseudogene (2146/3497 nt) ydbA pseudogene, autotransporter homolog; interrupted by IS2 and IS30
?NC_000913 = 2290113 NA (NA)noncoding (1/1195 nt) IS5 repeat region
* ? NC_000913 = 14726651 (0.010)70 (0.970) 52/298 0.7 98.6% pseudogene (2149/3497 nt) ydbA pseudogene, autotransporter homolog; interrupted by IS2 and IS30
?NC_000913 2101749 = NA (NA)noncoding (1195/1195 nt) IS5 repeat region

Only 100 of 144 total aligned reads displayed.

GGTGATTGCCGATGGGGTTACGGGTTCTGGACTGATCAAGCAGGGCGACAGCATCAATGTTGAAGGTATGAACGGTAACAACGGTAATAGCAGCGAAGTGCATTATGGCGACTATACGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACAACCTCAACGGCTATGTCGTCGGTACCAACGTTAACGGCAGCGCCGGGAAGCTGAAGGTTAACAATGCCAGCATGAACGGCGTGGAGATTAACACGGGCTTTACCGCTGG  >  NC_000913/1472516‑1472815
                                                                                                                                                     |                                                                                                                                                      
ggtgATTGCCGATGGGGTTACGGGTTCTGGACTGATCAAGCAGGGCGACAGCATCAATGTTGAAGGTATGAACGGTAACAACGGTAATAGCAGCGAAGTGCATTATGGCGACTATACGTTGCCGGATGTGCCGAAGCCCAATACGGTTAg                                                                                                                                                        <  1:89602/150‑1 (MQ=255)
ggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAgt                                                                                                                                                       >  2:954945‑M1/147‑151 (MQ=255)
ggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAgt                                                                                                                                                       >  1:49540‑M1/147‑151 (MQ=255)
 gacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAgtg                                                                                                                                                      >  1:805817‑M1/146‑151 (MQ=255)
 gacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAgtg                                                                                                                                                      <  1:606366‑M1/6‑1 (MQ=255)
   gATTGCCGATGGGGTTACGGGTTCTGGACTGATCAAGCAGGGCGACAGCATCAATGTTGAAGGTATGAACGGTAACAACGGTAATAGCAGCGAAGTGCATTATGGCGACTATACGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGgga                                                                                                                                                     <  2:137801‑M1/150‑4 (MQ=255)
   gATTGCCGATGGGGTTACGGGTTCTGGACTGATCAAGCAGGGCGACAGCATCAATGTTGAAGGTATGAACGGTAACAACGGTAATAGCAGCGAAGTGCATTATGGCGACTATACGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGgga                                                                                                                                                     <  2:245817‑M1/150‑4 (MQ=255)
   caagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAgtgt                                                                                                                                                     <  2:378497‑M1/7‑1 (MQ=255)
    aTTGCCGATGGGGTTACGGGTTCTGGACTGATCAAGCAGGGCGACAGCATCAATGTTGAAGGTATGAACGGTAACAACGGTAATAGCAGCGAAGTGCATTATGGCGACTATACGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGggaag                                                                                                                                                   <  2:35203‑M1/151‑6 (MQ=255)
    aTTGCCGATGGGGTTACGGGTTCTGGACTGATCAAGCAGGGCGACAGCATCAATGTTGAAGGTATGAACGGTAACAACGGTAATAGCAGCGAAGTGCATTATGGCGACTATACGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGggaag                                                                                                                                                   <  2:58639‑M1/151‑6 (MQ=255)
    aTTGCCGATGGGGTTACGGGTTCTGGACTGATCAAGCAGGGCGACAGCATCAATGTTGAAGGTATGAACGGTAACAACGGTAATAGCAGCGAAGTGCATTATGGCGACTATACGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGTGTaa                                                                                                                                                   <  1:1091234/151‑1 (MQ=255)
      tGCCGATGGGGTTACGGGTTCTGGACTGATCAAGCAGGGCGACAGCATCAATGTTGAAGGTATGAACGGTAACAACGGTAATAGCAGCGAAGTGCATTATGGCGACTATACGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGggaaggt                                                                                                                                                 >  2:490313‑M1/1‑144 (MQ=255)
       gCCGATGGGGTTACGGGTTCTGGACTGATCAAGCAGGGCGACAGCATCAATGTTGAAGGTATGAACGGTAACAACGGTAATAGCAGCGAAGTGCATTATGGCGACTATACGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGggaaggt                                                                                                                                                 <  2:896124‑M1/150‑8 (MQ=255)
       aaaatcgctttgctggtctgacggcgcttactgctgaattcgctgtcggcgaaggtaagttgatcgctcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAgtg                                                                                                                                                      >  1:423439‑M1/140‑145 (MQ=255)
            ctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGTAACGTCggg                                                                                                                                            <  2:665997‑M1/16‑1 (MQ=255)
              gggTTACGGGTTCTGGACTGATCAAGCAGGGCGACAGCATCAATGTTGAAGGTATGAACGGTAACAACGGTAATAGCAGCGAAGTGCATTATGGCGACTATACGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGggaaggtgcgaat                                                                                                                                           <  2:230743‑M1/149‑14 (MQ=255)
                 ttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGTAACGTCGGGAAGtg                                                                                                                                       <  2:519909‑M1/21‑1 (MQ=255)
                  tctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGTAACGTCGGGAAGtgat                                                                                                                                     <  1:1096512‑M1/23‑1 (MQ=255)
                   aCGGGTTCTGGACTGATCAAGCAGGGCGACAGCATCAATGTTGAAGGTATGAACGGTAACAACGGTAATAGCAGCGAAGTGCATTATGGCGACTATACGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGggaaggtgcgaataagcggg                                                                                                                                    <  2:432862‑M1/151‑21 (MQ=255)
                     ggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGTAACGTCGGGAAGTGATGAg                                                                                                                                  >  2:791553‑M1/126‑151 (MQ=255)
                            ggACTGATCAAGCAGGGCGACAGCATCAATGTTGAAGGTATGAACGGTAACAACGGTAATAGCAGCGAAGTGCATTATGGCGACTATACGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGggaaggtgcgaataagcggggaaattc                                                                                                                             <  1:547310‑M1/149‑28 (MQ=255)
                                gcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGgc                                                                                                                         <  2:790184‑M1/35‑1 (MQ=255)
                                 gATCAAGCAGGGCGACAGCATCAATGTTGAAGGTATGAACGGTAACAACGGTAATAGCAGCGAAGTGCATTATGGCGACTATACGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGggaaggtgcgaataagcggggaaattcttctcg                                                                                                                       <  1:1061634‑M1/150‑34 (MQ=255)
                                    cAAGCAGGGCGACAGCATCAATGTTGAAGGTATGAACGGTAACAACGGTAATAGCAGCGAAGTGCATTATGGCGACTATACGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGggaaggtgcgaataagcggggaaattcttctcggctg                                                                                                                   <  2:1087333‑M1/151‑38 (MQ=255)
                                       gctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGaac                                                                                                                >  2:978668‑M1/108‑151 (MQ=255)
                                       gctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGaa                                                                                                                 <  1:975231‑M1/43‑1 (MQ=255)
                                       gctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGa                                                                                                                  >  2:69197‑M1/108‑149 (MQ=255)
                                       gctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGa                                                                                                                  >  2:544137‑M1/108‑149 (MQ=255)
                                       gctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGa                                                                                                                  >  2:269250‑M1/108‑149 (MQ=255)
                                            gCGACAGCATCAATGTTGAAGGTATGAACGGTAACAACGGTAATAGCAGCGAAGTGCATTATGGCGACTATACGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtc                                                                                                           <  1:271801‑M1/151‑46 (MQ=255)
                                             ttcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACAACCTc                                                                                                          <  1:174226‑M1/50‑1 (MQ=255)
                                               cactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACAACCTCa                                                                                                         >  1:808375‑M1/100‑150 (MQ=255)
                                               cactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACAACCTCa                                                                                                         >  1:1118045‑M1/100‑150 (MQ=255)
                                               aCAGCATCAATGTTGAAGGTATGAACGGTAACAACGGTAATAGCAGCGAAGTGCATTATGGCGACTATACGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatt                                                                                                        <  2:497120‑M1/151‑49 (MQ=255)
                                                  tgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACAACCTCAACgg                                                                                                     <  2:305279‑M1/55‑1 (MQ=255)
                                                    aTCAATGTTGAAGGTATGAACGGTAACAACGGTAATAGCAGCGAAGTGCATTATGGCGACTATACGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatt                                                                                                   <  2:720357‑M1/151‑54 (MQ=255)
                                                      ggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACAACCTCAACGGCTAt                                                                                                 >  1:978801‑M1/93‑151 (MQ=255)
                                                        aTGTTGAAGGTATGAACGGTAACAACGGTAATAGCAGCGAAGTGCATTATGGCGACTATACGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttctt                                                                                               <  1:1021742‑M1/151‑58 (MQ=255)
