New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP006584	1840765 =	6 (0.090)	59 (0.930)	54/588	0.2	90.8%	intergenic (+248/‑63)	LY180_08735/LY180_08740	pyruvate kinase/murein lipoprotein
	?	CP006584	= 1840785	NA (NA)					intergenic (+268/‑43)	LY180_08735/LY180_08740	pyruvate kinase/murein lipoprotein

CACTGGTACCGAGCGGCACTACTAACACCGCATCTGTTCACGTCCTGTAATATTGCTTTTGTGAATTAATTTGTATATCGAAGCGCCCTGATGGGCGCTTTTTTTATTTAATCGATAACCAGAAGCAATAAAAAATCAAATCGGATTTCACTATATAATCTCACTTTATCTAAGATGAATCCGATGGAAGCATCCTGTTTTCTCTCAATTTTTTTATCTAAAACCCAGCGTTCGATGCTTCTTTGAGCGAACGATCAAAAATAAGTGCCTTCCCATCAAAAAAATATTCTCAACATAAAAAACTTTGTGTAATACTTGTAACGCTACATGGAGATTA‑ACTCAATCTAGAGG‑GTATTAATAATGAAAGCTACTAAACTGGTACTGGGCGCGGTAATCCTGGGTTCTACTCTGCTGGCAGGTTGCTCCAGCAACGCTAAAATCGATCAGCTGTCTTCTGACGTTCAGACTCTGAACGCTAAAGTTGACCAGCTGAGCAACGACGTGAACGCAATGCGTTCCGACGTTCAGGCTGCTAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAG  >  CP006584/1840468‑1841061                                                                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                                                                           cACTGGTACCGAGCGGCACTACTAACACCGCATCTGTTCACGTCCTGTAATATTGCTTTTGTGAATTAATTTGTATATCGAAGCGCCCTGATGGGCGCTTTTTTTATTTAATCGATAACCAGAAGCAATAAAAAATCAAATCGGATTTCACTATATAATCTCACTTTATCTAAGATGAATCCGATGGAAGCATCCTGTTTTCTCTCAATTTTTTTATCTAAAACCCAGCGTTCGATGCTTCTTTGAGCGAACGATCAAAAATAAGTGCCTTCCCATCAAAAAAATATTCTCAACATaaa                                                                                                                                                                                                                                                                                                           >  1:209023/1‑299 (MQ=255)    ttgtatacaGCCGCTCTAATCACATCGTATGTGTTCTCGTTATGTGATATTTCTTTTGTGAATTAATTTGTATATCCAAGCACCCTGAGGCGCGCTGTTTTGATTTAATCGATAACCCGAAGCAATAAAAAATCAAAGCAGATTTTACTATATAATCTCATTATATTTACGATTAATCCGATGGAAGCATCCTCGTTTCTCTCAATGTTTTTATCTGAAACGCAGCGTTCAATGCTTATTTGGACGAACGATAAAAAATAAGTGCCTTCCCATCAAAAAAATATTCTCAACAGaaaaaa                                                                                                                                                                                                                                                                                                        <  2:363055/291‑1 (MQ=255)       ccgcatctgttcacgtcctgtaatattgcttttgtgaattaatctgtatatcgacgcgccctgatgggcgctttttttatttaatcgataaccagaagcaataaaaaatcaaatctgatttcactatataatctcactttatctaagatgaatccgatggaagcatcctgttctctctcactttttttctctaaaactcagcgatcgatacttccttgagccaacgatcaaaaataattgacctaccatcaaaaaaatattctcaccatacaacactttgtttaatacttcAAAAACtt                                                                                                                                                                                                                                                                                                     <  2:499993‑M1/8‑1 (MQ=255)        accctactgCATTAGTAACACAGCAGTTGTTGCAGGCCTGTATTATTGCTTTTCTGAATTAATTTGTATATCGAAGCGCCCTGATGGGCGCCTTTTTTATTTACTCGATAACCAGAAGCAATAAAAAATCAAATCGGATTTCACTATATAATCTCACTTTATCTAAGATGAATCCGATGGAAGCATCCTGTTTTCTCTCAATTTTTTTATCTAAAACCCAGCGTTCGATGCTTCTTTGAGCGAACGATCAAAAATAAGTGCCTTCCCATCAAAAAAATATTCTCAACATAAAAAACttt                                                                                                                                                                                                                                                                                                    <  2:538570/291‑1 (MQ=255)          cGAGCGGCACTACTAACACCGCATCTGTTCACGTCCTGTAATATTGCTTTTGTGAATTAATTTGTATATCGAAGCGCCCTGATGGGCGCTTTTTTTATTTAATCGATAACCAGAAGCAATAAAAAATCAAATCGGATTTCACTATATAATCTCACTTTATCTAAGATGAATCCGATGGAAGCATCCTGTTTTCTCTCAATTTTTTTATCTAAAACCCAGCGTTCGATGCTTCTTTGAGCGAACGATCAAAAATAAGTGCCTTCCAATCAAAAAAATATTCTCAACCTAAAAAACttgtt                                                                                                                                                                                                                                                                                                  >  2:561372/1‑296 (MQ=255)            tctgttcacgtcctgtaatattgcttttgtgaattaatttgtatatcgaagcgccctgatgggcgcgttttttatttaatcgataaccagaagcaataaaaaatcaaatcggatttcactatataatctcactttatctaagatgaatccgatggaagcatcctgttttctctcaatttttttatctaaaacccagcgttcgatgcttctttgagcgaacgatcaaaaataagtgccttcccatcaaaaaaatattctcaacataaaaaactttgtgtaatacttgAAAAACTTTgtgt                                                                                                                                                                                                                                                                                                >  2:409400‑M1/287‑299 (MQ=255)                      tcctttaatattgcttttgtgaattaatttgtatatcgaagcgctcttatgggcgctttttttatttaatcgataaccagaagcaataaaaaatcaaatcggatttcactatataatctcactttatctaagatgaatccgatggaagcatcctgttttctctcaatttttttatctaaaacccagcgttcgatgcttctttgagcgaacgatcaaaaataagtgccttcccatcaaaaaaatattctcaacataaaaaactttgtgtaatacttgAAAAACTTTGTGTAATACTTGTa                                                                                                                                                                                                                                                                                      >  1:512341‑M1/277‑299 (MQ=255)                         tgtaatattgcttttgtgaattaatttgtatatcgaagcgccctgatgggcgctttttttatttaatcgataaccagaagcaataaaaaatcaaatcggatttcactatataatctcactttatctaagattaatccgatggaagcatcctgttttctctcaatttttttatctaaaacccagcgttcgatgcttctttgagcgaacgatcaaaaataagtgccttcccatcaaaaaaatattctcaacataaaaaactttgtgtaatacttgAAAAACTTTGTGTAATACTTGTAACg                                                                                                                                                                                                                                                                                   >  1:294155‑M1/274‑299 (MQ=255)                         tgtaatattgcttttgtgaattaatttgtatatcgaagcgccctgatgggcgctttttttatttaatcgataaccagaagcaataaaaaatcaaatcggatttcactatataatctaactttatctaagatgaatccgatggaagcatcatgttttctctcaatttttttatctaaaactcagcttttgatgcttctttgatcgatcgatcaaaaataagtgccttcccgttacaaaaatattctcaaaatataaaaatttgtgtaatacttgAAAAACATTGTGTAAGAATTCTAACg                                                                                                                                                                                                                                                                                   <  2:235398‑M1/26‑1 (MQ=255)                                       ttgtgaattaatttgtatatcgaagcgccctgatgggcgctttttttatttaatcgataaccagaagcaataaaaaatcaaatcggatttcactatataatctcactttatctaagatgaatccgatggaagcatcctgttttctctcaatttttttatctaaaacccagcgttcgatgcttctttgagcgaacgatcaaaaataagtgccttcccatcaaacaatattctcaacataacaaactttgtgtaatactttAACAACTTTGTGTAATCATTGTAACGCTAACTGGATATTa                                                                                                                                                                                                                                                                     <  2:34220‑M1/40‑1 (MQ=255)                                          gaattaatttgtatatcgaagcgccctgatgggcgctttttttatttaatcgataaccagaagcaataaaaaatcaaatcggatttcactatataatctcactttatctaagatgaatccgatggaagcatcctgttttctctcaatttttttatctaaaccccagcgttcgatgcttctttgagcgaacgctcaaaaataagtgccttcccatcaaaaaaatattctcaacataaaaaactttgtttaatacttgAAAAAATTTGTTTAATACTTTTAACGTTACATGGAGATAA‑acc                                                                                                                                                                                                                                                                 <  2:471808‑M1/43‑2 (MQ=255)                                          gaattaatttgtatatcgaagcgccctgatgggcgctttttttatttaatcgataaccagaagcaataaaaaatcaaatcggatttcactatataatctcactttatctaagatgaatccgatggaagcatcctgttttctctcaatttttttatctaaaacccagcgttcgatgcttctttgagcgaacgatcaaaaataagtgccttcacatcaaaaaaatattctcaacataaaaaactttgtgtaatacttgAAAAACTTTGTGTAATACTTGTAACGCTACATGGAGATTA‑ACt                                                                                                                                                                                                                                                                 <  1:363298‑M1/43‑1 (MQ=255)                                                atttgtatatcgaagcgccctgatgggcgctttttttatttaatcgataaccagaagcaataaaaaatcaaatcggatttcactatataatctcactttatctaagatgaatccgatggaagcatcctgttttctctcaatttttttatctaaaacccagcgttcgatgcttctttgagcgaacgatcaaaaataagtgccctcccatcaaaaaaatattctcaacataaaaaactttgtgtaatacttgAAAAACTTTGTTTAATACTTGTAACGCTACATGGAGATTA‑ACTCAATCt                                                                                                                                                                                                                                                           <  1:523311‑M1/49‑1 (MQ=255)                                                      atatcgaagcgccctgatgggcgctttttttatttaatcgataaccagaagcaataaaaaatcaaatcggatttcactatataatctcactttatctaagatgaatccgatggaagcatcctgttttctctcaatttttttatctaaaacccagcgttcgatgcttctttgagcgaacgatcaaaaataagtgccttcccatcaaaaaaatcttctcaacataaaaaactctgtgtaatactggAAAAACTTTGGTTAATACTTGTAACGCTAAATGAAGATTA‑CCACAATCTAAAgg‑g                                                                                                                                                                                                                                                    <  2:208815‑M1/55‑1 (MQ=255)                                                        cTTTTGTGAATTAATTTGTATATCGAAGCGCCCTGATGGGCGCTTTTTTTATTTAATCGATAACCAGAAGCAATAAAAAATCAAATCGGATTTCACTATATAATCTCACTTTATCTAAGATGAATCCGATGGAAGCATCCTGTTTTCTCTCAATTTTTTTATCTAAAACCCAGCGTTCGATGCTTCTTTGAGCGAACGATCAAAAATAAGTGCCTTCCCATCAAAAAAATATTCTCAACATAAAAAACTTTGTGTAATACt                                                                                                                                                                                                                                                                                          >  2:123070/1‑261 (MQ=255)                                                        cTTTTGTGAATTAATTTGTATATCGAAGCGCCCTGATGGGCGCTTTTTTTATTTAATCGATAACCAGAAGCAATAAAAAATCAAATCGGATTTCACTATATAATCTCACTTTATCTAAGATGAATCCGATGGAAGCATCCTGTTTTCTCTCAATTTTTTTATCTAAAACCCAGCGTTCGATGCTTCTTTGAGCGAACGATCAAAAATAAGTGCCTTCCCATCAAAAAAATATTCTCAACATAAAAAACTTTGTGTAATACt                                                                                                                                                                                                                                                                                          <  1:123070/261‑1 (MQ=255)                                                            aagcgccctgatgggcgctttttttatttaatcgataaccagaagcaataaaaaatcaaatcggatttcactatataatctcactttatctaagatgaatccgatggaagcatcctgttttctctcaatttttttatctaaaacccagcgttcgatgcttctttgagcgaacgatcaaaaataagtgccttcccatcaaaaaaatattctcaacataaaaaactttgtgtaatacttgAAAAACTTTGTGTAATACTTGTAACGCTACATGGAGATTA‑ACTCAATCTAGAGG‑GTATtaa                                                                                                                                                                                                                                              <  1:570072‑M1/61‑1 (MQ=255)                                                                       tgggcgctttttttatttaatcgataaccagaagcaataaaaaatcaaatcggttttcactatataatctcactttatctaagatgaatccgatggaagcatcctgttttctctcaatttttttatctaaaacccagcgttcgatgcttctttgagcgaacgatcaaaaataagtgccttcccatcaaaaaattattctcaacataaaaaactttgtgtaataattaAAAAACTTTGTGTAATACTTGTAACGCTACATGGAGCTTA‑ACTCAATCAAGAgg‑gtattaataattaatgta                                                                                                                                                                                                                                   <  2:525054‑M1/72‑8 (MQ=255)                                                                       tgggcgctttttttatttaatcgataaccagaagcaataaaaaatcaaatcggatttcactatataatctcactttatctaagatgaatccgatggaagcatcctgttttctctcaatttttttatctaaaacccagcgttcgatgcttctttgagcgaacgatcaaaaataagtgccttcccatcaaaaaaatattctcaacataaaaaactttgtgtaatacttgAAAAACTTTGTGTAATACTTGTAACGCTACATGGAGATTA‑ACTCAATCTAGAGG‑GTATTAATAATGAAAGct                                                                                                                                                                                                                                   <  1:669564‑M1/72‑1 (MQ=255)                                                                                    tatttaatcgataaccagaagcaataaaaaatcaaatcggatttcactatataatctcactttatctaagatgaatccgatggaagcatcctgttttctctcaatttttttatctaaaacccagcgttcgatgcttctttgagcgaacgatcaaaaataagtgccttcccatcaaaaaaatattctcaacataaaaaactttgtgtaatacttgAAAAACTTTGTGTAATACTTGTAACGCTACATGGAGATTA‑ACTCAATCTAGAGG‑GTATTAATAATGAAAGCTACTAAACTGGTAc                                                                                                                                                                                                                      <  1:301958‑M1/85‑1 (MQ=255)                                                                                       ttaatcgataaccagaagcaataaaaaatcaaatcggatttcactatataatctcactttatctaagatgaatccgatggaagcatcctgttttctctcaatttttttatctaaaacccagcgttcgatgcttctttgagcgaacgatcaaaaataagtgccttcccatcaaaaaaatattctcaacataaaaaactttgtgtaatacttgAAAAACTTTGTGTAATACTTGTAACGCTACATGGAGATTA‑ACTCAATCTAGAGG‑GTATTAATAATGAAAGCTACTAAACTGGTACTgg                                                                                                                                                                                                                   <  1:418591‑M1/88‑1 (MQ=255)                                                                                              ataaccagaagcaataaaaaatcaaatcggatttcactatataatctcactttatctaagatgaatccgatggaagcatcctgttttctctcaatttttttatctaaaacccagcgttcgatgcttctttgagcgaacgatcaaaaataagtgccttcccatcaaaaaaatattctcaacataaaaaactttgtgtaatacttgAAAAACTTTGTGTAATACTTGTAACGCTACATGGAGATTA‑ACTCAATCTAGAGG‑GTATTAATAATGAAAGCTACTAAACTGGTACTGGGCGCGGt                                                                                                                                                                                                            >  1:411317‑M1/205‑299 (MQ=255)                                                                                                aaccagaagcaataaaaaatcaaatcggatttcactatataatctcactttatctaagatgaatccgatggaagcatcctgttttctctcaatttttttatctaaaacccagcgttcgatgcttctttgagcgaacgatcaaaaataagtgccttcccatcaaaaaaatattctcaacataaaaaactttgtgtaatacttgAAAAACTTTGTGTAATACTTGTAACGCTACATGGAGATTA‑ACTCAATCTAGAGG‑GTATTAATAATGAAAGCTACTAAACTGGTACTGGGCGCGGTaa                                                                                                                                                                                                          <  1:130094‑M1/97‑1 (MQ=255)                                                                                                      aagcaataaaaaatcaaatcggatttcactatataatctcactttatctaagatgaatccgatggaagcatcctgttttctctcaatttttttatctaaaacccagcgttcgatgcttctttgagcgaacgatcaaaaataagtgccttcccatcaaaaaaatattctcaacataaaaaactttgtgtaatacttgAAAAACTTTGTGTAATACTTGTAACGCTACATGGAGATTA‑ACTCAATCTAGAGG‑GTATTAATAATGAAAGCTACTAAACTGGTACTGGGCGCGGTAATCCTgg                                                                                                                                                                                                    >  2:555565‑M1/197‑299 (MQ=255)                                                                                                                acatccaatcgtatttcactatattatctcactttatgtcagcataatccggtggaagcctcctgttttctcgcagtttttgtatcgaaaccccatcgttcgatgtttatttgagcaaacgatcaaaaataagtgccttcccatcaaaaaaatatgctcaacgtaaaaaactttgtgtaatacgtgAAAAACTTTGTGTAATACTTTTAACGCTACATTGAGATTA‑GCTCAATCTAGAGG‑GTATTAATAATGAAAGCTACTAAACTGGTACTGGGCGCGGTAATCCTGGGTACTActct                                                                                                                                                                                          >  2:73526‑M1/187‑299 (MQ=255)                                                                                                                          ggatttcactatataatctcactttatctaagatgaatccgatggaagcatcctgttttctctcaatttttttatctaaaacccagcgttcgatgcttctttgagcgaacgatcaaaaataagtgccttcccatcaaaaaaatattctcaacataaaaaactttgtgtaatacttgAAAAACTTTGTGTAATACTTGTAACGCTACATGGAGATTA‑ACTCAATCTAGAGG‑GTATTAATAATGAAAGCTAATAAACTGGTACTGGGATCGGTAATCCTGGGTTATACTATGCTGTCAGGt                                                                                                                                                                                <  2:105909‑M1/123‑1 (MQ=255)                                                                                                                                   tatataatctcactttatctaagatgaatccgatggaagcatcctgttttctctcaatttttttatctaaaacccagcgttcgatgcttctttgagcgaacgatcaaaaataagtgccttcccatcaaaaaaatattctcaacataaaaaactttgtgtaatacttgAAAAACTTTGTGTAATACTTGTAACGCTACATGGAGATTA‑ACTCAATCTAGAGG‑GTATTAATAATGAAAGCTACTAAACTGGTACTGGGCGCGGTAATCCTGGGTTCTACTCTGCTGGCAGGTTGCTCCAGc                                                                                                                                                                       <  2:679154‑M1/132‑1 (MQ=255)                                                                                                                                    atataatctcactttatctaagatgaatccgatggaagcatcctgttttctctcaatttttttatctaaaacccagcgttcgatgcttctttgagcgaacgatcaaaaataagtgccttcccatcaaaaaaatattctcaacataaaaaactttgtgtaatacttgAAAAACTTTGTGTAATACTTGTAACGCTACATGGAGATTA‑ACTCAATCTAGAGG‑GTATTAATAATGAAAGCTACTAAACTGGTACTGGGCGCGGTAATCCTGGGTTCTACTCTGCTGGCAGGTTGCTCCAGCa                                                                                                                                                                      >  1:561372‑M1/167‑299 (MQ=255)                                                                                                                                        aatctcactttatctaagatgaatccgatggaagcatcctgttttctctcaatttttttatctaaaacccagcgttcgatgcttctttgagcgaacgatcaaaaataagtgccttcccatcaaaaaaatattctcaacataaaaaactttgtgtaatacttgAAAAACTTTGTGTAATACTTGTAACGCTACATGGAGATTA‑ACTCAATCTAGAGG‑GTATTAATAATGAAAGCTACTAAACTGGTACTGGGCGCGGTAATCCTGGGTTCTACTCTGCTGGCAGGTTGCTCCAGCAACGc                                                                                                                                                                  <  1:249203‑M1/137‑1 (MQ=255)                                                                                                                                              actttatctaagatgaatccgatggaagcatcctgttttctctcaatttttttatctaaaacccagcgttcgatgcttctttgagcgaacgatcaaaaataagtgccttcccatcaaaaaaatattctcaacataaaaaactttgtgtaatacttgAAAAACTTTGTGTAATACTTGTAACGCTACATGGAGATTA‑ACTCAATCTAGAGG‑GTATTAATAATGAAAGCTACTAAACTGGTACTGGGCGCGGTAATCCTGGGTTCTACTCTGCTGGCAGGTTGCTCCAGCAACGCTAAAAt                                                                                                                                                            >  1:696255‑M1/157‑299 (MQ=255)                                                                                                                                                   atctaagatgaatccgatggaagcatcctgttttctctcaatttttttatctaaaacccagcgttcgatgcttctttgagcgaacgatcacaaataagtgccttcccatccaaaaaatattctcaacatatacaactttgtgtaatacttgAAAAACTTTGTGTAATACTTTTAACGCTCCATGGAGATTA‑ACCCACTCCTGATG‑GTATTAATAATAAAAGCTACAAAACAGGACCTGGGCGCGGTCATCCTGGGTTCACCTCTTCTGGCAGGTTTCTCCCGCAACGCTAAAATcgaaa                                                                                                                                                       <  2:305504‑M1/148‑3 (MQ=255)                                                                                                                                                    tttaagatgaattcgatgtaagcattcttttttctctcaatttttttatctaaaacccagcgttcggtgcatctttgagcgaacgatcaaaaataagtgccttccaatcaaaaaaatattctcaacataaaatactttgtgtaatacttgAAAAACTTTGTTTAATACTTGTAACGCTACATGGAGATTA‑ACTCAATCTAGAGG‑GTATTAATAATGAAAGCTACTAAACTGGTACTGGGCGCGGTAATCCTGGGTTCTACTCTGCTGGCAGGTTGCTCCAGCAACGCTAAAATCGATCa                                                                                                                                                      >  2:209023‑M1/151‑299 (MQ=255)                                                                                                                                                      taagatgaatgtgatggaagcattctgttttctctcaatttttttatctaaaacccagctttcgatgcttctttgagcgaacgatcaaaaataagtgccttcacatcaaaaaaagattctcaacataaaaaactttgtgtaatacttgAAAAACTTTGTGTAATACTTGTAACGCTACATGGAGATTA‑ACTCAATCTAGAGG‑GTATCAATAATGAAAGCTACTAAACTGGTACTGGGCGCGGTAATCCTGGGTTCTACTCTGCTGGCAGGTTGCTCCAGCAACGCTAAAATCGATCAGc                                                                                                                                                    >  2:363298‑M1/149‑299 (MQ=255)                                                                                                                                                       aagatgaatccgatggaagcatcctgttttctctcaatttttttatctaaaacccagcgttcgatgcttctttgagcgaacgatcaaaaataagtgccttcccatcaaaaaactattctcaacataaaaaactttgtgtaaaacttgAAAAACTTTTTGTAATACTTGTAACGCTACATTGTAATTA‑ACTAAA‑CAACACGAGCATTAATAATGAAAGTAACTAAACTGGTACTGGGCGCGGTAATCATGGGTTCTACTCTGCTTGCAGGTTGCCCCAGCAACGCTAaaatcgaacaccc                                                                                                                                                   <  2:508575‑M1/152‑7 (MQ=255)                                                                                                                                                       aagatgaatccgatggaagcatcctgttttctctcaatttttttatctaaaacccagcgttcgatgcttctttgagcgaacgatcaaaaataagtgccttcccatcaaaaaaatattctcaacataaaaaactttgtgtaatacttgAAAAACTTTGTGTAATACTTGTAACGCTACATGGAGATTA‑ACTCAATCTAGAGG‑GTATTAATAATGAAAGCTACTAAACTGGTACTGGGCGCGGTAATCCTGGGTTCTACTCTGCTGGCAGGTTGCTCCAGCAACGCTAAAATCGATCAGCt                                                                                                                                                   >  2:249203‑M1/148‑299 (MQ=255)                                                                                                                                                       aagatgaatccgatggaagcatcctgttttctctcaatttttttatctaaaacccagcgttcgatgcttctttgagcgaacgatcaaaaataagtgccttcccatcaaaaaaatattctcaacataaaaaactttgtgtaatacttgAAAAACTTTGTGTAATACTTGTAACGCTACATGGAGATTA‑ACTCAATCTAGAGG‑GTATTAATAATGAAAGCTACTAAACTGGTACTGGGCGCGGTAATCCTGGGTTCTACTCTGCTGGCAGGTTGCTCCAGCAACGCTAAAATCGATCAGCt                                                                                                                                                   >  1:232120‑M1/148‑299 (MQ=255)                                                                                                                                                       aagaagaatccgatcgaaacatccgtgtttttctcaatatttttaactaaaacccagcgttcgatgcttcattgatcgaacgatcaaaaataagtgacttccaattaaaagaatattctcaacataaaaaactttgtgtaatacttgAAAAACTTTGTGTAATACTTGTAACGCGACATGGAGATTA‑ACTCAATCTAGAGG‑GTATTAATAATGAAAGCTACTAAACTGGTACTGGGCGCGGTAATCCTGGGTTCTACTCTGCTGGCAGGTTGCTCCAGCAACGCTAAAATCGATCAGCt                                                                                                                                                   >  2:669205‑M1/148‑299 (MQ=255)                                                                                                                                                           ttattccgaaggaagcttactgttattctgcaatttttttatctaaaaccatgcgttcgatgcttctttggaagaacgatcaaaaataagtgccttaccagcaaaaaaatattctcaacataaaaaactttgtgtaatacttgAAAAACTTTGTGTAATACTTGTAACGCTACATGGAGATTA‑ACTCAATCTAGAGG‑GTATTAATAATGAAAGCTACTAAACTGGTACTGGGCGCGGTAATCCTGGGTTCTACTCTGCTGGCAGGTTGCTCCAGCAACGCTAAAATCGATCAGCTGtct                                                                                                                                               >  2:558541‑M1/144‑299 (MQ=255)                                                                                                                                                             aatccgatggaagcatcctgttttctctcaatttttttatctaaaacccagcgttcgatgcttctttgagcgaacgatcaaaaataagtgccttcccatcaaaaaaatattctcaacataaaaaactttgtgtaatacttgAAAAACTTTGTGTAATACTTGTAACGCTACATGGAGATTA‑ACTCAATCTAGAGG‑GTATTAATAATGAAAGCTACTAAACTGGTACTGGGCGCGGTAATCCTGGGTTCTACTCTGCTGGCAGGTTGCTCCAGCAACGCTAAAATCGATCAGCTGtcttc                                                                                                                                             <  1:657022‑M1/158‑1 (MQ=255)                                                                                                                                                              atccgatggaagcatcctgttttctctcaatttttttatctaaaacccagcgttcgatgcttctttgagcgaacgatcaaaaataagtgccttcccatcaaaaaaatattctcaacataaaaaactttgtgtaatacttgAAAAACTTTGTGTAATACTTGTAACGCTACATGGAGATTA‑ACTCAATCTAGAGG‑GTATTAATAATGAAAGCTACTAAACTGGTACTGGGCGCGGTAATCCTGGGTTCTACTCTGCTGGCAGGTTGCTCCAGCAACGCTAAAATCGATCAGCTGtcttct                                                                                                                                            >  1:525054‑M1/141‑299 (MQ=255)                                                                                                                                                                    atggaagcatcctgttttctctcaatttttttatctaaaacccagcgttcgatgcttctttgagcgaacgatcaaaaataagtgccttcccatcaaaaaatattctcaacataaaaaactttgtgtaatacttgAAAAACTTTGTGTAATACTTGTAACGCTACATGGAGATTA‑ACTCAATCTAGAGG‑GTATTAATAATGAAAGCTACTAAACTGGTACTGGGCGCGGTAATCCTGGGTTCTACTCTGCTGGCAGGTTGCTCCAGCAACGCTAAAATCGATCAGCTGTCTTCTGACGtt                                                                                                                                      >  1:34220‑M1/135‑299 (MQ=255)                                                                                                                                                                     ggaagcatcctgttttctctcaatttttttatctaaaacccagcgttcgatgcttctttgagcgaacgatcaaaaataagtgccttcccatcaaaaaaatattctcaacataaaaaactttgtgtaatacttgAAAAACTTTGTGTAATACTTGTAACGCTACATGGAGATTA‑ACTCAATCTAGAGG‑GTATTAATAATGAAAGCTACTAAACTGGTACTGGGCGCGGTAATCCTGGGTTCTACTCTGCTGGCAGGTTGCTCCAGCAACGCTAAAATCGATCAGCTGTCTTCTGACGTTc                                                                                                                                     >  1:68056‑M1/134‑299 (MQ=255)                                                                                                                                                                                                      taaaacccagcgttcgatgcttctttgagcgaacgatcaaaaataagtgccttcccatcaaaaaaatattctcaacataaaaaactttgtgtactacttgAAAAACTTTGTGTAATACTTGTAACGCTACATGGAGATTA‑ACTCAATCTAGAGG‑GTATTAATAATGAAAGCTACTAAACTGGTAATGGGCGCGGTAATCCTGGGTTCTACTCTGCTGGCAGGTTGCTCCAGCAACGCTAAAATCCATCAGCTGTCTTCTGACGTTCAGACTCTCCACTCTAAAGTTCACCCGctgacaa                                                                                                    <  2:52420‑M1/199‑4 (MQ=255)                                                                                                                                                                                                            ccagcgttcgatgcttctttgagcgaacgatcaaaaataagtgccttcccatcaaaaaaatattctcaacataaaaaactttgtgtaatacttgAAAAACTTTGTGTAATACTTGTAACGCTACATGGAGATTA‑ACTCAATCTAGAGG‑GTATTAATAATGAAAGCTACTAAACTGGTACTGGGCGCGGTAATCCTGGGTTCTACTCTGCTGGCAGGTTGCTCCAGCAACGCTaaa                                                                                                                                                              >  2:668183‑M1/95‑235 (MQ=255)                                                                                                                                                                                                            ccagcgttcgatgcttctttgagcgaacgatcaaaaataagtgccttcccatcaaaaaaatattctcaacataaaaaactttgtgtaatacttgAAAAACTTTGTGTAATACTTGTAACGCTACATGGAGATTA‑ACTCAATCTAGAGG‑GTATTAATAATGAAAGCTACTAAACTGGTACTGGGCGCGGTAATCCTGGGTTCTACTCTGCTGGCAGGTTGCTCCAGCAACGCTaaa                                                                                                                                                              <  1:668183‑M1/141‑1 (MQ=255)                                                                                                                                                                                                                    cgatgcttctttgagcgaacgatcaaaaataagtgccttcccatcaaaaaaatattctcaacataaaaaactttgtgtaatacttgAAAAACTTTGTGCAATACTTGTAACGCTACATGGAGATTA‑ACTCAATCTAGAGG‑GTATTAATAATGAAAGCTACTAAACTGGTACTGGGCGCGGTAATCCTGGGTTCTACTCTGCTGGCAGGTTGCTCCAGCAACGCTAAAATCGATCAGCTGTCTTCTGACGTTCAGACTCTGAACGCTAAAGTTGACCAGCTGAGCAACGACGTGAACGCa                                                                                      <  2:15272‑M1/213‑1 (MQ=255)                                                                                                                                                                                                                       tgcttctttgagcgaacgatcaaaaataagtgccttcccatcaaaaaaatattctcaacataaaaaactttgtgtaatacttgAAAAACTTTGTGCAATACTTGTAACGCTACATGGAGATTA‑ACTCAATCTAGAGG‑GTATTAATAATGAAAGCTACTAAACTGGTACTGGGCGCGGTAATCCTGGGTTCTACTCTGCTGGCAGGTTGCTCCAGCAACGCTAAAATCGATCAGCTGTCTTCTGACGTTCAGACTCTGAACGCTAAAGTTGACCAGCTGAGCAACGACGTGAACGCAATg                                                                                   >  1:15272‑M1/84‑299 (MQ=255)                                                                                                                                                                                                                          ttctttgagcgaacgatcaaaaataagtgccttcccatcaaaaaaatattctcaacataaaaaactttgtgtaatacttgAAAAACTTTGTGTAATACTTGTAACGCTACATGGAGATTA‑ACTCAATCTAGAGG‑GTATTAATAATGAAAGCTACTAAACTGGTACTGGGCGCGGTAATCCTGGGTTCTACTCTGCTGGCAGGTTGCTCCAGCAACGCTAAAATCGATCAGCTGTCTTCTGACGTTCAGACTCTGAACGCTAAAGTTGACCAGCTGAGCAACGACGTGAACGCAATGCGt                                                                                >  1:679154‑M1/81‑299 (MQ=255)                                                                                                                                                                                                                                gagcgaacgatcaaaaataagtgccttcccatcaaaaaaatattctcaacataaaaaactttgtgtaatacttgAAAAACTTTGTGTAATACTTGTAACGCTACATGGAGATTA‑ACTCAATCAAGAGG‑GTATTAATAATGAAAGCTACTAAACTGGTACTGGGCGCGGTAATCCTGGGTTCTACTCTGCTGGCAGGTTGCTCCAGCAACGCTAAAATCGATCAGCTGTCTTCTGACGTTCAGACTCTGAACGCTAAAGTTGACCAGCTGAGCAACGACGTGAACGCAATGCGTTCCGAc                                                                          >  1:508575‑M1/75‑299 (MQ=255)                                                                                                                                                                                                                                  