Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 238,963 IS5 (+) +4 bp pseudogene (137‑140/357 nt) yafU ← pseudogene

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 238963 =0 (0.000)85 (1.120) 55/298 0.7 100% pseudogene (140/357 nt) yafU pseudogene
?NC_000913 273955 = NA (NA)noncoding (1195/1195 nt) IS5 repeat region
* ? NC_000913 = 2389660 (0.000)99 (1.300) 74/298 0.1 100% pseudogene (137/357 nt) yafU pseudogene
?NC_000913 = 275149 NA (NA)noncoding (1/1195 nt) IS5 repeat region

Only 100 of 174 total aligned reads displayed.

AGTTCCTGTTGCCGTTTTAGTCCATCTCTAATTGCATATTTTAATTTTTCTGATAAATGGCATTGAGCATCGATTTCATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCCACATCCATTGAAAAATCGCCAAGAAAATTAACCAGATCTCGCTCTGAACTCATAATAAATTCTATGGTTCTGCTGATTT  >  NC_000913/238813‑239110
                                                                                                                                                      |                                                                                                                                                   
ctaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccc                                                                                                                                                     <  1:1105854‑M1/1‑1 (MQ=255)
 gTTCCTGTTGCCGTTTTAGTCCATCTCTAATTGCATATTTTAATTTTTCTGATAAATGGCATTGAGCATCGATTTCATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCt                                                                                                                                                    >  2:607462/1‑151 (MQ=255)
  aaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCt                                                                                                                                                    <  1:49649‑M1/2‑1 (MQ=255)
  aaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCt                                                                                                                                                    >  1:854695‑M1/149‑150 (MQ=255)
  aaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTa                                                                                                                                                   >  1:27859‑M1/149‑151 (MQ=255)
    aaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaataatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAac                                                                                                                                                 <  2:1176688‑M1/5‑1 (MQ=255)
    aaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa                                                                                                                                                  <  2:986274‑M1/4‑1 (MQ=255)
    aaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAac                                                                                                                                                 <  1:712583‑M1/5‑1 (MQ=255)
    aaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttacccgcttattcgcaccttccCTaa                                                                                                                                                  <  2:434799‑M1/4‑1 (MQ=255)
        tggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAacac                                                                                                                                               <  2:4164‑M1/7‑1 (MQ=255)
           ccGTTTTAGTCCATCTCTAATTGCATATTTTAATTTTTCTGATAAATGGCATTGAGCATCGATTTCATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtg                                                                                                                                          <  1:848026‑M1/151‑9 (MQ=255)
             gTTTTAGTCCATCTCTAATTGCATATTTTAATTTTTCTGATAAATGGCATTGAGCATCGATTTCATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcg                                                                                                                                        >  1:1088443‑M1/1‑141 (MQ=255)
              taacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACAGGCaaa                                                                                                                                        <  2:876518‑M1/14‑1 (MQ=255)
               tttAGTCCATCTCTAATTGCATATTTTAATTTTTCTGATAAATGGCATTGAGCATCGATTTCATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcga                                                                                                                                       >  2:671737‑M1/1‑139 (MQ=255)
                  gccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACAGGCAAaaga                                                                                                                                     <  1:1023473‑M1/17‑1 (MQ=255)
                  aGTCCATCTCTAATTGCATATTTTAATTTTTCTGATAAATGGCATTGAGCATCGATTTCATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaa                                                                                                                                   <  1:171827‑M1/151‑16 (MQ=255)
                   gTCCATCTCTAATTGCATATTTTAATTTTTCTGATAAATGGCATTGAGCATCGATTTCATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaag                                                                                                                                  <  1:815289‑M1/151‑17 (MQ=255)
                     ttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGcc                                                                                                                                 <  1:894556‑M1/21‑1 (MQ=255)
                       aTCTCTAATTGCATATTTTAATTTTTCTGATAAATGGCATTGAGCATCGATTTCATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccc                                                                                                                              >  1:1031294‑M1/1‑131 (MQ=255)
                         atggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTa                                                                                                                                                   >  1:439193‑M1/126‑128 (MQ=255)
                          tctAATTGCATATTTTAATTTTTCTGATAACTGGCATTGAGCATCGATTTCATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctg                                                                                                                            >  2:678712‑M1/1‑128 (MQ=255)
                            gcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTcc                                                                                                                         <  1:411269‑M1/29‑1 (MQ=255)
