| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 381,211 | Δ1,383 bp | [yaiX]–[yaiX] | [yaiX], insC1, insD1, [yaiX] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 381211 | 382593 | 1383 | 48 [0] | [0] 47 | [yaiX]–[yaiX] | [yaiX], insC1, insD1, [yaiX] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 381210 | 0 (0.000) | 43 (1.040) | 39/286 | 0.2 | 100% | pseudogene (51/417 nt) | yaiX | pseudogene, interrupted by IS2A; hexapeptide transferase superfamily; putative transferase |
| ? | NC_000913 | 382594 = | 0 (0.000) | pseudogene (279/282 nt) | yaiX | pseudogene, interrupted by IS2A; hexapeptide transferase superfamily; putative transferase | |||||
GGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTGGTCTGCAATCTGAATATTTTTCTCTTTAACATTA > NC_000913/382459‑382741 | cgatgattactggtacgtacttgtgcgcctaaatatgcctggtttgcaactaccgagtcggcaataaaacattgcggaccaatcgttgcttccgcttcaataaccgcatttttaatctcggtggcaaaaccaattACCTATCAGGCAGttt < 2:188024‑M2/16‑1 (MQ=255) ttactggtacgtacttgtgcgcctaaatatgcctggtttgcaactaccgagtcggcaataaaacattgcggaccaatcgttgcttccgcttcaataaccgcatttttaatctcggtggcaaaaccaattACCTATCAGGCAGTTTGCGcc > 1:325597‑M2/130‑150 (MQ=255) gtacgtacttgtgcgcctaaatatgcctggtttgcaactaccgagtcggcaataaaacattgcggaccaatcgttgcttccgcttcaataaccgcatttttaatctcggtggcaaaaccaattACCTATCAGGCAGTTTGCGCCAATCACt > 1:597837‑M2/124‑151 (MQ=255) acgtacttgtgcgcctaaatatgcctggtttgcaactaccgagtcggcaataaaacattgcggaccaatcgttgcttccgcttcaataaccgcatttttaatctcggtggcaaaaccaattACCTATCAGGCAGTTTGCGCCAATCACTa < 2:385690‑M2/29‑1 (MQ=255) acgtacttgtgcgcctaaatatgcctggtttgcaactaccgagtcggcaataaaacattgcggaccaatcgttgcttccgcttcaataaccgcatttttaatctcggtggcaaaaccaattACCTATCAGGCAGTTTGCGCCAATCACTAc > 2:207816‑M2/122‑151 (MQ=255) cgtacttgtgcgcctaaatatgcctggtttgcaactaccgagtcggcaataaaacattgcggaccaatcgttgcttccgcttcaataaccgcatttttaatctcggtggcaaaaccaattACCTATCAGGCAGTTTGCGCCAATCACTAcc < 1:30249‑M2/31‑1 (MQ=255) cttgtgcgcctaaatatgcctggtttgcaactaccgagtcggcaataaaacattgcggaccaatcgttgcttccgcttcaataaccgcatttttaatctcggtggcaaaaccaattACCTATCAGGCAGTTTGCGCCAATCACTACCgg < 1:662408‑M2/33‑1 (MQ=255) ttgtgcgcctaaatatgcctggtttgcaactaccgagtcggcaataaaacattgcggaccaatcgttgcttccgcttcaataaccgcatttttaatctcggtggcaaaaccaattACCTATCAGGCAGTTTGCGCCAATCACTACCGGAcc > 2:34787‑M2/116‑151 (MQ=255) gtgcgcctaaatatgcctggtttgcaactaccgagtcggcaataaaacattgcggaccaatcgttgcttccgcttcaataaccgcatttttaatctcggtggcaaaaccaattACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCt < 2:440358‑M2/38‑1 (MQ=255) gcgcctaaatatgcctggtttgcaactaccgagtcggcaataaaacattgcggaccaatcgttgcttccgcttcaataaccgcatttttaatctcggtggcaaaaccaattACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTg < 2:70771‑M2/39‑1 (MQ=255) gcctaaatatgcctggtttgcaactaccgagtcggcaataaaacattgcggaccaatcgttgcttccgcttcaataaccgcatttttaatctcggtggcaaaaccaattACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAAt < 1:20913‑M2/42‑1 (MQ=255) cctaaatatgcctggtttgcaactaccgagtcggcaataaaacattgcggaccaatcgttgcttccgcttcaataaccgcatttttaatctcggtggcaaaaccaattACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAAt < 2:28757‑M2/42‑1 (MQ=255) aaatatgcctggtttgcaactaccgagtcggcaataaaacattgcggaccaatcgttgcttccgcttcaataaccgcatttttaatctcggtggcaaaaccaattACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATaa < 2:65218‑M2/44‑1 (MQ=255) gtttgcaactaccgagtcggcaataaaacattgcggaccaatcgttgcttccgcttcaataaccgcatttttaatctcggtggcaaaaccaattACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGAc > 2:177662‑M2/95‑150 (MQ=255) actaccgagtcggcaataaaacattgcggaccaatcgttgcttccgcttcaataaccgcatttttaatctcggtggcaaaaccaattACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACgg > 1:218119‑M2/88‑151 (MQ=255) gcaataaaacattgcggaccaatcgttgcttccgcttcaataaccgcatttttaatctcggtggcaaaaccaattACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCg < 1:671749‑M2/76‑1 (MQ=255) ataaaacattgcggaccaatcgttgcttccgcttcaataaccgcatttttaatctcggtggcaaaaccaattACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATa < 2:516971‑M2/79‑1 (MQ=255) aaaacattgcggaccaatcgttgcttccgcttcaataaccgcatttttaatctcggtggcaaaaccaattACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATaac > 1:329023‑M2/71‑151 (MQ=255) aaaacattgcggaccaatcgttgcttccgcttcaataaccgcatttttaatctcggtggcaaaaccaattACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATaa < 1:590499‑M2/80‑1 (MQ=255) aacattgcggaccaatcgttgcttccgcttcaataaccgcatttttaatctcggtggcaaaaccaattACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATaaca > 1:301183‑M2/69‑150 (MQ=255) gcggaccaatcgttgcttccgcttcaataaccgcatttttaatctcggtggcaaaaccaattACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCa < 2:601495‑M2/88‑1 (MQ=255) cgttgcttccgcttcaataaccgcatttttaatctcggtggcaaaaccaattACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTtc > 2:307091‑M2/53‑151 (MQ=255) gcttccgcttcaataaccgcatttttaatctcggtggcaaaaccaattACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTtcatc > 1:595533‑M2/49‑150 (MQ=255) cttccgcttcaataaccgcatttttaatcgcggtggcaaaaccaattCCCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTtcatca < 2:1744‑M2/103‑1 (MQ=255) tcaataaccgcatttttaatctcggtggcaaaaccaattACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTAcc > 1:235561‑M2/40‑151 (MQ=255) caataaccgcatttttaatctcggtggcaaaaccaattACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCt > 1:54754‑M2/39‑151 (MQ=255) caataaccgcatttttaatctcggtggcaaaaccaattACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCt < 1:461439‑M2/113‑1 (MQ=255) caataaccgcatttttaatctcggtggcaaaaccaattACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCt < 2:310087‑M2/113‑1 (MQ=255) taaccgcatttttaatctcggtggcaaaaccaattACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTGGt > 1:261229‑M2/36‑151 (MQ=255) taaccgcatttttaatctcggtggcaaaaccaattACCTATCAGGCAGTTTGCGCCAATCACTAACGGACCCTGAATAACGGCACCATGACAAATACGGGTATTAGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTgg > 2:145968‑M2/36‑150 (MQ=255) ccgcatttttaatctcggtggcaaaaccaattACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTGGTCTg > 1:437266‑M2/33‑151 (MQ=255) ccgcatttttaatctcggtggcaaaaccaattACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTGGTCTg > 2:46811‑M2/33‑151 (MQ=255) catttttaatctcgttggcaaaaccaattACCTATCAGGCATTTTGCGCCAATCACTACCGGACCCTGAATAACGGCTCCATGATAAATACGTGTATTCGCGCCGATAACATCTTCACCTGCAGTTTCATCAATAATTACCTGGTCt < 2:428447‑M2/118‑1 (MQ=255) catttttaatctcggtggcaaaaccaattACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTGGTCTGCaa < 2:326120‑M2/122‑1 (MQ=255) ttttaatctcggtggcaaaaccaattACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTGGTCTGCAATCt > 2:122433‑M2/27‑151 (MQ=255) ttaatctcggtggcaaaaccaattACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTGGTCTGCAATCTg < 1:125868‑M2/126‑1 (MQ=255) cggtggcaaaaccaattACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTGGTCTGCAATCTGAATAtt < 2:6573‑M2/132‑1 (MQ=255) tggcaaaaccaattACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTGGTCTGCAATCTGAATATTTTtct > 2:541330‑M2/15‑151 (MQ=255) ggcaaaaccaattACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTGGTCTGCAATCTGAATATTTTtctc > 2:312648‑M2/14‑151 (MQ=255) ggcaaaaccaattACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTGGTCTGCAATCTGAATATTTTtctc < 1:158997‑M2/138‑1 (MQ=255) gcaaaaccaattACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTGCCTGGTCTGCAATCTGAATATTTTtct < 1:177667‑M2/137‑1 (MQ=255) gcaaaaccaattACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTGGTCTGCAATCTGAATATTTTTctct < 1:87583‑M2/139‑1 (MQ=255) accaattACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTGGTCTGCAATCTGAATATTTTTCTCTTTAAc > 1:39627‑M2/8‑151 (MQ=255) ccaattACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTGGTCTGCAATCTGAATATTTTTCTCTTTAACa < 2:108858‑M2/145‑1 (MQ=255) ccaattACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTGGTCTGCAATCTGAATATTTTTCTCTTTAACa < 1:303431‑M2/145‑1 (MQ=255) caattACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTGGTCTGCAATCTGAATATTTTTCTCTTTAACAt < 1:11576‑M2/146‑1 (MQ=255) attACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTGGTCTGCAATCTGAATATTTTTCTCTTTAACATTa < 1:171074‑M2/148‑1 (MQ=255) | GGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTGGTCTGCAATCTGAATATTTTTCTCTTTAACATTA > NC_000913/382459‑382741 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |