Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 238,963 IS5 (+) +4 bp pseudogene (137‑140/357 nt) yafU ← pseudogene

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 238963 =0 (0.000)85 (1.120) 55/298 0.7 100% pseudogene (140/357 nt) yafU pseudogene
?NC_000913 273955 = NA (NA)noncoding (1195/1195 nt) IS5 repeat region
* ? NC_000913 = 2389660 (0.000)99 (1.300) 74/298 0.1 100% pseudogene (137/357 nt) yafU pseudogene
?NC_000913 = 275149 NA (NA)noncoding (1/1195 nt) IS5 repeat region

Only 100 of 172 total aligned reads displayed.

TCCTGTTGCCGTTTTAGTCCATCTCTAATTGCATATTTTAATTTTTCTGATAAATGGCATTGAGCATCGATTTCATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCCACATCCATTGAAAAATCGCCAAGAAAATTAACCAGATCTCGCTCTGAACTCATAATAAATTCTATGGTTCTGCTGATTTAACCG  >  NC_000913/238816‑239115
                                                                                                                                                      |                                                                                                                                                     
aaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa                                                                                                                                                       >  2:520893‑M1/148‑151 (MQ=255)
 aaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa                                                                                                                                                       <  2:986274‑M1/4‑1 (MQ=255)
 aaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttacccgcttattcgcaccttccCTaa                                                                                                                                                       <  2:434799‑M1/4‑1 (MQ=255)
   tGTTGCCGTTTTAGTCCATCTCTAATTGCATATTTTAATTTTTCTGATAAATGGCATTGAGCATCGATTTCATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAgg                                                                                                                                                     >  2:141896‑M1/1‑148 (MQ=255)
     tggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAacac                                                                                                                                                    <  2:4164‑M1/7‑1 (MQ=255)
      ggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAcaca                                                                                                                                                   >  1:805691‑M1/142‑149 (MQ=255)
          gTTTTAGTCCATCTCTAATTGCATATTTTAATTTTTCTGATAAATGGCATTGAGCATCGATTTCATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcg                                                                                                                                             >  1:1088443‑M1/1‑141 (MQ=255)
           taacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACAGGCaaa                                                                                                                                             <  2:876518‑M1/14‑1 (MQ=255)
              tAGTCCATCTCTAATTGCATATTTTAATTTTTCTGATAAATGGCATTGAGCATCGATTTCATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaac                                                                                                                                          >  1:843239‑M1/1‑137 (MQ=255)
               gccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACAGGCAAaaga                                                                                                                                          <  1:1023473‑M1/17‑1 (MQ=255)
               aGTCCATCTCTAATTGCATATTTTAATTTTTCTGATAAATGGCATTGAGCATCGATTTCATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaa                                                                                                                                        <  1:171827‑M1/151‑16 (MQ=255)
               aGTCCATCTCTAATTGCATATTTTAATTTTTCTGATAAATGGCATTGAGCATCGATTTCATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaaca                                                                                                                                         >  1:69880‑M1/1‑136 (MQ=255)
                  ttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGcc                                                                                                                                      <  1:894556‑M1/21‑1 (MQ=255)
                  ccATCTCTAATTGCATATTTTAATTTTTCTGATAAATGGCATTGAGCATCGATTTCATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagt                                                                                                                                      <  2:483661‑M1/150‑18 (MQ=255)
                   cATCTCTAATTGCATATTTTAATTTTTCTGATAAATGGCATTGAGCATCGATTTCATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtcc                                                                                                                                    <  2:735507‑M1/151‑20 (MQ=255)
                    aTCTCTAATTGCATATTTTAATTTTTCTGATAAATGGCATTGAGCATCGATTTCATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccc                                                                                                                                   >  1:1031294‑M1/1‑131 (MQ=255)
                       tctAATTGCATATTTTAATTTTTCTGATAACTGGCATTGAGCATCGATTTCATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctg                                                                                                                                 >  2:678712‑M1/1‑128 (MQ=255)
                         gcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTcc                                                                                                                              <  1:411269‑M1/29‑1 (MQ=255)
                          aaTTGCATATTTTAATTTTTCTGATAAATGGCATTGAGCATCGATTTCATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgat                                                                                                                               <  2:158977‑M1/149‑25 (MQ=255)
                           aTTGCATATTTTAATTTTTCTGATAAATGGCATTGAGCATCGATTTCATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatg                                                                                                                            <  2:191983‑M1/151‑28 (MQ=255)
                            aagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCa                                                                                                                             >  2:1167260‑M1/120‑149 (MQ=255)
                               aaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGc                                                                                                                        <  2:113528‑M1/35‑1 (MQ=255)
                                  cggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGt                                                                                                                     >  2:849099‑M1/114‑151 (MQ=255)
                                   ggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGtt                                                                                                                    >  2:134342‑M1/113‑151 (MQ=255)
                                   ggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGtt                                                                                                                    <  2:577149‑M1/39‑1 (MQ=255)
                                   ggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGtt                                                                                                                    >  1:240004‑M1/113‑151 (MQ=255)
                                    tttAATTTTTCTGATAAATGGCATTGAGCATCGATTTCATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgt                                                                                                                   >  2:1164368‑M1/1‑115 (MQ=255)
                                      tAATTTTTCTGATAAATGGCATTGAGCATCGATTTCATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtt                                                                                                                  <  1:1164339‑M1/150‑38 (MQ=255)
                                        aTTTTTCTGATAAATGGCATTGAGCATCGATTTCATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgt                                                                                                               >  2:245283‑M1/1‑111 (MQ=255)
                                           tttCTGATAAATGGCATTGAGCATCGATTTCATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtca                                                                                                             <  1:90312‑M1/150‑43 (MQ=255)
                                              gctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACaccacc                                                                                                         >  2:652992‑M1/102‑151 (MQ=255)
                                               ctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCg                                                                                                        <  1:842744‑M1/51‑1 (MQ=255)
                                                gATAAATGGCATTGAGCATCGATTTCATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgga                                                                                                       <  1:776066‑M1/151‑49 (MQ=255)
                                                     aTGGCATTGAGCATCGATTTCATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagcca                                                                                                   >  1:668057‑M1/1‑98 (MQ=255)
                                                       ggCATTGAGCATCGATTTCATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccat                                                                                                  >  1:1142346‑M1/1‑96 (MQ=255)
                                                           ttGAGCATCGATTTCATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaac                                                                                             >  2:182755‑M1/1‑92 (MQ=255)
                                                             gAGCATCGATTTCATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacag                                                                                           <  2:547082‑M1/150‑61 (MQ=255)
                                                                 aTCGATTTCATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttc                                                                                      <  1:865381‑M1/151‑66 (MQ=255)
                                                                  ggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCca                                                                                     >  1:817220‑M1/82‑151 (MQ=255)
                                                                   gagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCcac                                                                                    <  2:1049405‑M1/71‑1 (MQ=255)
                                                                     aTTTCATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatc                                                                                   >  1:267298‑M1/1‑82 (MQ=255)
                                                                     aTTTCATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatc                                                                                   >  2:1196805‑M1/1‑82 (MQ=255)
                                                                       ttCATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatg                                                                                >  1:848190‑M1/1‑80 (MQ=255)
                                                                        tCATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatg                                                                                >  1:595478‑M1/1‑79 (MQ=255)
                                                                         cATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga                                                                               <  2:217380‑M1/150‑73 (MQ=255)
                                                                          aTTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagt                                                                             >  2:920923‑M1/1‑77 (MQ=255)
                                                                             cggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACaccacc                                                                                                         <  1:913425‑M1/50‑1 (MQ=255)
                                                                              aaaaCAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatc                                                                         <  2:352810‑M1/151‑79 (MQ=255)
                                                                              aaaaCAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcat                                                                          <  2:1115292‑M1/150‑78 (MQ=255)
                                                                                aacaacTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaa                                                                       <  1:767434‑M1/151‑81 (MQ=255)
                                                                                 acaacTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaac                                                                      >  2:611525‑M1/1‑70 (MQ=255)
                                                                                 acaacTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatca                                                                        >  1:150938‑M1/1‑70 (MQ=255)
                                                                                   aacTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactt                                                                    >  1:627669‑M1/1‑68 (MQ=255)
                                                                                   aaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCCACATCCATTGAAAAATCg                                                                    <  2:404608‑M1/87‑1 (MQ=255)
                                                                                   aaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCCACATCCATTGAAAAATCg                                                                    <  2:1054307‑M1/87‑1 (MQ=255)
                                                                                   aaacatgaagaaatgaaatgactgagtcagacgagaagaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCCACATCCATTGAAAAATCg                                                                    <  1:170745‑M1/87‑1 (MQ=255)
                                                                                    aacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCCACATCCATTGAAAAATCGc                                                                   <  2:903620‑M1/88‑1 (MQ=255)
                                                                                         gaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCCACATCCATTGAAAAATCGCCa                                                                 <  1:432087‑M1/90‑1 (MQ=255)
                                                                                         gaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCCACATCCATTGAAAAATCGCCAAg                                                               >  1:985026‑M1/59‑150 (MQ=255)
                                                                                         acacacTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttc                                                              <  2:1077329‑M1/151‑90 (MQ=255)
                                                                                            gaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCCACATCCATTGAAAAATCGCCAAGaaa                                                            <  2:287438‑M1/95‑1 (MQ=255)
                                                                                             acTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccg                                                          <  2:966566‑M1/151‑94 (MQ=255)
                                                                                               tATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccga                                                         >  1:111465‑M1/1‑56 (MQ=255)
                                                                                                      gTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtga                                                   <  1:481681‑M1/149‑101 (MQ=255)
                                                                                                        ctgagtcagccgcgaagaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCCACATCCATTGAAAAATCGCCAAGAAAATTAACCAGAtct                                               <  2:231741‑M1/108‑1 (MQ=255)
                                                                                                        cAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaatt                                                <  1:408909‑M1/150‑104 (MQ=255)
                                                                                                         tgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCCACATCCATTGAAAAATCGCCAAGAAAATTAACCAGAtctc                                              <  2:597821‑M1/109‑1 (MQ=255)
                                                                                                         aGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattc                                               >  2:1010016‑M1/1‑46 (MQ=255)
                                                                                                            gtcagccgagaagaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCCACATCCATTGAAAAATCGCCAAGAAAATTAACCAGATCTCGc                                            >  1:247894‑M1/40‑150 (MQ=255)
                                                                                                            aaaaTTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagc                                            <  2:1088470‑M1/150‑108 (MQ=255)
                                                                                                               agccgagaagaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCCACATCCATTGAAAAATCGCCAAGAAAATTAACCAGATCTCGCTCTg                                        <  1:864182‑M1/115‑1 (MQ=255)
                                                                                                                 tGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaa                                       <  1:466718‑M1/150‑113 (MQ=255)
                                                                                                                    agaagaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCCACATCCATTGAAAAATCGCCAAGAAAATTAACCAGATCTCGCTCTGAACTc                                   <  1:1077669‑M1/120‑1 (MQ=255)
                                                                                                                     cctccGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcgtgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgc                                   <  1:1178570‑M1/150‑117 (MQ=255)
                                                                                                                       agaatttccccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCCACATCCATTGAAAAATCGCCAAGAAAATTAACCAGATCTCGCTCTGAACTCata                                >  1:236130‑M1/29‑151 (MQ=255)
                                                                                                                        ccGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtc                               <  1:331214‑M1/151‑121 (MQ=255)