                             cgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTcc                                                                                                                         <  1:53239‑M1/29‑1 (MQ=255)
                                 gCATATTTTAATTTTTCTGATAAATGGCATTGAGCATCGATTTCATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgag                                                                                                                     <  1:696360‑M1/150‑30 (MQ=255)
                                  aaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGc                                                                                                                   <  2:113528‑M1/35‑1 (MQ=255)
                                     cggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGt                                                                                                                >  2:849099‑M1/114‑151 (MQ=255)
                                      ggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGtt                                                                                                               >  2:134342‑M1/113‑151 (MQ=255)
                                      ggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGtt                                                                                                               >  1:913007‑M1/113‑151 (MQ=255)
                                      ggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGtt                                                                                                               <  2:577149‑M1/39‑1 (MQ=255)
                                      ggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGtt                                                                                                               >  1:240004‑M1/113‑151 (MQ=255)
                                       tttAATTTTTCTGATAAATGGCATTGAGCATCGATTTCATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgt                                                                                                              >  2:1164368‑M1/1‑115 (MQ=255)
                                         tAATTTTTCTGATAAATGGCATTGAGCATCGATTTCATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtt                                                                                                             <  1:1164339‑M1/150‑38 (MQ=255)
                                           aTTTTTCTGATAAATGGCATTGAGCATCGATTTCATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgt                                                                                                          >  2:245283‑M1/1‑111 (MQ=255)
                                                 gctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACaccacc                                                                                                    >  2:652992‑M1/102‑151 (MQ=255)
                                                  ctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCg                                                                                                   <  1:842744‑M1/51‑1 (MQ=255)
                                                   gATAAATGGCATTGAGCATCGATTTCATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgga                                                                                                  <  1:776066‑M1/151‑49 (MQ=255)
                                                   gATAAATGGCATTGAGCATCGATTTCATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgg                                                                                                   >  1:649600‑M1/1‑103 (MQ=255)
                                                        caaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCtat                                                                                              <  1:400512‑M1/56‑1 (MQ=255)
                                                        aTGGCATTGAGCATCGATTTCATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagcca                                                                                              >  1:668057‑M1/1‑98 (MQ=255)
                                                           gCATTGAGCATCGATTTCATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccat                                                                                             >  2:1166649‑M1/1‑95 (MQ=255)
                                                              ttGAGCATCGATTTCATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaac                                                                                        >  2:182755‑M1/1‑92 (MQ=255)
                                                                    gggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGcc                                                                                 <  2:449597‑M1/69‑1 (MQ=255)
                                                                    aTCGATTTCATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttc                                                                                 >  2:202708‑M1/1‑86 (MQ=255)
                                                                    aTCGATTTCATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttc                                                                                 <  1:865381‑M1/151‑66 (MQ=255)
                                                                     tCGATTTCATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggtt                                                                                  >  1:82304‑M1/1‑85 (MQ=255)
                                                                     ggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCca                                                                                >  1:817220‑M1/82‑151 (MQ=255)
                                                                      gagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCcac                                                                               <  2:1049405‑M1/71‑1 (MQ=255)
                                                                        aTTTCATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatca                                                                             <  1:1066930‑M1/151‑70 (MQ=255)
                                                                        aTTTCATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatca                                                                             <  2:276815‑M1/151‑70 (MQ=255)
                                                                        aTTTCATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatc                                                                              >  1:267298‑M1/1‑82 (MQ=255)
                                                                         aaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCCACATc                                                                            >  2:54022‑M1/78‑151 (MQ=255)
                                                                          ttCATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatg                                                                           >  1:848190‑M1/1‑80 (MQ=255)
                                                                           tCATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatg                                                                           >  1:595478‑M1/1‑79 (MQ=255)
                                                                            cATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga                                                                          <  2:217380‑M1/150‑73 (MQ=255)
                                                                             aatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCCACATCCAtt                                                                        >  1:895634‑M1/74‑151 (MQ=255)
                                                                             aTTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagt                                                                        >  2:920923‑M1/1‑77 (MQ=255)
                                                                                 aaaaCAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatc                                                                    <  2:352810‑M1/151‑79 (MQ=255)
                                                                                 aaaaCAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcat                                                                     <  2:1115292‑M1/150‑78 (MQ=255)
                                                                                   aacaacTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaa                                                                  <  1:767434‑M1/151‑81 (MQ=255)
                                                                                     caaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCCACATCCATTGAAAAATc                                                                >  1:354768‑M1/66‑151 (MQ=255)
                                                                                      aaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCCACATCCATTGAAAAATCg                                                               <  2:1054307‑M1/87‑1 (MQ=255)
                                                                                      aaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCCACATCCATTGAAAAATCg                                                               <  2:404608‑M1/87‑1 (MQ=255)
                                                                                      aaacatgaagaaatgaaatgactgagtcagacgagaagaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCCACATCCATTGAAAAATCg                                                               <  1:170745‑M1/87‑1 (MQ=255)
                                                                                       aacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCCACATCCATTGAAAAATCGc                                                              <  2:903620‑M1/88‑1 (MQ=255)
                                                                                          gTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacct                                                           <  1:965844‑M1/151‑88 (MQ=255)
                                                                                           tgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCCACATCCATTGAAAAATCGCCa                                                            <  1:4176‑M1/90‑1 (MQ=255)
                                                                                            acacacTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttc                                                         <  2:1077329‑M1/151‑90 (MQ=255)
                                                                                               gaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCCACATCCATTGAAAAATCGCCAAGaaa                                                       <  2:287438‑M1/95‑1 (MQ=255)
                                                                                                acTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccg                                                     <  2:966566‑M1/151‑94 (MQ=255)
                                                                                                 cTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggcgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccg                                                     >  2:146790‑M1/1‑57 (MQ=255)
                                                                                                           ctgagtcagccgcgaagaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCCACATCCATTGAAAAATCGCCAAGAAAATTAACCAGAtct                                          <  2:231741‑M1/108‑1 (MQ=255)
                                                                                                            tgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCCACATCCATTGAAAAATCGCCAAGAAAATTAACCAGAtctc                                         <  2:597821‑M1/109‑1 (MQ=255)
                                                                                                             gagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCCACATCCATTGAAAAATCGCCAAGAAAATTAACCAGAtct                                          >  1:998126‑M1/42‑149 (MQ=255)
                                                                                                               gtcagccgagaagaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCCACATCCATTGAAAAATCGCCAAGAAAATTAACCAGATCTCGc                                       >  1:247894‑M1/40‑150 (MQ=255)
                                                                                                               aaaaTTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagc                                       <  2:1088470‑M1/150‑108 (MQ=255)
                                                                                                                    tGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaa                                  <  1:466718‑M1/150‑113 (MQ=255)
                                                                                                                      gagaagaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCCACATCCATTGAAAAATCGCCAAGAAAATTAACCAGATCTCGCTCTGAACt                               <  1:1179751‑M1/119‑1 (MQ=255)