                                                         gaaggtaagttgatgactcatgatgacccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcgccttccTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACAACCTCAACGGCTATgtc                                                                                              >  2:334982‑M1/90‑151 (MQ=255)
                                                           aggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACAACCTCAACGGCTATgtcgt                                                                                            >  2:312673‑M1/88‑151 (MQ=255)
                                                            ggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACAACCTCAACGGCTATgtcgtc                                                                                           >  2:804137‑M1/87‑151 (MQ=255)
                                                               aagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACAACCTCAACGGCTATGTCGTCgg                                                                                         >  1:32441‑M1/84‑150 (MQ=255)
                                                                     gAACGGTAACAACGGTAATAGCAGCGAAGTGCATTATGGCGACTATACGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccg                                                                                  >  1:473502‑M1/1‑81 (MQ=255)
                                                                       gactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACAACCTCAACGGCTATGTCGTCGGTACCAACGt                                                                                >  2:523075‑M1/76‑151 (MQ=255)
                                                                       gactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACAACCTCAACGGCTATGTCGTCGGTACCAACGt                                                                                <  1:1020682‑M1/76‑1 (MQ=255)
                                                                       aCGGTAACAACGGTAATAGCAGCGAAGTGCATTATGGCGACTATACGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgat                                                                                >  2:498707‑M1/1‑79 (MQ=255)
                                                                        actcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACAACCTCAACGGCTATGTCGTCGGTACCAACGtt                                                                               <  2:257155‑M1/77‑1 (MQ=255)
                                                                         ctcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACAACCTCAACGGCTATGTCGTCGGTACCAACGtt                                                                               <  1:483615‑M1/77‑1 (MQ=255)
                                                                          gTAACAACGGTAATAGCAGCGAAGTGCATTATGGCGACTATACGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatttt                                                                             >  1:631966‑M1/1‑76 (MQ=255)
                                                                            aacaacGGTAATAGCAGCGAAGTGCATTATGGCGACTATACGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatttttt                                                                           >  1:389219‑M1/1‑74 (MQ=255)
                                                                             acaacGGTAATAGCAGCGAAGTGCATTATGGCGACTATACGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttc                                                                          <  1:177070‑M1/151‑79 (MQ=255)
                                                                                 gaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACAACCTCAACGGCTATGTCGTCGGTACCAACGTTAACGGCAgc                                                                      <  2:261165‑M1/86‑1 (MQ=255)
                                                                                    tAATAGCAGCGAAGTGCATTATGGCGACTATACGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgt                                                                    >  1:138752‑M1/1‑66 (MQ=255)
                                                                                    ccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACAACCTCAACGGCTATGTCGTCGGTACCAACGTTAACGGAAGCGcc                                                                   <  1:158313‑M1/89‑1 (MQ=255)
                                                                                        gttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACAACCTCAACGGCTATGTCGTCGGTACCAACGTTAACGGCAGCGCCgg                                                                 >  2:202191‑M1/59‑149 (MQ=255)
                                                                                          cagcGAAGTGCATTATGGCGACTATACGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGggaaggtgcgaatacgcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgc                                                              >  1:724048‑M1/1‑60 (MQ=255)
                                                                                             atggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACAACCTCAACGGCTATGTCGTCGGTACCAACGTTAACGGCAGCGCCGGGAAGCTg                                                          <  1:333040‑M1/98‑1 (MQ=255)
                                                                                                    cagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACAACCTCAACGGCTATGTCGTCGGTACCAACGTTAACGGCAGCGCCGGGAAGCTGAAGGTTa                                                   >  2:183827‑M1/47‑151 (MQ=255)
                                                                                                    cATTATGGCGACTATACGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagc                                                   <  1:43609‑M1/151‑102 (MQ=255)
                                                                                                     agatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACAACCTCAACGGCTATGTCGTCGGTACCAACGTTAACGGCAGCGCCGGGAAGCTGAAGGTTaa                                                  >  2:281474‑M1/46‑151 (MQ=255)
                                                                                                     agatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACAACCTCAACGGCTATGTCGTCGGTACCAACGTTAACGGCAGCGCCGGGAAGCTGAAGGTTa                                                   <  2:720869‑M1/105‑1 (MQ=255)
                                                                                                     aTTATGGCGACTATACGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcc                                                  <  1:800296‑M1/151‑103 (MQ=255)
                                                                                                      gatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACAACCTCAACGGCTATGTCGTCGGTACCAACGTTAACGGCAGCGCCGGGAAGCTGAAGGTTAAc                                                 >  2:817147‑M1/45‑151 (MQ=255)
                                                                                                       atgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACAACCTCAACGGCTATGTCGTCGGTACCAACGTTAACGGCAGCGCCGGGAAGCTGAAGGTTAACa                                                >  2:579765‑M1/44‑151 (MQ=255)
                                                                                                        aTGGCGACTATACGTTGCCGGATGTGCCGAAGCCCAATACGGGTAGggaaggtgcgaataagcggggaaattcttctcggctgactcggtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccgtgaatcagcctat                                               >  1:576625‑M1/1‑46 (MQ=255)
                                                                                                           caaacatgatctcatatcagggacttgttcgcaccttccTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACAACCTCAACGGCTATGTCGTCGGTACCAACGTTAACGGCAGCGCCGGGAAGCTGAAGGTTAACAATGc                                            >  2:291217‑M1/40‑151 (MQ=255)
                                                                                                             gACTATACGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctattt                                             >  2:874526‑M1/1‑41 (MQ=255)
                                                                                                              aCTATACGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagac                                         <  1:105757‑M1/151‑112 (MQ=255)
                                                                                                               cTATACGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagacc                                        >  1:202426‑M1/1‑39 (MQ=255)
                                                                                                                  gatctcatatcagggacttgttcgcaccttccTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACAACCTCAACGGCTATGTCGTCGGTACCAACGTTAACGGCAGCGCCGGGAAGCTGAAGGTTAACAATGCCAGCAt                                      >  2:610685‑M1/33‑150 (MQ=255)
                                                                                                                   aCGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgttt                                    >  1:853575‑M1/1‑35 (MQ=255)
                                                                                                                    cGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttc                                   <  2:1048102‑M1/151‑118 (MQ=255)
                                                                                                                    cGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgttt                                    >  1:45822‑M1/1‑34 (MQ=255)
                                                                                                                       catatcagggacttgttcgcaccttccTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACAACCTCAACGGCTATGTCGTCGGTACCAACGTTAACGGCAGCGCCGGGAAGCTGAAGGTTAACAATGCCAGCATGAACgg                                >  2:131500‑M1/28‑151 (MQ=255)
                                                                                                                        atatcagggacttgttcgcaccttccTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACAACCTCAACGGCTATGTCGTCGGTACCAACGTTAACGGCAGCGCCGGGAAGCTGAAGGTTAACAATGCCAGCATGAACGGc                               >  1:721292‑M1/27‑151 (MQ=255)
                                                                                                                         tatcagggacttgttcgcaccttccTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACAACCTCAACGGCTATGTCGTCGGTACCAACGTTAACGGCAGCGCCGGGAAGCTGAAGGTTAACAATGCCAGCATGAACGGCg                              <  1:1071692‑M1/126‑1 (MQ=255)
                                                                                                                          cGGATGTGCCGAAGCCCAATACGGTTAGggaaggcgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgcc                             >  1:515929‑M1/1‑28 (MQ=255)
                                                                                                                          atcagggacttgttcgcaccttccTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACAACCTCAACGGCTATGTCGTCGGTACCAACGTTAACGGCAGCGCCGGGAAGCTGAAGGTTAACAATGCCAGCATGAACGGCGt                             <  2:1017926‑M1/127‑1 (MQ=255)
                                                                                                                             aTGTGCCGAAGCCCAATACGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatt                          <  1:154051‑M1/151‑127 (MQ=255)
                                                                                                                             aTGTGCCGAAGCCCAATACGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatt                          <  2:468250‑M1/151‑127 (MQ=255)
