New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP006584	= 2891935	NA (NA)	68 (1.080)	57/586	0.2	97.2%	intergenic (+12/+249)	LY180_13750/LY180_13755	hypothetical protein/transcriptional regulator
	?	CP006584	= 3268631	2 (0.030)					coding (88/1119 nt)	LY180_15515	hydrogenase 2 small subunit

GAACGAGCAGCTCAGAGCGTTTTGATATCATGCTGCTAATCGCCCTGATGCTTCAACTAACATGTTGGCTTGCGGGCGTTCATGCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACA‑TGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTGTAATGCAGGAAAAAAGATGTCATCGACACTAGTGACGATGACATGTGATGACAATGTTTATCGCGAAAGAGCAATGAGTGAGTCGCGGCGGATCAGTTTTCCGCTG  >  CP006584/2891646‑2892232                                                                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                                                                          gAACGAGCAGCTCAGAGCGTTTTGATATCATGCTGCTAATCGCCCTGATGCTTCAACTAACATGTTGGCTTGCGGGCGTTCATGCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACA‑TGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGt                                                                                                                                                                                                                                                                                                  >  1:200515/1‑299 (MQ=31)  aaCGAGCAGCTCAGAGCGTTTTGATATCATGCTGCTAATATCCCTGATGCTTCAACTAACATGTTGGCTTGCGGGCGTTCATGCTCAGAAACAAGGTTGGGACAAGCACTTGCAGACTCACACAGTCAGAAATCGAAACGTACTCTCAATAGTTCGCTTCGGCCTGTAAGTTTTGCAGTATTACGGCCACACACTAACAAGGGAAGCCTTACTCGAGGCTCCCACCCTCCCCGCTCAAAATTTCGTCACAAA‑TGGTGACGATTAGGAGAACGCATGAGGAGAGCTCTCAGTCCACAGTc                                                                                                                                                                                                                                                                                                 >  2:220568/1‑299 (MQ=11)          gcTCAGAGCGTTTTGATATCATGCTGCTAATCGCCCTGATGCTTCAACTAACATGTTGGCTTGCGGGCGTTCATGCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACA‑TGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGAtttt                                                                                                                                                                                                                                                                                         <  1:475968/299‑1 (MQ=34)                      ttGATATCATGCTGCTAATCGCCCTGATGCTTCAACTAACATGTTGGCTTGCGGGCGTTCATGCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCCAACA‑TGGTTAAGCTTTGGGGAAATTATGAGGGGATCTCTCACTGCACAATACTGATTTTCCtgatgaataa                                                                                                                                                                                                                                                                             >  2:597078/1‑295 (MQ=255)                          tatCATGCTGCTAATCGCCCTGATGCTTCAACTAACATGTTGGCTTGCGGGCGTTCATGCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACA‑TGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACcac                                                                                                                                                                                                                                                                         >  1:250137/1‑299 (MQ=40)                              ttgctgcTCATCGCCCTAGTGCTTCAACTAACATGTTGGCTTTCGGGCGGTCATGCTCAGAAACAAGGTGTGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTAATCTCAACAGTTAGCTTAGGCATGGAAGTTTTGCGTCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACA‑TGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACcacgcac                                                                                                                                                                                                                                                                     <  2:390109/298‑1 (MQ=14)                                gctgctAATCGCCCTGATGCTTCAACTAACATGTTGGCTTGCGGGCGTTCATGCTCAGATACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACA‑TGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCacgcacgc                                                                                                                                                                                                                                                                   >  1:181130/1‑299 (MQ=255)                                  tgcgAATCGCCCTGATGCTTCAACTAACATGTTGGCTTGCGGGCGGGCATGCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGGCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACA‑TGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCa                                                                                                                                                                                                                                                                 <  2:200515/299‑1 (MQ=255)                                     tAATCGCCCTGATGCTTCAACTAACATGTTGGCTTGCGGGCGTTCATGCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACA‑TGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACtt                                                                                                                                                                                                                                                              >  1:448442/1‑299 (MQ=255)                                       aTCGCCCTGATGCTTCAACTAACATGTTGGCTTGCGGGCGTTCATGCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACA‑TGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTca                                                                                                                                                                                                                                                            >  1:360111/1‑299 (MQ=255)                                         ccccccGATGTTTAAACTAAAAGATTGGCTTGCGGGCGTTCATGCTCTGAAACAAGGTTGTGACAAGCACTGCCAGGCTAAAACATGCAGAAAATTAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACA‑TGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTcaca                                                                                                                                                                                                                                                          <  2:161965/297‑1 (MQ=14)                                          gCCCTGATGCTTCAACTAACATGTTGGCTTGCGGGCGTTCATGCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACA‑TGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAg                                                                                                                                                                                                                                                         >  1:118067/1‑299 (MQ=255)                                                       aaCTAACATGTTGGCTTGCGGGCGTTCATGCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACA‑TGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCaa                                                                                                                                                                                                                                            >  1:240614/1‑299 (MQ=255)                                                        aCTAACATGTTGGCTTGCGGGCGTTCATGCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACA‑TGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAAt                                                                                                                                                                                                                                           <  1:718926/299‑1 (MQ=255)                                                             cATGTTGGCTTGCGGGCGTTCATGCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACA‑TGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACAtt                                                                                                                                                                                                                                      >  1:522254/1‑299 (MQ=255)                                                             cATGTTGGCTTGCGGGCGTTCATGCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACA‑TGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACAtt                                                                                                                                                                                                                                      <  1:143319/299‑1 (MQ=255)                                                                   ggCTTGCGGGCGTTCATGCTCAGAAAAAAGGTTGGGACAAGCCCTTCCAGGCTAACCCAGTCAGAAATCGAAACGTACTCTCAACAATTCGCTTAGGCATGGAAGTTTTGCGGCATGCTGGCTACACAATAACAAGGGAAGAGTTACTTGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACC‑TGGATACGACTTGGGCAAATTATGAGGGAATCTATACGTGCACAGCCCTGATTTGCCTGATGAGAAACCACCCACGACACATCACCGGTACGACAACACATACATTTaaaca                                                                                                                                                                                                                                >  2:272372/1‑295 (MQ=14)                                                                          cggggtgcatgggaaGAAAAAAGGGGGGAACAAGCACGTCCGAGCTAACAAAGTCAGAAATCGAAACGTACTCACAACAGTTCCCTGAGGCATGGAAGTTTCTGGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACA‑TGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGc                                                                                                                                                                                                                         <  2:670066/285‑1 (MQ=18)                                                                           gtcGTTCATGCTAAGAAACAAGTGTGGGCAAATGACTGCCAGGTTAAGACAGTCAGCAACCGGAATAGAAACTCAACAGTTCGCGGAGGCAGGGAAATTTTGCGGCTGTCTGGCTACACAACAACAAGGGGAGACGGAATCGTGGCTGCGACGCTACTAGCTCAAAATTTATTCACTCA‑GGGTGACGCTTTGGGGAAATTATGAGGGGATCTCTAAGTGCACAGTCCTGATGTTCCTGATGAGTAACCACGCACGCCACATCACAGGTACGGCAACCAATACATTTACTCGCGTCAGcg                                                                                                                                                                                                                        <  2:458888/297‑2 (MQ=255)                                                                            gctttCATGCTCAGACACCAGGTTGGGACAAGCACATCCAGGCTAACACAGTGAGAAAACGAAACGTACTCTCAACAGTTCGCTTATGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGTGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACA‑TGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTTCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCaa                                                                                                                                                                                                                       <  2:10226/296‑1 (MQ=255)                                                                              gTTCATGCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACA‑TGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAatg                                                                                                                                                                                                                     >  1:706571/1‑299 (MQ=255)                                                                              gTTCATGCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACA‑TGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAatg                                                                                                                                                                                                                     >  1:432206/1‑299 (MQ=255)                                                                                tCATGCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACA‑TGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAatgat                                                                                                                                                                                                                   <  1:448321/299‑1 (MQ=255)                                                                                 cATGCTCAGAAACAAGGTTGGGAAAACCACTTCCAGGCTAACACAGTAAGAAATCGAAACGTACGCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGAATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACA‑TGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAatgatg                                                                                                                                                                                                                  <  2:452515/299‑1 (MQ=255)                                                                                  aTGCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACA‑TGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAAtgatga                                                                                                                                                                                                                 <  1:159343/299‑1 (MQ=255)                                                                                        aGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACA‑TGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGt                                                                                                                                                                                                           <  1:104958/299‑1 (MQ=255)                                                                                                  ttGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACA‑TGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAAtt                                                                                                                                                                                                 <  1:97716/299‑1 (MQ=255)                                                                                                            cACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACA‑TGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAAt                                                                                                                                                                                       >  1:456118/1‑299 (MQ=255)                                                                                                                  cAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACA‑TGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACCGTCCTGATTTTCCTGATGAGAAACCACGCCCGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCATCAATGATGAACAGGTTCATAAAACTCTCCCACAATGACAGt                                                                                                                                                                                 >  2:384733/1‑299 (MQ=255)                                                                                                                      cTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACA‑TGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAAt                                                                                                                                                                             >  1:344760/1‑299 (MQ=255)                                                                                                                         acacAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACA‑TGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATgcg                                                                                                                                                                          >  1:345786/1‑299 (MQ=255)                                                                                                                                  