Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 2,469,636 IS5 (+) +4 bp coding (506‑509/1332 nt) gtrS → serotype‑specific glucosyl transferase, CPS‑53 (KpLE1) prophage

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2102943NA (NA)91 (1.130) 75/296 0.1 100% noncoding (1/1195 nt) IS5 repeat region
?NC_000913 = 2469639 0 (0.000)coding (509/1332 nt) gtrS serotype‑specific glucosyl transferase, CPS‑53 (KpLE1) prophage
* ? NC_000913 2288919 =NA (NA)70 (0.860) 60/298 0.6 100% noncoding (1195/1195 nt) IS5 repeat region
?NC_000913 2469636 = 0 (0.000)coding (506/1332 nt) gtrS serotype‑specific glucosyl transferase, CPS‑53 (KpLE1) prophage

Only 100 of 160 total aligned reads displayed.

ATGTAACTTTATTTACATTCTTTATTTTAGCTTTTCTTATGTGTTCTTCATCAACACTGTCAATGTTTGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCATATTATATTTTTTTTGATAGACACAAACTAATTATTAAATCTGTAATATGCGTGGTGTGCTTGCT  >  NC_000913/2469489‑2469783
                                                                                                                                                   |                                                                                                                                                   
aTGTAACTTTATTTACATTCTTTATTTTAGCTTTTCTTATGTGTTCTTCATCAACACTGTCAATGTTTGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTAt                                                                                                                                                  <  2:393267/151‑1 (MQ=255)
 tGTAACTTTATTTACATTCTTTATTTTAGCTTTTCTTATGTGTTCTTCATCAACACTGTCAATGTTTGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATg                                                                                                                                                 <  2:932152‑M2/151‑2 (MQ=255)
     aCTTTATTTACATTCTTTATTTTAGCTTTTCTTATGTGTTCTTCATCAACACTGTCAATGTTTGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATggaag                                                                                                                                             >  1:172574‑M2/1‑146 (MQ=255)
      cTTTATTTACATTCTTTATTTTAGCTTTTCTTATGTGTTCTTCATCAACACTGTCAATGTTTGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATggaag                                                                                                                                             <  1:230687‑M2/150‑6 (MQ=255)
        ttatttaCATTCTTTATTTTAGCTTTTCTTATGTGTTCTTCATCAACACTGTCAATGTTTGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATggaaggtg                                                                                                                                          <  1:1287440‑M2/151‑9 (MQ=255)
        ttatttaCATTCTTTATTTTAGCTTTTCTTATGTGTTCTTCATCAACACTGTCAATGTTTGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATggaaggtg                                                                                                                                          <  1:1304475‑M2/151‑9 (MQ=255)
        ttatttaCATTCTTTATTTTAGCTTTTCTTATGTGTTCTTCATCAACACTGTCAATGTTTGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATggaagg                                                                                                                                            >  1:121079‑M2/1‑143 (MQ=255)
             taCATTCTTTATTTTAGCTTTTCTTATGTGTTCTTCATCAACACTGTCAATGTTTGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATggaaggtgcgaac                                                                                                                                     <  1:785928‑M2/151‑14 (MQ=255)
                   taaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTATGCTTTTGCTATTTTTTTc                                                                                                                                <  1:869308‑M2/22‑1 (MQ=255)
                     aatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTATGCTTTTGCTATTTTTTTCGtt                                                                                                                             <  2:897518‑M2/25‑1 (MQ=255)
                      atggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTATGCTTTTGCTATTTTTTTCGtt                                                                                                                             >  2:1040123‑M2/126‑150 (MQ=255)
                         tttAGCTTTTCTTATGTGTTCTTCATCAACACTGTCAATGTTTGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATggaaggtgcgaacaagtccctgat                                                                                                                          >  2:733572‑M2/1‑126 (MQ=255)
                         gcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTATGCTTTTGCTATTTTTTTCGTTGCta                                                                                                                         <  2:942649‑M2/29‑1 (MQ=255)
                            aagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTATGCTTTTGCTATTTTTTTCGTTGCtaat                                                                                                                       >  2:1167756‑M2/120‑150 (MQ=255)
                            aGCTTTTCTTATGTGTTCTTCATCAACACTGTCAATGTTTGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATggaaggtgcgaacaagtccctgatatg                                                                                                                       <  1:95284‑M2/150‑28 (MQ=255)
                             gCTTTTCTTATGTGTTCTTCATCAACACTGTCAATGTTTGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATggaaggtgcgaacaagtccctgatatg                                                                                                                       <  2:1241287‑M2/149‑28 (MQ=255)
                             agaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatggagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTATGCTTTTGCTATTTTTTTCGTTGCtaata                                                                                                                      >  2:674893‑M2/119‑150 (MQ=255)
                               aaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTATGCTTTTGCTATTTTTTTCGTTGCTaataat                                                                                                                    <  1:612046‑M2/34‑1 (MQ=255)
                                tttCTTATGTGTTCTTCATCAACACTGTCAGTGTTTGCATCATTCTATCAAGAGCAAATAGTTATGATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATggatggtgctaacaagtccctgat                                                                                                                          <  2:369415‑M2/143‑25 (MQ=255)
                                 ttCTTATGTGTTCTTCATCAACACTGTCAATGTTTGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATggaaggtgcgaacaagtccctgatatgagatc                                                                                                                  >  1:356296‑M2/1‑118 (MQ=255)