                                                                                                                               gtgCCGAAGCCCAATACGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccattta                        <  1:1074917‑M1/151‑129 (MQ=255)
                                                                                                                                   ttgttcgcaccttccTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACAACCTCAACGGCTATGTCGTCGGTACCAACGTTAACGGCAGCGCCGGGAAGCTGAAGGTTAACAATGCCAGCATGAACGGCGTGGGGAtt                      <  1:11910‑M1/134‑1 (MQ=255)
                                                                                                                                    tgttcgcaccttccTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACAACCTCAACGGCTATGTCGTCGGTACCAACGTTAACGGCAGCGCCGGGAAGCTGAAGGTTAACAATGCCAGCATGAACGGCGTGGAGATTaa                    >  2:436892‑M1/15‑150 (MQ=255)
                                                                                                                                    gAAGCCCAATACGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcg                   >  1:227686‑M1/1‑18 (MQ=255)
                                                                                                                                      aGCCCAATACGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgtt                 <  2:743773‑M1/151‑136 (MQ=255)
                                                                                                                                               tccTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACAACCTCAACGGCTATGTCGTCGGTACCAACGTTAACGGCAGCGCCGGGAAGCTGAAGGTTAACAATGCCAGCATGAACGGCGTGGAGATTAACACGGGCttt          >  1:716323‑M1/4‑149 (MQ=255)
                                                                                                                                               cGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcattcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagt        <  1:917626‑M1/151‑145 (MQ=255)
                                                                                                                                                ccTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACAACCTCAACGGCTATGTCGTCGGTACCAACGTTAACGGCAGCGCCGGGAAGCTGAAGGTTAACAATGCCAGCATGAACGGCGTGGAGATTAACACGGGCTTTAc        >  2:483250‑M1/3‑150 (MQ=255)
                                                                                                                                                 gTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttt      <  2:532530‑M1/151‑147 (MQ=255)
                                                                                                                                                 gTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttt      >  2:213022‑M1/1‑5 (MQ=255)
                                                                                                                                                 gTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttt      <  2:351622‑M1/151‑147 (MQ=255)
                                                                                                                                                  ttAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttt     >  1:1003600‑M1/1‑4 (MQ=255)
                                                                                                                                                  ttAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttt     >  1:443440‑M1/1‑4 (MQ=255)
                                                                                                                                                  ttAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtt       <  2:371412‑M1/149‑146 (MQ=255)
                                                                                                                                                   tAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACAACCTCAACGGCTATGTCGTCGGTACCAACGTTAACGGCAGCGCCGGGAAGCTGAAGGTTAACAATGCCAGCATGAACGGCGTGGAGATTAACACGGGCTTTACCGCt    >  2:1045543/1‑151 (MQ=255)
                                                                                                                                                    ggggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttttt    >  1:757865‑M1/2‑2 (MQ=255)
                                                                                                                                                    aGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACAACCTCAACGGCTATGTCGTCGGTACCAACGTTAACGGCAGCGCCGGGAAGCTGAAGGTTAACAATGCCAGCATGAACGGCGTGGAGATTAACACGGGCTTTACCGCTg   <  1:87274/151‑1 (MQ=255)
                                                                                                                                                     gtgtAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACAACCTCAACGGCTATGTCGTCGGTACCAACGTTAACGGCAGCGCCGGGAAGCTGAAGGTTAACAATGCCAGCATGAACGGCGTGGAGATTAACACGGGCTTTACCGCTgg  >  1:593328/1‑151 (MQ=255)
                                                                                                                                                     gggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttag  <  1:199406‑M1/151‑151 (MQ=255)
                                                                                                                                                     gggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttttt    >  1:194445‑M1/1‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                      
GGTGATTGCCGATGGGGTTACGGGTTCTGGACTGATCAAGCAGGGCGACAGCATCAATGTTGAAGGTATGAACGGTAACAACGGTAATAGCAGCGAAGTGCATTATGGCGACTATACGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACAACCTCAACGGCTATGTCGTCGGTACCAACGTTAACGGCAGCGCCGGGAAGCTGAAGGTTAACAATGCCAGCATGAACGGCGTGGAGATTAACACGGGCTTTACCGCTGG  >  NC_000913/1472516‑1472815

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.