New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP006584 3513901 =43 (0.500)44 (0.540)
+TCGGATAAGGCGTTT		 39/556 1.7 52.5% intergenic (‑77/+262) tldD/LY180_16725 protease TldD/membrane protein
?CP006584 = 3514068 41 (0.470)intergenic (‑244/+95) tldD/LY180_16725 protease TldD/membrane protein

CCAACCGCGTAAAGAAAAAGCGCAATGATTTGACGAGGGCGCGTAATTGCCCCAATCTCATAGGATAATCGTTGCCAAAGGCCAACGAGCCAGAACATAACCGTAGGTCGGATAGGGCGTTCACGCCGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACGGAACATAACCGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACCGGAACATAACCGTAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP006584/3514190‑3513901
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACGC‑CGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACCGGAACATAACCGTAGGCTGGATAGGGCGTTCACGCCGCATCCGGCAGCCGTAAAAAATCCTCTACTGCAGTAACTAACGAGTAGCAAAAACGATGAGTCTTAACCTGGTAAGTGAACAATTGCTAGCGGCGAACGGCCTGA  <  CP006584/3514068‑3513776
                                                                                                                                                                                                                                                                                                  |||||||||||||||                                                                                                                                                                                                                                                                                                       
ctAACCGCGTAAAGAAAAAGCGCAATGATTTGACGAGGGCGCGTAATTGCCCCAATCTCATAGGATAATCGTTGCCAAAGGCCAACGAGCCAGAACATAACCGTAGGTCGGATAGGGCGTTCACGCCGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACGGAACATAACCGTAGGTCGGATAAGGCGTTTACGCCGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAG                                                                                                                                                                                                                                                                                                               >  1:319422/3‑298
CCAACCGCGTAAAGAAAAAGCGCAATGATTTGACGAGGGCGCGTAATTGCCCCAATCTCATAGGATAATCGTTGCCAAAGGCCAACGAGCCAGAACATAACCGTAGGTCGGATAGGGCGTTCACGCCGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACGGAACATAACCGTAGGTCGGATAAGGCGTTTACGCCGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAG                                                                                                                                                                                                                                                                                                               >  1:319414/1‑298
 CAACCGCGTAAAGAAAAAGCGCAATGATTTGACGAGGGCGCGTAATTGCCCCAATCTCATAGGATAATCGTTGCCAAAGGCCAACGAGCCAGAACATAACCGTAGGTCGGATAGGGCGTTCACGCCGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACGGAACATAACCGTAGGTCGGATAAGGCGTTTACGCCGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGG                                                                                                                                                                                                                                                                                                              >  1:243885/1‑298
  aacggggaAAAGAAAAGGCGCAATGTTTGGACAAGGCGGGGTATTTCCCCCATTCTCATAGAATAACCG‑TGGCAAAGGCCAACGAGCCAGAACATAACCGTAGGTCGGATAGGGCGTTCACGCCGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACGGAACATAACCGTAGGTCGGATAAGGCGTTTACGCCGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCG                                                                                                                                                                                                                                                                                                            <  1:313365/290‑1
      GCGTAAAGAAAAAGCGCAATGATTTGACGAGGGCGCGTAATTGCCCCAATCTCATAGGATAATCGTTGCCAAAGGCCAACGAGCCAGAACATAACCGTAGGTCGGATAGGGCGTTCACGCCGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACGGAACATAACCGTAGGTCGGATAAGGCGTTTACGCCGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTT                                                                                                                                                                                                                                                                                                         <  1:634164/298‑1
        GTAAAGAAAAAGCGCAATGATTTGACGAGGGCGCGTAATTGCCCCAATCTCATAGGATAATCGTTGCCAAAGGCCAACGAGCCAGAACATAACCGTAGGTCGGATAGGGCGTTCACGCCGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACGGAACATAACCGTAGGTCGGATAAGGCGTTTACGCCGCATCCGTCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTAC                                                                                                                                                                                                                                                                                                       >  1:278076/1‑298
         TAAAGAAAAAGCGCAATGATTTGACGAGGGCGCGTAATTGCCCCAATCTCATAGGATAATCGTTGCCAAAGGCCAACGAGCCAGAACATAACCGTAGGTCGGATAGGGCGTTCACGCCGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACGGAACATAACCGTAGGTCGGATAAGGCGTTTACGCCGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTACG                                                                                                                                                                                                                                                                                                      >  1:317747/1‑298
                          ggttgggCGAGCGCGGGAAATTGCCCCAATCCGATAGGTTAATCGTTGCCAACGCCAAACCGGCCAGAGCATAGCCGAAGGGCGGATAGGGGGTTCACGCCGCCTCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACGGAACATAACCGTAGGTCGGATAAGGCGTTTACGCCGCATCCGTCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTACGC‑CGCATCCGACAGCCGT                                                                                                                                                                                                                                                                                    <  2:278076/291‑1
                                    cgccgatcAATTGCCCCAAACTCATAGGATAATCGTTGCCAAAGGCCAACGAGCCAGAACATAACCGTAGGTCGGATAGGGCGTTCACGCCGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACGGAACATAACCGTAGGTCGGATAAGGCGTTTACGCCGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTACGC‑CGCATCCGACAGCCGTTGCCTGATGC                                                                                                                                                                                                                                                                          <  1:285220/290‑1
                                      GCGCGTAATTGCCCCAATCTCATAGGATAATCGTTGCCAAAGGCCAACGAGCCAGAACATAACCGTAGGTCGGATAGGGCGTTCACGCCGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACGGAACATAACCGTAGGTCGGATAAGGCATTTACGCCGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTACGC‑CGCATCCGACAGCCGTTGCCTGATGCGA                                                                                                                                                                                                                                                                        <  1:188064/298‑1
                                           TAATTGCCCCAATCTCATAGGATAATCGTTGCCAAAGGCCAACGAGCCAGAACATAACCGTAGGTCGGATAGGGCGTTCACGCCGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACGGAACATAACCGTAGGTCGGATAAGGCGTTTACGCCGCATCCGGCAGCCGTTTCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTACGC‑CGCATCCGACAGCCGTTGCCTGATGCGACcatg                                                                                                                                                                                                                                                                   >  1:109072/1‑294
                                           TAATTGCCCCAATCTCATAGGATAATCGTTGCCAAAGGCCAACGAGCCAGAACATAACCGTAGGTCGGATAGGGCGTTCACGCCGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACGGAACATAACCGTAGGTCGGATAAGGCGTTTACGCCGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTACGC‑CGCATCCGACAGCCGTTGCCTGATGCGACGCTG                                                                                                                                                                                                                                                                   <  1:132943/298‑1
                                                 CCCCAATCTCATAGGATAATCGTTGCCAAAGGCCAACGAGCCAGAACATAACCGTAGGTCGGATAGGGCGTTCACGCCGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACGGAACATAACCGTAGGTCGGATAAGGCGTTTACGCCGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTACGC‑CGCATCCGACAGCCGTTGCCTGATGCGACGCTGTGCGTC                                                                                                                                                                                                                                                             <  1:600965/298‑1
                                                 CCCCAATCTCATAGGATAATCGTTGCCAAAGGCCAACGAGCCAGAACATAACCGTAGGTCGGATAGGGCGTTCACGCCGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACGGAACATAACCGTAGGTCGGATAAGGCGTTTACACCGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTACGC‑CGCATCCGACAGCCGTTGCCTGATGCGACGCTGTGCGTC                                                                                                                                                                                                                                                             >  1:459288/1‑298
                                                 CCCCAATCTCATAGGATAATCGTTGCCAAAGGCCAACGAGCCAGAACATAACCGTAGGTCGGATAGGGCGTTCACGCCGCATCCGGCAGCCGTTGCCCGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACGGAACATAACCGTAGGTCGGATAAGGCGTTTACGCCGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTACGC‑CGCATCCGACAGCCGTTGCCTGATGCGACGCTGTGCGTC                                                                                                                                                                                                                                                             <  1:617296/298‑1
                                                                  AATCGTTGCCAAAGGCCAACGAGCCAGAACATAACCGTAGGTCGGATAGGGCGTTCACGCCGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACGGAACATAACCGTAGGTCGGATAAGGCGTTTACGCCGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTACGC‑CGCATCCGACAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑C                                                                                                                                                                                                                                           >  1:184697/1‑298
                                                                            AAAGGCCAACGAGCCAGAACATAACCGTAGGTCGGATAGGGCGTTCACGCCGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACGGAACATAACCGTAGGTCGGATAAGGCGTTTACGCCGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTACGC‑CGCATCCGACAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACCGGAACATAA                                                                                                                                                                                                                                  >  1:60125/1‑298
                                                                                         CCAGAACATAACCGTAGGTCGGATAGGGCGTTCACGCCGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACGGAACATAACCGTAGGTCGGATAAGGCGTTTACGCCGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTACGC‑CGCATCCGACAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACCGGAACATAACCGTAGGCTGGAT                                                                                                                                                                                                                     >  1:619442/1‑298
                                                                                            GAACATAACCGTAGGTCGGATAGGGCGTTCACGCCGCATCCGGCAGCCGTGGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACGGAACATAACCGTAGGTCGGATAAGGCGTTTACGCCGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTACGC‑CGCATCCGACAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACCGGAACATAACCGTAGGCTGGATAgg                                                                                                                                                                                                                  <  1:9605/298‑3
                                                                                                          GTCGGATAGGGCGTTCACGCCGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACGGAACATAACCGTAGGTCGGATAAGGCGTTTACGCCGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTACGC‑CGCATCCGACAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACCGGAACATAACCGTAGGCTGGATAGGGCGTTCACGCCGCA                                                                                                                                                                                                    <  1:459302/298‑1
                                                                                                                               GCATCCGGCAGCCGTTGCCTGATGCGACACTGTGCGTCTTATCAGGCCTACAAACGGAACATAACCGTAGGTCGGATAAGGCGTTTACGCCGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTACGC‑CGCATCCGACAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACCGGAACATAACCGTAGGCTGGATAGGGCGTTCACGCCGCATCCGGCAGCCGTaaaaaatcc                                                                                                                                                                               >  1:322420/1‑289
                                                                                                                                 ATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCTTCTTATCAGGCCTACAAACGGAACATAACCGTAGGTCGGATAAGGCGTTTACGCCGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTACGC‑CGCATCCGACAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACCGGAACATAACCGTAGGCTGGATAGGGCGTTCACGCCGCATCCGGCAGCCGTaaaaaatcctc                                                                                                                                                                             <  1:763405/298‑12
                                                                                                                                   CCGGCATCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACGGAACATAACCGTAGGTCGGATAAGGCGTTTCCGCCGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTACGC‑CGCATCCGACAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACCGGAACATAACCGTAGGCTGGATAGGGCGTTCACGCCGCATCCGGCAGCCGTaaaaaatcctcta                                                                                                                                                                           <  1:469014/298‑14
                                                                                                                                                                         aggccaacgagccaGAACATAACCGTAGGTCGGATAGGGCGTTCACGCCGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTACGC‑CGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACCGGAACATAACC                                                                                                                                    >  1:52520/15‑298
                                                                                                                                                                                             AACCGTAGGTCGGATAGGGCGTTCACGCCGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTACGC‑CGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCCGGCCTACAAA‑CCGAACATTACCCTAGGTCTGATAAGGCGGTTACCCCCCATCCGAAAGCCCTTTACTGATTCGCCGCTGTGCGTCTTATCAGGCCTACAAAACGGAACAAAACCGCAAGCATGCTAGGGCtgtt                                                                                                                >  2:350445/1‑294
                                                                                                                                                                                                          acagggcgtgccCGCAGCCTCCGGCAGGCGTGGTCGGATGCGACGCTGGGCGTCGTACCAGGCCTCCAAA‑CGGGACATAACGGGAGGTCGGATAAGGCGTTTACGC‑CGCAGCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACCGGAACATAACCGTAGGCTGGATAGGGCGTTCACGCCGCATCCGG                                                                                                   <  2:262008/286‑1
                                                                                                                                                                                                                                ggCAGCCGTTCCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTACGC‑CGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACCGGAACATAACCGTAGGCTGGATAGGGCGTTCACGCCGCATCCGGCAGCCGTAAAAAATCCTCTACT                                                                             <  1:748808/296‑1
                                                                                                                                                                                                                                     CCGTTGCCTGAGGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTACGC‑CGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACCGGAACATAACCGTAGGCTGGATAGGGCGTTCACGCCGCATCCGGCAGCCGTAAAAAATCCTCTACTGCAGT                                                                        <  1:387528/298‑1
                                                                                                                                                                                                                                       GTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTACGC‑CGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACCGGAACATAACCGTAGGCTGGATAGGGCGTTCACGCCGCATCCGGCAGCCGTAAAAAATCCTCTACTGCAGTAA                                                                      >  1:130234/1‑298
                                                                                                                                                                                                                                        TTGCCTGATGCGACGCTGTGCGACTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTACGC‑CGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACCGGAACATAACCGTAGGCTGGATAGGGCGTTCACGCCGCATCCGGCAGCCGTAAAAAATCCTCTACTGCAGTAAC                                                                     <  1:711439/298‑1
                                                                                                                                                                                                                                          GCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTACGC‑CGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACCGGAACATAACCGTAGGCTGGATAGGGCGTTCACGCCGCATCCGGCAGCCGTAAAAAATCCTCTACTGCAGTAACTA                                                                   <  1:168596/298‑1
                                                                                                                                                                                                                                           CCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTACGC‑CGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACCGGAACATAACCGTAGGCTGGATAGGGCGTTCACGCCGCATCCGGCAGCCGTAAAAAATCCTCTACTGCAGTAACTAA                                                                  >  1:391227/1‑298
                                                                                                                                                                                                                                                   ggtGCTGTGCTTGTTAGCAGGCCTACAAA‑CGGAACCTACGCGTAGGCCGGATAAGGCTGTTGCGC‑CGCATCCGGCAGCCGGTGCCTGATGCGGCGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGACAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACCGGAACATAACCGTAGGCTGGATAGGGCGTTCACGCCGCATCCGGCAGCCGTAAAAAATCCTCTACTGCAGTAACTAACGAGTAGC                                                          <  2:317747/295‑1
                                                                                                                                                                                                                                                   GACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTACGC‑CGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACCGGAACATAACCGTAGGCTGGATAGGGCGTTCACGCCGCATCCGGCAGCCGTAAAAAATCCTCTACTGCAGTAACTAACGAGTAGC                                                          >  1:484913/1‑298
                                                                                                                                                                                                                                                          TGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTACGC‑CGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACCGGAACATAACCGTAGGCTGGATAGGGCGTTCACGCCGCATCAGGCAGCCGTAAAAAATCCTCTAATGCAGTAACTAACGATTAGCAAAAAag                                                   >  1:382315/1‑296
                                                                                                                                                                                                                                                                  ATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTACGC‑CGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACCGGAACATAACCGTAGGCTGGATAGGGCGTTCACGCCGCATCCGGCAGCCGTAAAAAATCCTCTACTGCAGTAACTAACGAGTAGCAAAAACGATGAGTCT                                           <  1:761955/298‑1
                                                                                                                                                                                                                                                                      GGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTACGC‑CGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACCGGAACATAACCGTAGGCTGGATAGGGCGTTCACGCCGCATCCGGCAGCCGTAAAAAATCCTCTACTGCAGTAACTAACGAGTAGCAAAAACGATGAGTCTTAAC                                       <  1:621956/298‑1
                                                                                                                                                                                                                                                                         cctacgacgGGAAAATAACCGGAGGTGGGAGAAGGGGTTCGCCG‑CGCATCCGGCAGCCGGTGCCGGGTGCGACGCGGTGCGTCTTAACAGGCCTAAAAA‑CGGAACATAACCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGACAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACCGGAACATAACCGTAGGCTGGATAGGGCGTTCACGCCGCATCCGGCAGCCGTAAAAAATCCTCTACTGCAGTAACTAACGAGTAGCAAAAACGATGAGTCTTAACCT                                     <  2:319422/289‑1
                                                                                                                                                                                                                                                                                aCGGAACATAACCGTAGGTCGGATAAGGTGTTTACGC‑CGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACCGGAACATAACCGTAGGCTGGATAGGGCGTTCACGCCGCATCCGGCAGCCGTAAAAAATCCTCTACTGCAGTAACTAACGAGTAGCAAAAACGATGAGTCTTAACCTGGTAAGT                              <  1:574915/297‑1
                                                                                                                                                                                                                                                                                aCGGAACATAACCGTAGGTCGGATAAGGCGTTTACGC‑CGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACCGGAACATAACCGTAGGCTGGATAGGGCGTTCACGCCGCATCCGGCAGCCGTAAAAAATCCTCTACTGCAGTAACTAACGAGTAGCAAAAACGATGAGTCTTAACCTGGTAAGT                              >  1:790229/2‑298
                                                                                                                                                                                                                                                                                   aAACATAACAGTCGGTCGGAGAAGCGGTTGACGC‑CGCCTCCGGCAGGCGTTGCCTGGTGCGACGCTGTGCGTCTTATCAGGCCTCCAAC‑CGGAAAATAACCGTAGGTCGGATAAGGGGTTTCCGCCGCATCCGACAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACCGGAACATAACCGTAGGCTGGATAGGGCGTTCACGCCGCATCCGGCAGCCGTAAAAAATCCTCTACTGCAGTAACTAACGAGTAGCAAAAACGATGAGTCTTAACCTGGTAAGTGAA                           <  2:184697/297‑1
                                                                                                                                                                                                                                                                                   GAACATAACCGTAGGTCGGATAAGGCGTTTACGC‑CGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACCGGAACATAACCGTAGGCTGGATAGGGCGTTCACGCCGCATCCGGCAGCCGTAAAAAATCCTCTACTGCAGTAACTAACGAGTAGCAAAAACGATGAGTCTTAACCTGGTAAGTGAA                           >  1:328836/1‑298
                                                                                                                                                                                                                                                                                       caagCCGTAGGTGGGGTAAGGCGTTT‑CGCTGGCTTCCGGTGACCGTTACCTGAGGTGGCTCGTTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACGTTAGGTCGGATAGTGCGTTTACGCCGCATCCGACAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACCGGAACATAACCGTAGGCTGGATAGGGCGTTCACGCCGCATCCGGCAGCCGTAAAAAATCCTCTACTGCAGTAACTAACGAGTAGCAAAAACGATGAGTCTTAACCTGGTAAGTGAACAAT                       <  2:130234/294‑1
                                                                                                                                                                                                                                                                                       ATAACCGTAGGTCGGATAAGGCGTTTACGC‑CGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACCGGAACATAACCGTAGGCTGGATAGGGCGTTCACGGCGCATCCGGCAGCCGTAAAAAATCCTCTACTGCAGTAACTAACGAGTAGCAAAAACGATGAGTCTTAACCTGGTAAGTGAACAAT                       >  1:187521/1‑298
                                                                                                                                                                                                                                                                                          ACCGTAGGTCGGATAAGGCGTTTACGC‑CGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACCGGAACATAACCGTAGGCTTGATAGGGCGTTCACGCCGCATCCGGCAGCCGTAAAAAATCCTCTACTGCAGTAACTAACGAGTAGCAAAAACGATGAGTCTTAACCTGGTAAGTGAAAAATAGC                    >  1:509434/1‑298
                                                                                                                                                                                                                                                                                             GTAGGTCGGATAAGGCGTTTACGC‑CGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACCGGAACATAACCGTAGGCTGGATAGGGCGTTCACGCCGCATCCGGCAGCCGTAAAAAATCCTCTACTGCAGTAACTAACGAGTAGCAAAAACGATGAGTCTTAACCGGGTAAGTGAACAATTGCTAG                 >  1:614259/1‑298
                                                                                                                                                                                                                                                                                              TAGGTCGGATAAGGCGTTTACGC‑CGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACGGGAACATAACCGTAGGCTGGATAGGGCGTTCACGCCGCATCCGGCAGCCGTAAAAAATCCTCTACTGCAGTAACTAACGAGTAGCAAAAACGATGAGTCTTAACCTGGTAAGTGAACAATTGCTAGC                <  1:641834/298‑1
                                                                                                                                                                                                                                                                                              TAGGTCGGATAAGGCGTTTACGC‑CGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACCGGAACATAACCGTAGGCTGGATAGGGCGTTCACGCCGCATCCGGCAGCCGTAAAAAATCCTCTACTGCAGTAACTAACGAGTAGCAAAAACGATGAGTCTTAACCTGGTAAGTGAACAATTGCTAGC                <  1:308071/298‑1
                                                                                                                                                                                                                                                                                                GGTCGGATAAGGCGTTTACGC‑CGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTACGCCGCCTCCGACAGCCGTTCCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACACACCGGAACATAACCGCAGGCTGGATAGGGCGTTCACGCCGCCTCCGGCACCCGTAAAACCACCTCTACTCCCGCACCCACCCAGTAGCCAAAACGATGCGTCCTAACCTGCTAAGTGCACAATacctgacag              >  2:671567/1‑289
                                                                                                                                                                                                                                                                                                    GGATAAGGCGTTTACGC‑CGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACCGGAACATAACCGTAGGCTGGATAGGGCGTTCACGCCGCATCCGGCAGCCGTAAAAAATCCTCTACTGCAGTAACTAACGAGTAGCAAAAACGATGAGTCTTAACCTGGTAAGTGAACAATTGCTAGCGGCGAA          <  1:192750/298‑1
                                                                                                                                                                                                                                                                                                          GGCGTTTACGC‑CGCATCCGGCAGCCGTTGCCTGATGCGACGCTGGGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACCGGAACATAACCGTAGGCTGGATAGGGCGTTCACGCCGCATCCGGCAGCCGTAAAAAATCCTCTACTGCAGTAACTAACGAGTAGCAAAAACGATGAGTCTTAACCTGGTAAGTGAACAATTGCTAGCGGCGAACGGCCT    <  1:145819/298‑1
                                                                                                                                                                                                                                                                                                            CGTTTACGC‑CGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACCGGAACATAACCGTAGGCTGGATAGGGCGTTCACGCCGCATCCGGCAGCCGTAAAAAATCCTCTACTGCAGTAACTAACGAGTAGCAAAAACGATGAGTCTTAACCTGGTAAGTGAACAATTGCTAGCGGCGAACGGCCTGA  >  1:16643/1‑298
                                                                                                                                                                                                                                                                                                  |||||||||||||||                                                                                                                                                                                                                                                                                                       
CCAACCGCGTAAAGAAAAAGCGCAATGATTTGACGAGGGCGCGTAATTGCCCCAATCTCATAGGATAATCGTTGCCAAAGGCCAACGAGCCAGAACATAACCGTAGGTCGGATAGGGCGTTCACGCCGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACGGAACATAACCGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACCGGAACATAACCGTAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP006584/3514190‑3513901
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACGC‑CGCATCCGGCAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAA‑CGGAACATAACCGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACAGCCGTTGCCTGATGCGACGCTGTGCGTCTTATCAGGCCTACAAACCGGAACATAACCGTAGGCTGGATAGGGCGTTCACGCCGCATCCGGCAGCCGTAAAAAATCCTCTACTGCAGTAACTAACGAGTAGCAAAAACGATGAGTCTTAACCTGGTAAGTGAACAATTGCTAGCGGCGAACGGCCTGA  <  CP006584/3514068‑3513776

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.