                                                                                                                        ccGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgt                                <  1:53053‑M1/150‑120 (MQ=255)
                                                                                                                         cGACAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtca                              <  2:945827‑M1/151‑122 (MQ=255)
                                                                                                                            cAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagac                           >  2:907286‑M1/1‑27 (MQ=255)
                                                                                                                            cAAGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagac                           >  2:740853‑M1/1‑27 (MQ=255)
                                                                                                                              aGAATTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagacca                         <  1:805006‑M1/151‑127 (MQ=255)
                                                                                                                                ccgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCCACATCCATTGAAAAATCGCCAAGAAAATTAACCAGATCTCGCTCTGAACTCATAATAAATTCt                       >  1:264070‑M1/20‑151 (MQ=255)
                                                                                                                                 cgcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCCACATCCATTGAAAAATCGCCAAGAAAATTAACCAGATCTCGCTCTGAACTCATAATAAATTCt                       <  2:803566‑M1/132‑1 (MQ=255)
                                                                                                                                 aTTACTGGAAAGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaa                      <  1:276295‑M1/151‑130 (MQ=255)
                                                                                                                                  gcttattcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCCACATCCATTGAAAAATCGCCAAGAAAATTAACCAGATCTCGCTCTGAACTCATAATAAATTCTAt                     <  2:499170‑M1/134‑1 (MQ=255)
                                                                                                                                      attcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCCACATCCATTGAAAAATCGCCAAGAAAATTAACCAGATCTCGCTCTGAACTCATAATAAATTCTATGGtt                 <  2:25636‑M1/138‑1 (MQ=255)
                                                                                                                                      attcgcaccttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCCACATCCATTGAAAAATCGCCAAGAAAATTAACCAGATCTCGCTCTGAACTCATAATAAATTCTATGGtt                 >  2:532547‑M1/14‑151 (MQ=255)
                                                                                                                                           aGCCAAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagatttt            <  1:747303‑M1/151‑140 (MQ=255)
                                                                                                                                               ttccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCCACATCCATTGAAAAATCGCCAAGAAAATTAACCAGATCTCGCTCTGAACTCATAATAAATTCTATGGTTCTGCTGAtt        <  1:220953‑M1/147‑1 (MQ=255)
                                                                                                                                                tccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCCACATCCATTGAAAAATCGCCAAGAAAATTAACCAGATCTCGCTCTGAACTCATAATAAATTCTATGGTTCTGCTGata        >  1:91528‑M1/4‑149 (MQ=255)
                                                                                                                                                tccCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCCACATCCATTGAAAAATCGCCAAGAAAATTAACCAGATCTCGCTCTGAACTCATAATAAATTCTATGGTTCTGCTGAttt       <  1:362713‑M1/148‑1 (MQ=255)
                                                                                                                                                   cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtccc    >  1:735441‑M1/1‑4 (MQ=255)
                                                                                                                                                   cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgt       <  1:685861‑M1/148‑145 (MQ=255)
                                                                                                                                                    tAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccg   >  2:665550‑M1/1‑3 (MQ=255)
                                                                                                                                                    tAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccg   >  1:854808‑M1/1‑3 (MQ=255)
                                                                                                                                                    tAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCCACATCCATTGAAAAATCGCCAAGAAAATTAACCAGATCTCGCTCTGAACTCATAATAAATTCTATGGTTCTGCTGATTTAAcc   >  1:68348/1‑151 (MQ=255)
                                                                                                                                                     aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgc  >  1:626375‑M1/1‑2 (MQ=255)
                                                                                                                                                     aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtccc    <  1:651233‑M1/149‑148 (MQ=255)
                                                                                                                                                      aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgc  >  1:1055327‑M1/1‑1 (MQ=255)
                                                                                                                                                      aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgc  >  2:1088526‑M1/1‑1 (MQ=255)
                                                                                                                                                      |                                                                                                                                                     
TCCTGTTGCCGTTTTAGTCCATCTCTAATTGCATATTTTAATTTTTCTGATAAATGGCATTGAGCATCGATTTCATTTAAAACAACTGTACACACTATCCCTGTCAGTAAAATTGCTCCTCCGACAAGAATTACTGGAAAGCCAAAGCTAACACAGGCAAAAGAAGCCAGACTTCCAATAGCGGTTGCAACACCACCGGCTATAACTGCTTTGGCCACATCCATTGAAAAATCGCCAAGAAAATTAACCAGATCTCGCTCTGAACTCATAATAAATTCTATGGTTCTGCTGATTTAACCG  >  NC_000913/238816‑239115

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.