gcgaacgatcaaaaataagtgccttcccatcaaaaaaatattctcaacataaaaaactttgtgtaatacttgAAAAACTTTGTGTAATACTTGTAACGCTACATGGAGATTA‑ACTCAATCTAGAGG‑GTATTAATAATGAAAGCTACTAAACTGGTACTGGGCGCGGTAATCCTGGGTTCTACTCTGCTGGCAGGTTGCTCCAGCAACGCTAAAATCGATCAGCTGTCTTCTGACGTTCAGACTCTGAACGCTAAAGTTGACCAGCTGAGCAACGACGTGAACGCAATGCGTTCCGACGt                                                                        >  1:471808‑M1/73‑299 (MQ=255)                                                                                                                                                                                                                                    caacgatcaaaaataagtgccttcccatcaacaaaatattctcaacataaaaaactttgtgtaatacttgAAAAACTTTGTGTAATACTTGTAACGCTACATGGAGATTA‑ACTCAATCTAGCGG‑GTATTAATAATGAAAGCTACTAAACTGGTACTGGTCGCGGTAATCCTGGTTTCTACTCTGCTGGCAGGTTGCTCCAGCAACGCTAAACTCGATCAGCTGTCTCCTGACATTCAGACCCTCAACGCGAAAGTTGACCAGCTGCGCAACGACGTCAacccaatacgtgcgcacgtta                                                                      <  2:98712‑M1/229‑11 (MQ=255)                                                                                                                                                                                                                                        gatcaaaaataagtgccttcccatcaaaaaaatattctcaacataaaaaactttgtgtaatacttgAAAAACTTTGTGTAATACTTGTAACGCTACATGGAGATTA‑ACTCAATCTAGAGG‑GTATTAATAATGAAAGCTACTAAACTGGTACTGGGCGCGGTAATCCTGGGTTCTACTCTGCTGGCAGGTTGCTCCAGCAACGCTAAAATCGATCAGCTGTCTTCTGACGTTCAGACTCTGAACGCTAAAGTTGACCAGCTGAGCAACGACGTGAACGCAATGCGTTCCGACGTTCAGgc                                                                  <  1:707209‑M1/233‑1 (MQ=255)                                                                                                                                                                                                                                                ataagtgccttcccatcaaaaaaatattctcaacataaaaaactttgtgtaatacttgAAAAACTTTGTGTAATACTTGTAACGCTACATGGAGATTA‑ACTCAATCTAGAGG‑GTATTAATAATGAAAGCTACTAAACTGGTACTGGGCGCGGTAATCCTGGGTTCTACTCTGCTGGCAGGTTGCTCCAGCAACGCTAAAATCGATCAGCTGTCTTCTGACGTTCAGACTCTGAACGCTAAAGTTGACCAGCTGAGCAACGACGTGAACGCAATGCGTTCCGACGTTCAGGCTGCTAAAg                                                          <  2:218740‑M1/241‑1 (MQ=255)                                                                                                                                                                                                                                                                 aacaaaatattctcaacataaaaaactttgtgtaatacttgAAAAACTTTGTGTAATACTTGTAACGCTACATGTAGATTA‑ACTCAATCTAGAGG‑GTATTACTAATGAAAGCTACTAAACTGGTACTGGGCGCGGAAATACTGAGTTCTACTCTGCTGGCAGGTTGCTTCAGCCACGCTCAACTCGATCAGCTGTCTTCTGACGTTCAGCCTCTGAACGCTAAATTTGACCTGCTGATCAACGCCGTGAACGACACGCGTTACGACGTTAGGACCGCTAAAAATGACGCAGCtcgtcct                                         <  2:556453‑M1/258‑4 (MQ=255)                                                                                                                                                                                                                                                                     aaatattctcaacataaaaaactttgtgtaatacttgAAAAACTTTGTGTAATACTTGTAACGCTACATGGAGATTA‑ACTCAATCTAGAGG‑GTATTAATAATGAAAGCTACTAAACTGGTACTGGGCGCGGTAATCCTGGGTTCTACTCTGCTGGCAGGTTGCTCCAGCAACGCTAAAATCGATCAGCTGTCTTCTGACGTTCAGACTCTGAACGCTAAAGTTGACCAGCTGAGCAACGACGTGAACGCAATGCGTTCCGACGTTCAGGCTGCTAAAGATGACGCAGCTCGTGCTAAcc                                     >  1:464641‑M1/38‑299 (MQ=255)                                                                                                                                                                                                                                                                       atattctcaacataaaaaactttgtgtaatacttgAAAAACTTTGTGTAATACTTGTAACGCTACATGGAGATTA‑ACTCAATCTAGAGG‑GTATTAATAATGAAAGCTACTAAACTGGTACTGGGCGCGGTAATCCTGGGTTCTACTCTGCTGGCAGGTTGCTCCAGCAACGCTAAAATCGATCAGCTGTCTTCTGACGTTCAGACTCTGAACGCTAAAGTTGACCAGCTGAGCAACGACGTGAACGCAATGCGTTCCGACGTTCAGGCTGCTAAAGATGACGCAGCTCGTGCTAACCAg                                   <  1:493382‑M1/264‑1 (MQ=255)                                                                                                                                                                                                                                                                           tctcaacataaaaaactttgtgtaatacttgAAAAACTTTGTGTAATACTTGTAACGCTACATGGAGATTA‑ACTCAATCTAGAGG‑GTATTAATAATGAAAGCTACTAAACTGGTACTGGGCGCGGTAATCCTGGGTTCTACTCTGCTGGCAGGTTGCTCCAGCAACGCTAAAATCGATCAGCTGTCTTCTGACGTTCAGACTCTGAACGCTAAAGTTGACCAGCTGAGCAACGACGTGAACGCAATGCGTTCCGACGTTCAGGCTGCTAAAGATGACGCAGCTCGTGCTAACCAGCGTc                               >  1:499993‑M1/32‑299 (MQ=255)                                                                                                                                                                                                                                                                                  ataaaaaactttgtgtaatacttgAAAAACTTTGTGTAATACTTGTAACGCTACATGGAGATTA‑ACTCAATCTAGAGG‑GTATTAATAATGAAAGCTACTAAACTGGTACTGGGCGCGGTAATCCTGGGTTCTACTCTGCTGGCAGGTTGCTCCAGCAACGCTAAAATCGATCAGCTGTCTTCTGACGTTCAGACTCTGAACGCTAAAGTTGACCAGCTGAGCAACGACGTGAACGCAATGCGTTCCGACGTTCAGGCTGCTAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGacaa                        <  1:327073‑M1/275‑1 (MQ=255)                                                                                                                                                                                                                                                                                     aaaaactttgtgtaatacttgAAAAACTTTGTGTAATACTTGTAACGCTACATGGAGATTA‑ACTCAATCTAGAGG‑GTATTAATAATGAAAGCTACTAAACTGGTACTGGGCGCGGTAATCCTGGGTTCTACTCTGCTGGCAGGTTGCTCCAGCAACGCTAAAATCGATCAGCTGTCTTCTGACGTTCAGACTCTGAACGCTAAAGTTGACCAGCTGAGCAACGACGTGAACGCAATGCGTTCCGACGTTCAGGCTGCTAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACAt                     >  1:208815‑M1/22‑299 (MQ=255)                                                                                                                                                                                                                                                                                        aactttgtgtaatacttgAAAAACTTTGTGTAATACTTGTAACGCTACATGGAGATTA‑ACTCAATCTAGAGG‑GTATTAATAATGAAAGCTACTAAACTGGTACTGGGCGCGGTAATCCTGGGTTCTACTCTGCTGGCAGGTTGCTCCAGCAACGCTAAAATCGATCAGCTGTCTTCTGACGTTCAGACTCTGAACGCTAAAGTTGACCAGCTGAGCAACGACGTGAACGCAATGCGTTCCGACGTTCAGGCTGCTAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGc                  <  1:473861‑M1/281‑1 (MQ=255)                                                                                                                                                                                                                                                                                             tgtgtaatacttgAAAAACTTTGTGTAATACTTGTAACGCTACATGGAGATTA‑ACTCAATCTAGAGG‑GTATTAATAATGAAAGCTACTAAACTGGTACTGGGCGCGGTAATCCTGGGTTCTACTCTGCTGGCAGGTTGCTCCAGCAACGCTAAAATCGATCAGCTGTCTTCTGACGTTCAGACTCTGAACGCTAAAGTTGACCAGCTGAGCAACGACGTGAACGCAATGCGTTCCGACGTTCAGGCTGCTAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGctacta             <  1:329024‑M1/286‑1 (MQ=255)                                                                                                                                                                                                                                                                                                  aatacttgAAAAACCTTTTGTATTATTGGTAACATTACATGAGTATTAGACT‑AAGCTATGGG‑GTTTTAAAAATAGAAACTTCTTAACTTGTACTGGGCGCGGTAATCCTGGGTTCTACTCTGCTGGCAGGTTGCTCCAGCAACGCTAAAATCGATCAGCTGTCTTCTGACGTTCAGACTCTGAACGCTAAAGTTGACCAGCTGAGCAACGACGTGAACGCAATGCGTTCCGACGTTCAGGCTGCTAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATAc        >  2:669564‑M1/9‑299 (MQ=255)                                                                                                                                                                                                                                                                                                      cttgAAAAACTTTGTGTAATACTTGTAACGCTACATGGAGATTA‑ACTCAATCTAGAGG‑GTATTAATAATGAAAGCTACTAAACTGGTACTGGGCGCGGTAATCCTGGGTTCTACTCTGCTGGCAGGTTGCTCCAGCAACGCTAAAATCGATCAGCTGTCTTCTGACGTTCAGACTCTGAACGCTAAAGTTGACCAGCTGAGCAACGACGTGAACGCAATGCGTTCCGACGTTCAGGCTGCTAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCa    <  1:52793‑M1/295‑1 (MQ=255)                                                                                                                                                                                                                                                                                                       ttgAAAAACTTTGTGTAATACTTGTAACGCTACATGGAGATTA‑ACTCAATCTAGAGG‑GTATTAATAATGAAAGCTACTAAACTGGTACTGGGCGCGGTAATCCTGGGTTCTACTCTGCTGGCAGGTTGCTCCAGCAACGCTAAAATCGATCAGCTGTCTTCTGACGTTCAGACTCTGAACGCTAAAGTTGACCAGCTGAGCAACGACGTGAACGCAATGCGTTCCGACGTTCAGGCTGCTAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCaa   <  1:337441‑M1/296‑1 (MQ=255)                                                                                                                                                                                                                                                                                                        tgAAAAACTTTGTGTAATACTTGTAACGCTACATGGAGATTA‑ACTCAATCTAGAGG‑GTATTAATAATGAAAGCTACTAAACTGGTACTGGGCGCGGTAATCCTGGGTTCTACTCTGCTGGCAGGTTGCTCCAGCAACGCTAAAATCGATCAGCTGTCTTCTGACGTTCAGACTCTGAACGCTAAAGTTGACCAGCTGAGCAACGACGTGAACGCAATGCGTTCCGACGTTCAGGCTGCTAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAg  <  1:503632‑M1/297‑1 (MQ=255)                                                                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                                                                           CACTGGTACCGAGCGGCACTACTAACACCGCATCTGTTCACGTCCTGTAATATTGCTTTTGTGAATTAATTTGTATATCGAAGCGCCCTGATGGGCGCTTTTTTTATTTAATCGATAACCAGAAGCAATAAAAAATCAAATCGGATTTCACTATATAATCTCACTTTATCTAAGATGAATCCGATGGAAGCATCCTGTTTTCTCTCAATTTTTTTATCTAAAACCCAGCGTTCGATGCTTCTTTGAGCGAACGATCAAAAATAAGTGCCTTCCCATCAAAAAAATATTCTCAACATAAAAAACTTTGTGTAATACTTGTAACGCTACATGGAGATTA‑ACTCAATCTAGAGG‑GTATTAATAATGAAAGCTACTAAACTGGTACTGGGCGCGGTAATCCTGGGTTCTACTCTGCTGGCAGGTTGCTCCAGCAACGCTAAAATCGATCAGCTGTCTTCTGACGTTCAGACTCTGAACGCTAAAGTTGACCAGCTGAGCAACGACGTGAACGCAATGCGTTCCGACGTTCAGGCTGCTAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAG  >  CP006584/1840468‑1841061

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.