                                    ttATGTGTTCTTCATCAACACTGTCAATGTTTGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATggaaggtgcgaacaagtccctgatatgagatcatgt                                                                                                              <  1:212053‑M2/151‑37 (MQ=255)
                                     tATGTGTTCTTCATCAACACTGTCAATGTTTGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATggaaggtgcgaacaagtccctgatatgagatcatgtt                                                                                                             <  2:967432‑M2/151‑38 (MQ=255)
                                      aTGTGTTCTTCATCAACACTGTCAATGTTTGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATggaaggtgcgaacaagtccctgatatgagatcatgttt                                                                                                            >  1:66670‑M2/1‑113 (MQ=255)
                                        gtgtTCTTCATCAACACTGTCAATGTTTGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATggaaggtgcgaacaagtccctgatatgagatcatgtttgt                                                                                                          <  2:1295187‑M2/151‑41 (MQ=255)
                                         tgtTCTTCATCAACACTGTCAATGTTTGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCGTTTTTGGTGTATTCATTAACATACAAAAACAATAAATCTATggaaggtgcgaacaagtccctgatatgagatcatgtttgtc                                                                                                         <  2:611336‑M2/151‑42 (MQ=255)
                                         aataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgccccttccCTATGCTTTTGCTAGTTTTTTCGTTGCTAATAATATCTACagcaa                                                                                                         <  2:1183791‑M2/45‑3 (MQ=255)
                                               ctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATc                                                                                                   >  2:1199820‑M2/101‑151 (MQ=255)
                                                tgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATc                                                                                                   >  1:185980‑M2/100‑150 (MQ=255)
                                                 gattcaatgcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATc                                                                                                   <  2:284874‑M2/51‑1 (MQ=255)
                                                 atcaACACTGTCAATGTTTGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgga                                                                                                  >  1:369251‑M2/1‑102 (MQ=255)
                                                    tcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAAttt                                                                                              >  2:1136644‑M2/96‑151 (MQ=255)
                                                      aaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTtat                                                                                            <  1:769711‑M2/58‑1 (MQ=255)
                                                         tGTCAATGTTTGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccataga                                                                                          <  1:645199‑M2/150‑57 (MQ=255)
                                                          gTCAATGTTTGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaac                                                                                        >  1:1095173‑M2/1‑93 (MQ=255)
                                                          gTCAATGTTTGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaa                                                                                         >  1:510296‑M2/1‑93 (MQ=255)
                                                           atttacggtagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTaa                                                                                       <  1:100163‑M2/63‑1 (MQ=255)
                                                           atttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTaa                                                                                       <  2:163380‑M2/63‑1 (MQ=255)
                                                              aTGTTTGCATCATTCTATCAAGCGCAAATAGTTGTAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATggcaggtgcgaacaagtctctgatatgagatcatgtttgtcatctggagccatagaacaggg                                                                                    <  2:250494‑M2/151‑63 (MQ=255)
                                                               acgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAAcccc                                                                                   >  2:330383‑M2/85‑151 (MQ=255)
                                                                   gagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACt                                                                                >  2:975113‑M2/81‑150 (MQ=255)
                                                                   gagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTa                                                                               <  2:805057‑M2/71‑1 (MQ=255)
                                                                      atcatTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcat                                                                            <  1:1082974‑M2/151‑71 (MQ=255)
                                                                      aaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATa                                                                            <  1:662881‑M2/74‑1 (MQ=255)
                                                                       aaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcacctaccCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCGCTAATAg                                                                           <  2:206515‑M2/75‑1 (MQ=255)
                                                                        aaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAgt                                                                          <  1:781272‑M2/76‑1 (MQ=255)
                                                                        aaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAgt                                                                          >  1:195591‑M2/76‑151 (MQ=255)
                                                                          aatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAgtgt                                                                        >  2:754201‑M2/74‑151 (MQ=255)
                                                                            cTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtc                                                                       <  1:116917‑M2/150‑76 (MQ=255)
                                                                             tATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcat                                                                     <  2:487989‑M2/151‑78 (MQ=255)
                                                                             cggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTAt                                                                      <  1:1142479‑M2/80‑1 (MQ=255)
                                                                              ggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTc                                                                    <  2:1080435‑M2/82‑1 (MQ=255)
                                                                              aTCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatc                                                                    >  1:1180292‑M2/1‑73 (MQ=255)
                                                                              aTCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtca                                                                      >  1:1268273‑M2/1‑73 (MQ=255)
                                                                               gctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTc                                                                    >  2:1260156‑M2/69‑150 (MQ=255)
                                                                                cAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatca                                                                   >  2:619106‑M2/1‑71 (MQ=255)
                                                                                  caaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCatat                                                                <  1:425556‑M2/86‑1 (MQ=255)
                                                                                  caaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCat                                                                  <  2:1106609‑M2/84‑1 (MQ=255)
                                                                                  caaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCat                                                                  <  1:1296261‑M2/84‑1 (MQ=255)
                                                                                   gagCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATggaaggtgcgaacaagtccctgatatgagataatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactt                                                               <  2:1220033‑M2/151‑84 (MQ=255)
                                                                                   aaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCatatt                                                               <  1:102161‑M2/87‑1 (MQ=255)
                                                                                     gCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttac                                                             >  2:1305186‑M2/1‑66 (MQ=255)
                                                                                      cAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacc                                                            <  2:1053023‑M2/151‑87 (MQ=255)
                                                                                         aTAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAATCTATggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttc                                                         <  1:200769‑M2/150‑90 (MQ=255)
                                                                                           agaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCATATTATAttttt                                                       <  1:760951‑M2/95‑1 (MQ=255)
                                                                                           aGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcg                                                        >  1:1251565‑M2/1‑60 (MQ=255)
                                                                                             aaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCATATTATAttttttt                                                     >  1:1047078‑M2/55‑151 (MQ=255)
                                                                                             aaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCATATTATAttttttt                                                     <  1:433777‑M2/97‑1 (MQ=255)
                                                                                             aaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCATATTATAttttttt                                                     <  2:533515‑M2/97‑1 (MQ=255)
                                                                                             aaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCATATTATAtttttt                                                      <  2:148080‑M2/96‑1 (MQ=255)
                                                                                              aatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCATATTATAtttttttt                                                    <  2:13321‑M2/98‑1 (MQ=255)
                                                                                               ataATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgac                                                   <  2:828505‑M2/151‑96 (MQ=255)
                                                                                                 gaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCATATTATATTTTTTTTGa                                                  <  2:315699‑M2/100‑1 (MQ=255)
                                                                                                 aaTTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaca                                                  >  2:802660‑M2/1‑54 (MQ=255)
                                                                                                  aaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCATATTATATTTTTTTTGATa                                                <  2:10449‑M2/102‑1 (MQ=255)
                                                                                                  aaatgactgagtcagccgagaagaattcccccgcttattcgcaccttccCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCATATTATATTTTTTTTGAt                                                 <  1:1048655‑M2/101‑1 (MQ=255)
                                                                                                  aTTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagt                                                >  2:545777‑M2/1‑53 (MQ=255)
                                                                                                    atgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCATATTATATTTTTTTTGATAGa                                              <  2:1129718‑M2/104‑1 (MQ=255)
                                                                                                      tccttccATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaat                                            <  2:401054‑M2/151‑103 (MQ=255)
                                                                                                          tccATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattc                                          >  1:293354‑M2/1‑45 (MQ=255)
                                                                                                           ccATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcag                                        >  2:109848‑M2/1‑44 (MQ=255)
                                                                                                            cATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagc                                       <  1:520986‑M2/150‑108 (MQ=255)
                                                                                                              cagccgagaagaatttccccgcttattcgcaccttccCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCATATTATATTTTTTTTGATAGACACAAACTaa                                    <  1:809350‑M2/114‑1 (MQ=255)
                                                                                                               agccgagaagaatttccccgcttattcgcaccttccCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCATATTATATTTTTTTTGATAGACACAAACTAat                                   <  1:742891‑M2/115‑1 (MQ=255)
                                                                                                                  cgagaagaatttccccgcttattcgcaccttccCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCATATTATATTTTTTTTGATAGACACAAACTAattat                                >  1:428413‑M2/34‑151 (MQ=255)
                                                                                                                    gtgtATTCATTAACATGCAAAAACAATAAATCTATggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagc                                >  1:625790‑M2/1‑35 (MQ=255)
                                                                                                                       tATTCATTAACATGCAAAAACAATAAATCTATggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgt                           <  1:1327196‑M2/151‑120 (MQ=255)
                                                                                                                          atttccccgcttattcgcaccttccCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCATATTATATTTTTTTTGATAGACACAAACTAATTATTAAATCTg                        <  1:266907‑M2/126‑1 (MQ=255)
                                                                                                                           cATTAACATGCAAAAACAATAAATCTATggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtc                          <  2:1291583‑M2/148‑121 (MQ=255)
                                                                                                                              ccccgcttattcgcaccttccCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCATATTATATTTTTTTTGATAGACACAAACTAATTATTAAATCTGTaa                     <  1:1236503‑M2/129‑1 (MQ=255)
                                                                                                                                aCATGCAAAAACAATAAATCTATggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagacc                     <  2:665342‑M2/148‑126 (MQ=255)
                                                                                                                                aCATGCAAAAACAATAAATCTATggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagacc                     <  1:1328070‑M2/148‑126 (MQ=255)
                                                                                                                                 cgcttattcgcaccttccCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCATATTATATTTTTTTTGATAGACACAAACTAATTATTAAATCTGTAATATg                 <  1:318415‑M2/133‑1 (MQ=255)
                                                                                                                                 cATGCAAAAACAATAAATCTATggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccaga                  <  2:591984‑M2/150‑129 (MQ=255)
                                                                                                                                    ttattcgcaccttccCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCATATTATATTTTTTTTGATAGACACAAACTAATTATTAAATCTGTAATATGCgt              >  2:1054754‑M2/16‑151 (MQ=255)
                                                                                                                                     cAAAAACAATAAATCTATggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaa                <  1:271199‑M2/148‑131 (MQ=255)
                                                                                                                                       aaaaCAATAAATCTATggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagaga           >  2:786289‑M2/1‑16 (MQ=255)
                                                                                                                                        aaaCAATAAATCTATggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaag              <  1:1314881‑M2/147‑133 (MQ=255)
                                                                                                                                            aaTAAATCTATggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttc      >  2:191043‑M2/1‑11 (MQ=255)
                                                                                                                                                aaTCTATggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgt  <  2:456425‑M2/151‑145 (MQ=255)
                                                                                                                                                aaTCTATggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgt  <  1:376598‑M2/151‑145 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
ATGTAACTTTATTTACATTCTTTATTTTAGCTTTTCTTATGTGTTCTTCATCAACACTGTCAATGTTTGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCATATTATATTTTTTTTGATAGACACAAACTAATTATTAAATCTGTAATATGCGTGGTGTGCTTGCT  >  NC_000913/2469489‑2469783

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.