gAAATCGAAACGGACTTGCACGAGTTGGCTTGGGCATGGAATTTTGGGTGCAATCTGGGTAACCAATAAAAAGGGAAGACTTTCTCGTGGTGTCAACCCTACTGGCTCAACATTTATTCAGCCA‑TGGTTACGCTTTGGGGAAATTATGAGGGGATCTATCAGTGCACAGTGCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAAGTCTCCAGCAATGACAGTTAATGCGCCGATACAt                                                                                                                                                                 <  2:375428/299‑1 (MQ=25)                                                                                                                                    aatggaaccagaCTCTCAACAGAAGCTTTAGTCATGGAAGTTTTGCATCCTTCTGGCTACACAAGAACAAAGTAAGCCTTTGTCATTGCGACCACCATACGAGTGGCAAATTTATTGCAACA‑TGGTTACGCTTTGGTGAAATTATGAGGTGATCTCTCCGTGCACAGGCCTGATTTTCCTGATGAGAAAGCACGCACGCACCTTCACAGGTACGTCAACCAATACATTGACTGGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTc                                                                                                                                                               <  2:385807/288‑1 (MQ=255)                                                                                                                                           aCGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACA‑TGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATc                                                                                                                                                        <  1:597078/299‑1 (MQ=255)                                                                                                                                              tACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACA‑TGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATg                                                                                                                                                     >  1:218422/1‑299 (MQ=255)                                                                                                                                                    cAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACA‑TGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGtt                                                                                                                                               <  1:357049/299‑1 (MQ=255)                                                                                                                                                         gTTCGCGTGGGGATGGAAGTTTTGGGCTATCCTGGCTAAAACAGAAAAAGGGGAGGCTTACTAGGTGCTGCAACCCTACTAGATCAGAATTTATTTCAACA‑TGGGTACGGTTTGGGGAAATTATGAGGGGATCTCTGAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTaa                                                                                                                                          <  2:697468/299‑1 (MQ=255)                                                                                                                                                                  ggCAGGGAAGTTTTGCGGCATTCTGGCTAAACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACA‑TGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGtt                                                                                                                                 <  1:438479/299‑1 (MQ=255)                                                                                                                                                                    cATGGAAGTTTTGCGGCATTCTGGCTACACAATATCAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACA‑TGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTAt                                                                                                                               <  1:694005/299‑1 (MQ=255)                                                                                                                                                                      tGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACA‑TGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTAttt                                                                                                                             >  1:464345/1‑299 (MQ=255)                                                                                                                                                                         aaGTTTTGCGGCATTTTGTGTACACAATCACAAGGGAAGACTTACCCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACA‑TGGTTACGCTTTGGGGAAAGTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAg                                                                                                                          <  2:345786/299‑1 (MQ=255)                                                                                                                                                                           gTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACA‑TGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGa                                                                                                                        <  1:384733/299‑1 (MQ=255)                                                                                                                                                                            ttttGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACA‑TGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGaa                                                                                                                       <  1:301628/299‑1 (MQ=255)                                                                                                                                                                             tttGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACA‑TGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGaaa                                                                                                                      <  1:590824/299‑1 (MQ=255)                                                                                                                                                                                      ttCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACA‑TGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGAACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGACACGATTCATAAATTTCCACAGCAATGACAGTTAATGGCACGATAAATTCACAAATAATGCAAGATTTTAATTCACTGTTATTTAAGGAAATAAATTGCt                                                                                                             >  2:684142/1‑299 (MQ=25)                                                                                                                                                                                         tGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACA‑TGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTGTa                                                                                                          <  1:180536/299‑1 (MQ=255)                                                                                                                                                                                            cTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACA‑TGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATCCACTGTTATTTAAGGAAATTAATTTCTGTAATg                                                                                                       <  1:166355/299‑1 (MQ=255)                                                                                                                                                                                              acacAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACA‑TGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTGTAATGCa                                                                                                     >  1:560685/1‑299 (MQ=255)                                                                                                                                                                                              aaccgatgaCAAGGGCAGACTTACCCGGGGCTGCAACCCAACTAACTCGACATTTATTCACACA‑TGGTGACGCTTTGGGGAAATTATGATGGGATCTATCAGTGCACAGTCCTGATGTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGTCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGGTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTGTAATGCa                                                                                                     <  2:240614/291‑1 (MQ=255)                                                                                                                                                                                               cacaATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACA‑TGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTGTGATGCAg                                                                                                    >  1:142966/1‑299 (MQ=255)                                                                                                                                                                                                acaATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACA‑TGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTGTAATGCAgg                                                                                                   >  1:603689/1‑299 (MQ=255)                                                                                                                                                                                                   aTAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACA‑TGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTGTAATGCAGGaaa                                                                                                <  1:67781/299‑1 (MQ=255)                                                                                                                                                                                                     aaCAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACA‑TGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTGTAATGCAGGaaaaa                                                                                              >  1:168430/1‑299 (MQ=255)                                                                                                                                                                                                                              tacaccgcactaCCTCAAAATTTATTCA‑ACAGTGGTTACGTTTTGGTGAAAGTATGAGGGGATATCTCATGGCAAAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGTAAATTAATTTCTGTAATGCAGGAAAAAAGATGTCATCGACACTAGTGACGAt                                                                     <  2:432206/291‑1 (MQ=255)                                                                                                                                                                                                                                   ccTACTAGCTCAAAATTTATTCACACA‑TGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTGTAATGCAGGAAAAAAGATGTCATCGACACTAGTGACGATGACAt                                                                <  1:284496/299‑1 (MQ=255)                                                                                                                                                                                                                                            tCAAAATTTATTCACACA‑TGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTGTAATGCAGGAAAAAAGATGTCATCGACACTAGTGACGATGACATGTGATGACa                                                       >  1:35233/1‑299 (MQ=255)                                                                                                                                                                                                                                                               tGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTGTAATGCAGGAAAAAAGATGTCATCGACACTAGTGACGATGACATGTGATGACAATGTTTATCGCGAAagag                                     <  1:218265/299‑1 (MQ=255)                                                                                                                                                                                                                                                                    actggttGGGGAAATTATTAGGGGCTCCCACAGTTGAAAGTCCTGATTTTCCTGATGACAAACAAAGCAGGCCACTTCACAGGTACGGAAAAAAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTAAATGTTATTTAAGGAAATTAATTTCTGTAAGGAAGGAAAAAAGATGTCATCGACACTAGTGAAGAGGGAATGTGATGACAATGTTTATCGCGAAagagagagg                                <  1:516014/294‑6 (MQ=255)                                                                                                                                                                                                                                                                        tttGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATCTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTGTAATGCAGGAAAAAAGATGTCATCGACACTAGTGACGATGACATGTGATGACAATGTTTATCGCGAAAGAGCAAtgagtg                            <  1:640509/299‑1 (MQ=255)                                                                                                                                                                                                                                                                          tGGGTAATTTATGAGTGGATCTCTCAGTGCACAGTCCTGATTTTCCCGATAAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACTGTTCAGCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTGTAATGCAGGAAAAAAGATGTCATCGACACTAGTGACGATGACATGTGATGACAATGTTTATCGCGAAAGAGCAAtgagtgag                          <  2:168430/299‑1 (MQ=255)                                                                                                                                                                                                                                                                                   tATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTGTAATGCAGGAAAAAAGATGTCATCGACACTAGTGACGATGACATGTGATGACAATGTTTATCGCGAAAGAGCAATGAGTGAGTCGcggcgg                 >  1:324928/1‑299 (MQ=255)                                                                                                                                                                                                                                                                                      gAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTGTAATGCAGGAAAAAAGATGTCATCGACACTAGTGACGATGACATGTGATGACAATGTTTATCGCGAAAGAGCAATGAGTGAGTCGCGGCGGATc              >  1:309887/1‑299 (MQ=255)                                                                                                                                                                                                                                                                                               tctcAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTGTAATGCAGGAAAAAAGATGTCATCGACACTAGTGACGATGACATGTGATGACAATGTTTATCGCGAAAGAGCAATGAGTGAGTCGCGGCGGATCAGTTTTCCg     >  1:634588/1‑299 (MQ=255)                                                                                                                                                                                                                                                                                                  cAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTGTAATGCAGGAAAAAAGATGTCATCGACACTAGTGACGATGACATGTGATGACAATGTTTATCGCGAAAGAGCAATGAGTGAGTCGCGGCGGATCAGTTTTCCGCTg  >  1:727104/1‑299 (MQ=255)                                                                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                                                                          GAACGAGCAGCTCAGAGCGTTTTGATATCATGCTGCTAATCGCCCTGATGCTTCAACTAACATGTTGGCTTGCGGGCGTTCATGCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACA‑TGGTTACGCTTTGGGGAAATTATGAGGGGATCTCTCAGTGCACAGTCCTGATTTTCCTGATGAGAAACCACGCACGCCACTTCACAGGTACGGCAACCAATACATTTACTCGCGTCAGCAATGATGAAACGGTTCATCAAATTCTCCAGCAATGACAGTTAATGCGCCGATACATTCACAAATCATGCCAGTTTTTAATTCACTGTTATTTAAGGAAATTAATTTCTGTAATGCAGGAAAAAAGATGTCATCGACACTAGTGACGATGACATGTGATGACAATGTTTATCGCGAAAGAGCAATGAGTGAGTCGCGGCGGATCAGTTTTCCGCTG  >  CP006584/2891646‑2892232

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.