                                                                                                                       agaagaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCCACATCCATTGAAAAATCGCCAAGAAAATTAACCAGATCTCGCTCTGAACTc                              <  1:1077669‑M1/120‑1 (MQ=255)
                                                                                                                          agaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCCACATCCATTGAAAAATCGCCAAGAAAATTAACCAGATCTCGCTCTGAACTCata                           >  1:236130‑M1/29‑151 (MQ=255)
                                                                                                                            cGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtca                         <  2:945827‑M1/151‑122 (MQ=255)
                                                                                                                            aatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCCACATCCATTGAAAAATCGCCAAGAAAATTAACCAGATCTCGCTCTGAACTCataat                         >  1:1133872‑M1/27‑151 (MQ=255)
                                                                                                                              aCAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtc                          >  2:503871‑M1/1‑28 (MQ=255)
                                                                                                                               cAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagac                      >  2:907286‑M1/1‑27 (MQ=255)
                                                                                                                               cAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagac                      >  2:740853‑M1/1‑27 (MQ=255)
                                                                                                                                 aGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagacca                    <  1:805006‑M1/151‑127 (MQ=255)
                                                                                                                                   ccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCCACATCCATTGAAAAATCGCCAAGAAAATTAACCAGATCTCGCTCTGAACTCATAATAAATTCt                  >  1:264070‑M1/20‑151 (MQ=255)
                                                                                                                                   ccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCCACATCCATTGAAAAATCGCCAAGAAAATTAACCAGATCTCGCTCTGAACTCATAATAAATTCt                  >  2:13360‑M1/20‑151 (MQ=255)
                                                                                                                                   aaTTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagacc                     >  2:527209‑M1/1‑23 (MQ=255)
                                                                                                                                    cgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCCACATCCATTGAAAAATCGCCAAGAAAATTAACCAGATCTCGCTCTGAACTCATAATAAATTCt                  <  2:803566‑M1/132‑1 (MQ=255)
                                                                                                                                     gcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCCACATCCATTGAAAAATCGCCAAGAAAATTAACCAGATCTCGCTCTGAACTCATAATAAATTCTAt                <  2:499170‑M1/134‑1 (MQ=255)
                                                                                                                                       aCTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaa                >  1:75114‑M1/1‑19 (MQ=255)
                                                                                                                                         attcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCCACATCCATTGAAAAATCGCCAAGAAAATTAACCAGATCTCGCTCTGAACTCATAATAAATTCTATGGtt            >  1:598562‑M1/14‑151 (MQ=255)
                                                                                                                                              aGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagatttt       <  1:747303‑M1/151‑140 (MQ=255)
                                                                                                                                               accttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCCACATCCATTGAAAAATCGCCAAGAAAATTAACCAGATCTCGCTCTGAACTCATAATAAATTCTATGGTTctgctg      >  1:1151334‑M1/8‑151 (MQ=255)
                                                                                                                                                ccAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttct     >  1:475811‑M1/1‑10 (MQ=255)
                                                                                                                                                  ttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCCACATCCATTGAAAAATCGCCAAGAAAATTAACCAGATCTCGCTCTGAACTCATAATAAATTCTATGGTTCTGCTGAtt   <  1:220953‑M1/147‑1 (MQ=255)
                                                                                                                                                  aaaGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttctt    <  1:282307‑M1/150‑143 (MQ=255)
                                                                                                                                                   tccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCCACATCCATTGAAAAATCGCCAAGAAAATTAACCAGATCTCGCTCTGAACTCATAATAAATTCTATGGTTCTGCTGat  >  1:91528‑M1/4‑149 (MQ=255)
                                                                                                                                                   tccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCCACATCCATTGAAAAATCGCCAAGAAAATTAACCAGATCTCGCTCTGAACTCATAATAAATTCTATGGTTCTGCTGAttt  <  1:157681‑M1/148‑1 (MQ=255)
                                                                                                                                                      cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgt  <  1:685861‑M1/148‑145 (MQ=255)
                                                                                                                                                      |                                                                                                                                                   
AGTTCCTGTTGCCGTTTTAGTCCATCTCTAATTGCATATTTTAATTTTTCTGATAAATGGCATTGAGCATCGATTTCATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCCACATCCATTGAAAAATCGCCAAGAAAATTAACCAGATCTCGCTCTGAACTCATAATAAATTCTATGGTTCTGCTGATTT  >  NC_000913/238813‑239110

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.