| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4606207 | 8 (0.200) | 28 (0.660) +GGG |
26/276 | 0.9 | 77.6% | noncoding (80/87 nt) | leuP | tRNA‑Leu |
| ? | NC_000913 | 4606208 = | 8 (0.180) | noncoding (79/87 nt) | leuP | tRNA‑Leu | |||||
AAGGAAGTAAAGATAATTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACAC‑TAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGC‑ACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGT‑GC‑GA‑‑GGGGG‑‑GGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTC > NC_000913/4606062‑4606347 | aaGGAAGTAAAGATAATTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACAC‑TAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGC‑ACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGT‑GC‑GAggggg < 2:664354‑M1/151‑6 (MQ=255) aGGAAGTAAAGATAATTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACAC‑TAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGC‑ACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGT‑GC‑GAgggggg < 2:486837‑M1/151‑7 (MQ=255) ggAAGTAAAGATAATTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACAC‑TAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGC‑ACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGT‑GC‑GAggggggg < 2:216256‑M1/151‑8 (MQ=255) tGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACAC‑TAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGC‑ACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGT‑GC‑GAggggggggggacttgaaccccc > 1:11589‑M1/1‑129 (MQ=255) tGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACAC‑TAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGC‑ACAGTCATATTACTTTTTTTGATATCGTCTCGCTGGGG‑GC‑GA‑‑gggtg‑‑ggggttctcaactcccc > 2:555882/1‑137 (MQ=17) gTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACAC‑TAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGC‑ACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGT‑GC‑GAggggggggggacttgaacccccac < 1:139961‑M1/151‑25 (MQ=255) gTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACAC‑TAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGC‑ACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGT‑GC‑GAggggggggggacttgaacccccac < 2:191301‑M1/151‑25 (MQ=255) tGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACAC‑TAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGC‑ACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGT‑GC‑GAggggggggggacttgaacccccacg > 1:517939‑M1/1‑126 (MQ=255) aGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACAC‑TAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGC‑ACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGT‑GC‑GAG‑GGGGG‑‑GGGACTTGAACCCCCACGTCCGt < 1:646824/151‑1 (MQ=255) ggggggggACTTGAACCCCCACGTCCGTAAGGACAC‑TAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGC‑ACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGT‑GC‑GAggggggggggacttgaacccccacgtccgt > 1:385297‑M1/1‑121 (MQ=255) gggACTTGAACCCCCACGTCCGTAAGGACAC‑TAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGC‑ACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGT‑GC‑GAggggggggggacttgaacccccacgtccgtaaga > 1:582349‑M1/1‑116 (MQ=255) aaCCCCCACGTCCGTAAGGACAC‑TAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGC‑ACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGT‑GC‑GAggggggggggacttgaacccccacgtccgtaagaacactaaca < 1:466535‑M1/151‑44 (MQ=255) caacttcggaaGGACACTTAACACC‑GAAAGTAGGGCAGTTACCAAATCCGGCACCGTCGCAACGGTCACTTAACTTTTTTTGA‑ATCGGCCCGTTTGGTGGCGGG‑‑GGGGG‑‑GGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGaa < 2:445051/142‑1 (MQ=9) cACGTCCGTAAGGACAC‑TAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGC‑ACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGT‑GC‑GAggggggggggacttgaacccccacgtccgtaagaacactaacacctgaa < 1:680241‑M1/151‑50 (MQ=255) ccGTAATGACAC‑TAACATCTGATGCTAGCACGTCTACCAAGTCCGGCACCTGCGC‑ACAGACATCTTGCTTTTTTTGCTATCGCATCGTTTGGT‑GC‑GAGGGGGGG‑‑GGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAg < 2:643389/151‑1 (MQ=21) cGTAAGGACAC‑TAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGC‑ACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGT‑GC‑GAggggggggggacttgaacccccacgtccgtaagaacactaacacctgaagctagc < 1:23309‑M1/151‑56 (MQ=255) acac‑TAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGC‑ACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGT‑GC‑GAggggggggggacttgaacccccacgtccgtaagaacactaacacctgaagctagcgcgtcta < 1:576155‑M1/151‑63 (MQ=255) acCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGC‑ACAGTAATCTTACTTTTTTTGATATCGCCTCGTTAGAT‑GC‑GA‑‑GGGGGGTGGGACTTTAATCCCCACGTTTGAAAGAACACTAACTCCTGAACTTAGCTCGTCTACAAATTcc > 1:370460/1‑151 (MQ=25) aGCTAGCGCGTCTACCAATTCCGCCACCTTCGC‑ACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGT‑GC‑GAggggggggggacttgaacccccacgtccgtaagaacactaacacctgaagctagcgcgtctaccaattccgccacc > 1:597095‑M1/1‑75 (MQ=255) tagcataattACCAATTCCCCCAGCTGCGC‑AAAGTCAGCTTACATTTTTTGATATCGCATCATTTTTT‑TC‑GAGGGGGGG‑‑GGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGc < 2:42559/135‑1 (MQ=17) tAGCGCGTCTACCAATTCCGCCGGCTTCGC‑ACAGTAATCTTACTTTTTTTGATATCGCCTCGTTTTGT‑GC‑GAggggggggggacttgaacccccacgtccgtaagaacactaacacctgaagctagcgcgtctaccaattccgccacct < 2:288563‑M1/149‑78 (MQ=255) gTCTACCAATTCCGCCACCTTCGC‑ACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGT‑GC‑GAggggggggggacttgaacccccacgtccgtaagaacactaacacctgaagctagcgcgtctaccaattccgccaccttcgccc > 1:343172‑M1/1‑66 (MQ=255) cGCCACCTTCGC‑ACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGT‑GC‑GAggggggggggacttgaacccccacgtccgtaagaacactaacacctgaagctagcgcgtctaccaattccgccaccttcgcccagtgcgagcaatat < 1:20318‑M1/151‑98 (MQ=255) tCGC‑ACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGT‑GC‑GAggggggggggacttgaacccccacgtccgtaagaacactaacacctgaagctagcgcgtctaccaattccgccaccttcgcccagtgcgagcaatatcaacgtg < 1:311393‑M1/150‑105 (MQ=255) tCGC‑ACAGTCATCTTACTCTGTATGATATCGCCACGTTTGGT‑GC‑GAgaggggggggacttgaacccccacgtccgtaagaacactaacacctgaagctagcgcgtctaccaattcctccaccttcgcccagtgcgagca < 2:179350‑M1/139‑94 (MQ=255) cGC‑ACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGT‑GC‑GAgggggggggggacttgaacccccacgtccgtaagaacactaacacctgaagctagcgcgtctaccaattccgccaccttcgcccagtgcgagcaatatcaacgtgg > 2:583211‑M1/1‑45 (MQ=255) cGC‑ACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGT‑GC‑GAG‑GGGGG‑‑GGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGt < 1:250088/150‑1 (MQ=255) gC‑ACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGT‑GC‑GAggggggggggacttgaacccccacgtccgtaagaacactaacacctgaagctagcgcgtctaccaattccgccaccttcgcccagtgcgagcaatatcaacgaggtt > 2:319881‑M1/1‑44 (MQ=255) gTCATCTTACTTTTTTTGATATCGCCTCGTTTGGT‑GC‑GAggggggggggacttgaacccccacgtccgtaagaacactaacacctgaagctagcgcgtctaccaattccgccaccttcgcccagtgcgagcaatatcaacgtggtttttgg < 1:473058‑M1/151‑113 (MQ=255) tCATCTTACTTTTTTTGATATCGCCTCGTTTGGT‑GC‑GAggggggggggacttgaacccccacgtccgtaagaacactaacacctgaagctagcgcgtctaccaattccgccaccttcgcccagtgcgagcaatatcaacgtggtttttgg > 1:432041‑M1/1‑38 (MQ=255) cTTTTTTTGATATCGCCTCGTTTGGT‑GC‑GAgggggggggggacttgaacccccacgtccgtaagaacactaacacctgaagctagcgcgtctaccaattccgccaccttcgcccagtgcgagcaatatcaacgtggtttttggtgcgagg < 2:586323‑M1/150‑121 (MQ=255) tttttGATATCGCCTCGTTTGGG‑GC‑GAggggggggggacttgaacccccacgtccgtaagaacactaacacctgaagctagcgcgtctaccaattccgccaccttcgcccagtgcgagcaatatcaacgtggtttttggtgcgagggggg < 2:451613‑M1/150‑124 (MQ=255) tGATATCGCCTCGTTTGGT‑GC‑GAggggggggggacttgaacccccacgtccgtaagaacactaacacctgaagctagcgcgtctaccaattccgccaccttcgcccagtgcgagcaatatcaacgtggtttttggtgcgagggggggggct > 2:289866‑M1/1‑23 (MQ=255) tCGCCTCGTTTGGT‑GC‑GAggggggggggacttgaacccccacgtccgtaagaacactaacacctgaagctagcgcgtctaccaattccgccaccttcgcccagtgcgagcaatatcaacgtggtttttggtgcgagggggggggcttgaac > 1:607080‑M1/1‑18 (MQ=255) cGCCTCGTTTGGT‑GC‑GAGGGGGGG‑‑GGGACTTGAACCCCCACGTCCGGAAGGACACTAACAACTGAAGCTAGCGCGTCTACCAATTCCGCCCCCTTCGCCCAGTGCGAACCATTTCAACGTGGTTTTTTGAGCGAgggggggggggcttga > 2:584746/1‑142 (MQ=17) ccTCGTTTGGT‑GC‑GAggggggggggacttgaacccccacgtccgtaagaacactaacacctgaagctagcgcgtctaccaattccgccaccttcgcccagtgcgagcaatatcaacgtggtttttggtgcgagggggggggcttgaacccc > 1:538170‑M1/1‑15 (MQ=255) tGGT‑GC‑GAggggggggggacttgaacccccacgtccgtaagaacactaacacctgaagctagcgcgtctaccaattccgccaccttcgcccagtgcgagcaatatcaacgtggtttttggtgcgagggggggggcttgaacccccacgtcc > 1:179456‑M1/1‑8 (MQ=255) tGGT‑GC‑GAggggggggggacttgaacccccacgtccgtaagaacactaacacctgaagctagcgcgtctaccaattccgccaccttcgcccagtgcgagcaatatcaacgtggtttttggtgcgagggggggggctggaacccccacgtcc > 2:652661‑M1/1‑8 (MQ=255) gT‑GC‑GAggggggggggacttgaacccccacgtccgtaagaacactaacacctgaagctagcgcgtctaccaattccgccaccttcgcccagtgcgagcaatatcaacgtggtttttggtgcgaggggggggggcttgaacccccacgtcc < 2:150262‑M1/150‑145 (MQ=255) | AAGGAAGTAAAGATAATTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACAC‑TAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGC‑ACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGT‑GC‑GA‑‑GGGGG‑‑GGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTC > NC_000913/4606062‑4606347 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |