| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4606207 | 8 (0.200) | 28 (0.660) +GGG |
26/276 | 0.9 | 77.6% | noncoding (80/87 nt) | leuP | tRNA‑Leu |
| ? | NC_000913 | 4606208 = | 8 (0.180) | noncoding (79/87 nt) | leuP | tRNA‑Leu | |||||
GAAGTAAAGATAATTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACAC‑TAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGC‑ACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGT‑GC‑GA‑‑GGGGG‑‑GGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACAC > NC_000913/4606065‑4606358 | aaggaagtaaagataattggtgcgaggggggggacttgaacccccacgtccgtaaggacactaacacctgaagctagcgcgtctaccaattccgccaccttcgcacagtcatcttactttttttgatatcgcctcgtttggtgcgaggggg < 2:664354‑M2/2‑1 (MQ=255) aggaagtaaagataattggtgcgaggggggggacttgaacccccacgtccgtaaggacactaacacctgaagctagcgcgtctaccaattccgccaccttcgcacagtcatcttactttttttgatatcgcctcgtttggtgcgagggggg < 2:486837‑M2/3‑1 (MQ=255) ggaagtaaagataattggtgcgaggggggggacttgaacccccacgtccgtaaggacactaacacctgaagctagcgcgtctaccaattccgccaccttcgcacagtcatcttactttttttgatatcgcctcgtttggtgcgaggggggg < 2:216256‑M2/4‑1 (MQ=255) tGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACAC‑TAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGC‑ACAGTCATATTACTTTTTTTGATATCGTCTCGCTGGGG‑GC‑GA‑‑gggtg‑‑ggggttctcaactcccc > 2:555882/1‑137 (MQ=17) tggtgcgaggggggggacttgaacccccacgtccgtaaggacactaacacctgaagctagcgcgtctaccaattccgccaccttcgcacagtcatcttactttttttgatatcgcctcgtttggtgcgaggGGGGG‑‑GGGACTTGAAccccc > 1:11589‑M2/132‑151 (MQ=255) gtgcgaggggggggacttgaacccccacgtccgtaaggacactaacacctgaagctagcgcgtctaccaattccgccaccttcgcacagtcatcttactttttttgatatcgcctcgtttggtgcgaggGGGGG‑‑GGGACTTGAACCCCCAc < 1:139961‑M2/22‑1 (MQ=255) gtgcgaggggggggacttgaacccccacgtccgtaaggacactaacacctgaagctagcgcgtctaccaattccgccaccttcgcacagtcatcttactttttttgatatcgcctcgtttggtgcgaggGGGGG‑‑GGGACTTGAACCCCCAc < 2:191301‑M2/22‑1 (MQ=255) tgcgaggggggggacttgaacccccacgtccgtaaggacactaacacctgaagctagcgcgtctaccaattccgccaccttcgcacagtcatcttactttttttgatatcgcctcgtttggtgcgaggGGGGG‑‑GGGACTTGAACCCCCACg > 1:517939‑M2/129‑151 (MQ=255) aGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACAC‑TAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGC‑ACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGT‑GC‑GAG‑GGGGG‑‑GGGACTTGAACCCCCACGTCCGt < 1:646824/151‑1 (MQ=255) ggggggggacttgaacccccacgtccgtaaggacactaacacctgaagctagcgcgtctaccaattccgccaccttcgcacagtcatcttactttttttgatatcgcctcgtttggtgcgaggGGGGG‑‑GGGACTTGAACCCCCACGTCCGt > 1:385297‑M2/124‑151 (MQ=255) gggacttgaacccccacgtccgtaaggacactaacacctgaagctagcgcgtctaccaattccgccaccttcgcacagtcatcttactttttttgatatcgcctcgtttggtgcgaggGGGGG‑‑GGGACTTGAACCCCCACGTCCGTAAGa > 1:582349‑M2/119‑150 (MQ=255) aacccccacgtccgtaaggacactaacacctgaagctagcgcgtctaccaattccgccaccttcgcacagtcatcttactttttttgatatcgcctcgtttggtgcgaggGGGGG‑‑GGGACTTGAACCCCCACGTCCGTAAGAACACTAaca < 1:466535‑M2/41‑1 (MQ=255) caacttcggaaGGACACTTAACACC‑GAAAGTAGGGCAGTTACCAAATCCGGCACCGTCGCAACGGTCACTTAACTTTTTTTGA‑ATCGGCCCGTTTGGTGGCGGG‑‑GGGGG‑‑GGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGaa < 2:445051/142‑1 (MQ=9) cacgtccgtaaggacactaacacctgaagctagcgcgtctaccaattccgccaccttcgcacagtcatcttactttttttgatatcgcctcgtttggtgcgaggGGGGG‑‑GGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGaa < 1:680241‑M2/47‑1 (MQ=255) ccGTAATGACAC‑TAACATCTGATGCTAGCACGTCTACCAAGTCCGGCACCTGCGC‑ACAGACATCTTGCTTTTTTTGCTATCGCATCGTTTGGT‑GC‑GAGGGGGGG‑‑GGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAg < 2:643389/151‑1 (MQ=21) cgtaaggacactaacacctgaagctagcgcgtctaccaattccgccaccttcgcacagtcatcttactttttttgatatcgcctcgtttggtgcgaggGGGGG‑‑GGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAgc < 1:23309‑M2/53‑1 (MQ=255) acactaacacctgaagctagcgcgtctaccaattccgccaccttcgcacagtcatcttactttttttgatatcgcctcgtttggtgcgaggGGGGG‑‑GGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTa < 1:576155‑M2/60‑1 (MQ=255) acCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGC‑ACAGTAATCTTACTTTTTTTGATATCGCCTCGTTAGAT‑GC‑GA‑‑GGGGGGTGGGACTTTAATCCCCACGTTTGAAAGAACACTAACTCCTGAACTTAGCTCGTCTACAAATTcc > 1:370460/1‑151 (MQ=25) tagcataattACCAATTCCCCCAGCTGCGC‑AAAGTCAGCTTACATTTTTTGATATCGCATCATTTTTT‑TC‑GAGGGGGGG‑‑GGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGc < 2:42559/135‑1 (MQ=17) agctagcgcgtctaccaattccgccaccttcgcacagtcatcttactttttttgatatcgcctcgtttggtgcgaggGGGGG‑‑GGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCAcc > 1:597095‑M2/78‑151 (MQ=255) tagcgcgtctaccaattccgccggcttcgcacagtaatcttactttttttgatatcgcctcgttttgtgcgaggGGGGG‑‑GGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCt < 2:288563‑M2/75‑1 (MQ=255) gtctaccaattccgccaccttcgcacagtcatcttactttttttgatatcgcctcgtttggtgcgaggGGGGG‑‑GGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGccc > 1:343172‑M2/69‑149 (MQ=255) cgccaccttcgcacagtcatcttactttttttgatatcgcctcgtttggtgcgaggGGGGG‑‑GGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAatat < 1:20318‑M2/95‑1 (MQ=255) cGC‑ACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGT‑GC‑GAG‑GGGGG‑‑GGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGt < 1:250088/150‑1 (MQ=255) tcgcacagtcatcttactttttttgatatcgcctcgtttggtgcgaggGGGGG‑‑GGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTg < 1:311393‑M2/102‑1 (MQ=255) tcgcacagtcatcttactctgtatgatatcgccacgtttggtgcgagaGGGGG‑‑GGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCTCCACCTTCGCCCAGTGCGAGCa < 2:179350‑M2/91‑1 (MQ=255) cgcacagtcatcttactttttttgatatcgcctcgtttggtgcgagggGGGGG‑‑GGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTgg > 2:583211‑M2/49‑151 (MQ=255) gcacagtcatcttactttttttgatatcgcctcgtttggtgcgaggGGGGG‑‑GGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGAGGtt > 2:319881‑M2/47‑151 (MQ=255) gtcatcttactttttttgatatcgcctcgtttggtgcgaggGGGGG‑‑GGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTgg < 1:473058‑M2/110‑1 (MQ=255) tcatcttactttttttgatatcgcctcgtttggtgcgaggGGGGG‑‑GGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTgg > 1:432041‑M2/41‑150 (MQ=255) ctttttttgatatcgcctcgtttggtgcgagggGGGGG‑‑GGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGA‑gg < 2:586323‑M2/117‑1 (MQ=255) tttttgatatcgcctcgtttggggcgaggGGGGG‑‑GGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGA‑gggggg < 2:451613‑M2/121‑1 (MQ=255) tgatatcgcctcgtttggtgcgaggGGGGG‑‑GGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGA‑GGGGGGGGGCt > 2:289866‑M2/26‑151 (MQ=255) cGCCTCGTTTGGT‑GC‑GAGGGGGGG‑‑GGGACTTGAACCCCCACGTCCGGAAGGACACTAACAACTGAAGCTAGCGCGTCTACCAATTCCGCCCCCTTCGCCCAGTGCGAACCATTTCAACGTGGTTTTTTGAGCGA‑gggggggggggcttga > 2:584746/1‑142 (MQ=17) tcgcctcgtttggtgcgaggGGGGG‑‑GGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGA‑GGGGGGGGGCTTGAAc > 1:607080‑M2/21‑151 (MQ=255) cctcgtttggtgcgaggGGGGG‑‑GGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGA‑GGGGGGGGGCTTGAAcccc > 1:538170‑M2/18‑151 (MQ=255) tggtgcgaggGGGGG‑‑GGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGA‑GGGGGGGGGCTTGAACCCCCACGTcc > 1:179456‑M2/11‑151 (MQ=255) tggtgcgaggGGGGG‑‑GGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGA‑GGGGGGGGGCTGGAACCCCCACGTcc > 2:652661‑M2/11‑151 (MQ=255) gtgcgaggGGGGG‑‑GGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGGGCTTGAACCCCCACGTcc < 2:150262‑M2/142‑1 (MQ=255) gaggGGGGG‑‑GGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATGCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGA‑GGGGGGGGGCTTGAACCCCCACGTCCGTAAgg < 1:157817‑M2/147‑1 (MQ=255) ggGGGGG‑‑GGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGGGCTTGAACCCCCACGTCCGTAAgg > 1:150302‑M2/3‑150 (MQ=255) ggggg‑‑gggACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGA‑GGGGGGGGGCTTGAACCCCCACGTCCGTAAGGacac > 1:457490/1‑151 (MQ=255) | GAAGTAAAGATAATTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACAC‑TAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGC‑ACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGT‑GC‑GA‑‑GGGGG‑‑GGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACAC > NC_000913/4606065‑4606358 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |