New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP006584	= 1435631	1 (0.040)	27 (0.960)	23/586	0.3	96.4%	coding (690/951 nt)	LY180_06790	universal stress protein E
	?	CP006584	= 1666594	NA (NA)					intergenic (‑107/+75)	LY180_07840/LY180_07845	hypothetical protein/porin

GATAACTCGGGCCTTGTCAGTTATTGAAGAGTCGTTAATCGTCTTCTTCGTCATCCAGTTCAACGGGTGTCTGATACTGGTCAGGTTTAATGACCAACAGATCGCAGCGAAGATGATCAATCACCTGTTCCGCCGTGTTGCCGAGGAATGCTGCTGAAATACCGGTGCGTCCTACCGTGCCCAGAACCACAATCCCCGCCTGTAAGTGCTCCGCCAAATCAGGAATCACCTCTTCTGGCAGACCTTTTTCTACGTGCGTCATGTTTTCATTAATGCCGAATTTCTGCCGCAGAGCTTTCATTGCCAGCAAATGTTGCCCACGAATGGCATCGTTATAAACGCTCGGATCAAATTCCGGCAGTTCAATCGCGATATTAATTGGCGTTACTGGGTAAGCGCCAACCAGATGAACTTCGGTATGGTTGACTTGTTCTGCCAGTTCGATCGTCTCTTTGACCAGTTTTTCATTGAGTGCATTATGATACGGCTCTTCACTGGCGAGATTCACCGCCACCAGCGCCTTACCTCCTTCCGGCCACGGCTGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGTAACAGATGCCAG  >  CP006584/1435336‑1435928                                                                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                                                                          gatctctcgggCCTTGTCAGTTATTGAAGAGTCGTTAATCGTCTTCTTCGTCATCCAGTTCAACGGGTGTCTGATACTGGTCAGGTTTAATGACCAACAGATCGCAGCGAAGATGATCAATCACCTGTTCCGCCGTGTTGCCGAGGAATGCTGCTGAAATACCGGTGCGTCCTACCTTGCCCAGAACCACAATCCCCGCCTGTAAGTGCTCCGCCAAATCAGGAATCACCTCTTCTGGCAGACCTTTTTCTACGTGCGTCATGTTTTCATTAATGCCGAATTTCTGCCGCAGAGCTct                                                                                                                                                                                                                                                                                                         <  1:140433‑M1/293‑3 (MQ=255)                 tttgatatcatgctgctaatcgccctgatgcttcaactaacatgttggcttgcgggcgttcatgctcagaaacaaggttgggacaagcacttccaggctaacacagtcagaaatcgaaacgtactctcaacagttcgcttaggcatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagCGCAGAGCTTTCATTGCCAGCAAATGt                                                                                                                                                                                                                                                                                         <  1:336386‑M2/27‑1 (MQ=255)                            agagTCGTTAATCGTCTTCTTCGTCATCCAGTTCAACGGGTGTCTGATACTGGTCAGGTTTAATGACCAACAGATCGCAGCGAAGATGATCAATCACCTGTTCCGCCGTGTTGCCGAGGAATGCTGCTGAAATACCGGTGCGTCCTACCGTGCCCAGAACCACAATCCCCGCCTGTAAGTGCTCCGCCAAATCAGGAATCACCTCTTCTGGCAGACCTTTTTCTACGTGCGTCATGTTTTCATTAATGCCGAATTTCTGCCGCAGAGCTctgatgaatcccctaatgattttggtaaa                                                                                                                                                                                                                                                                              >  1:120925‑M1/1‑269 (MQ=255)                                        cctgatgcttcaactaacatgttggcttgcgggcgttcatgctcagaaacaaggttgggacaagaacttccaggctaacacagtcagaaatcgaaacgtactctcaaccgttcgcttaggcatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgccaccctactagctcaaaatttattcacacatggttacgctttggggagattatgaggggatccctcatCGCAGATCTTTCATTGCCAGCAAACATTGCCCACGAATGGCatcgtacac                                                                                                                                                                                                                                                                  >  2:167302‑M2/249‑294 (MQ=255)                                           cttcttCGTCATCCAGTTCACCGGGTGTATGTTACTGGTCAGGTTTAAAGACCAACAGCTAGCAGCGAAGATGAGAAATCACCTGTGCCGCCGTGGTGCCAAGGAATGCTGCTGAAATACCGGTGCGTCCTACCGTGCCCAGAACCACAATCCCCGCCTGTAAGTGCTCCGCCAAATCAGGAATCACCTCTTCTGGCAGACCTTTTTCTACGTGCGTCATGTTTTCATTAATGCCGAATTTCTGCCGCAGAGCTctgatgaatcccctaatgattttggtaaaaatcattaagttaag                                                                                                                                                                                                                                                               <  2:120925‑M1/298‑45 (MQ=255)                                               cttcaactaacatgttggcttgcgggcgttcatgctcagaaacaaggttgggacaagcacttccaggctaacacagtcagaaatcgaaacgtactctcaacagttcgcttaggcatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagCGCAGAGCTTTCATTGCCAGCAAATGTTGCCCACGAATGGCATCGTTATAAACGCTc                                                                                                                                                                                                                                                           <  1:141558‑M2/57‑1 (MQ=255)                                                  gTCATCCAGTTCAACGGGTGTCTGATACTGGTCAGGTTTAATGACCAACAGATCGCAGCGAAGATGATCAATCACCTGTTCCGCCGTGTTGCCGAGGAATGCTGCTGAAATACCGGTGCGTCCTACCGTGCCCAGAACCACAATCCCCGCCTGTAAGTGCTCCGCCAAATCAGGAATCACCTCTTCTGGCAGACCTTTTTCTACGTGCGTCATGTTTTCATTAATGCCGAATTTCTGCCGCAGAGCTctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggata                                                                                                                                                                                                                                                        <  1:270800‑M1/298‑52 (MQ=255)                                                       aacatgttggcttgcgggcgttcatgctcagaaacaaggttgggacaagcacttccaggctaacacagtcagaaatcgaaacgtactctcaacagttcgcttaggcatggaagttttgcggctttctggctacacaataacaaaggaagacttactcgtggctgcacccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagCGCAGAGCTTTCATTGCCAGCAAATGTTGCCCACGAATGGCATCGTTATAAACGCTCGGATCaaa                                                                                                                                                                                                                                                   >  1:248331‑M2/234‑298 (MQ=255)                                                         catgttggcttgcgggcgttcatgctcagaaacaaggttgggacaagcacttccaggctaacacagtcagaaatcgaaacgtactctcaacagttcgcttaggcctggaagttttgcggcattctggctacaaaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacattgttccgccttggggaaattatgaggggatctctcagCGCAGAGCTTTCATTGCCAGACAATGTTCGCCCCTAATGGCAACGTTAtaaacgctcgcgacaacaa                                                                                                                                                                                                                                                 >  2:221138‑M2/232‑289 (MQ=255)                                                          gTTCAACGGGTGTCTGATACTGGTCAGGTTTAATGACCAACAGATCGCAGCGAAGATGATCAATCACCTGTTCCGCCGTGTTGCCGAGGAATGCTGCTGAAATACCGGTGCGTCCTACCGTGCCCAGAACCACAATCCCCGCCTGTAAGTGCTCCGCCAAATCAGGAATCACCTCTTCTGGCAGACCTTTTTCTACGTGCGTCATGTTTTCATTAATGCCGAATTTCTGCCGCAGAGCTctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggatacacatctt                                                                                                                                                                                                                                                <  1:87183‑M1/298‑60 (MQ=255)                                                            tCAACGGGTGACTGATACTGGTCAGGTTTAATGACCAACAGATCGCAGCGAAGATGATCAATCACCTGTTCCGCCGTGTTGCCGAGGAATGTTGCTGAAATACCGGTGCGTCCTACCGTGCCCAGAACCACAATCCCCGCCTGTAAGTGCTCCGCCAAATCAGGAATCACCTCTTCTGGCAGACCTTTTTCTACGTGCGTCATGTTTTCATTAATGCCGAATTTCTGCCGCAGAGCTctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggatacacatcttgt                                                                                                                                                                                                                                              <  1:263265‑M1/298‑62 (MQ=255)                                                                cGGGTGTCTGATACTGGTCAGGTTTAATGACCAACAGATCGCAGCGAAGATGATCAATCACCTGTTCCGCCGTGTTGCCGAGGAATGCTGCTGAAATACCGGTGCGTCCTACCGTGCCCAGAACCACAATCCCCGCCTGTAAGTGCTCCGCCAAATCAGGAATCACCTCTTCTGGCAGACCTTTTTCTACGTGCGTCATGTTTTCATTAATGCCGAATTTCTGCCGCAGAGCTctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggatacacatcttgtcata                                                                                                                                                                                                                                          >  1:305064‑M1/1‑233 (MQ=255)                                                                 cttgcgggcgttcatgctcagaaacaaggttgggacaagcacttccaggctaacacagtcagaaatcgaaacgtactctcaacagttcgcttaggcatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagCGCAGCGCTTTCATTGCCATCAAATGTTGCCCACGAATGGACTCGTTATTAACGCCCGGATCAAATTCcggccat                                                                                                                                                                                                                                         >  2:262956‑M2/224‑295 (MQ=255)                                                                       ggcgttcatgctcagaaacaaggttgggacaagcacttccaggctaacacagtcagaaatcgaaacgtactctcaacagttcgcttaggcatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagCGCAGAGCTTTCATTGCCAGCAAATGTTGCCCACGAATGGCATCGTTATAAACGCTCGGATCAAATTCCGGCAGTTCAATc                                                                                                                                                                                                                                   >  1:27397‑M2/218‑298 (MQ=255)                                                                                         aaTGACCAACAGATCGCAGCGAAGATGATCAATCACCTGTTCCGCCGTGTTGCCGAGGAATGCTGCTGAAATACCGGTGCGTCCTACCGTGCCCAGAACCACAATCCCCGCCTGTAAGTGCTCCGCCAAATCAGGAATCACCTCTTCTGGCAGACCTTTTTCTACGTGCGTCATGTTTTCATTAATGCCGAATTTCTGCCGCAGAGCTctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggatacacatcttgtcatatgatcaaatggtttcgcgaaaaatc                                                                                                                                                                                                                 >  1:222520‑M1/1‑208 (MQ=255)                                                                                            gACCAACAGATCGCAGCGAAGATGATCAATCACCTGTTCCGCCGTGTTGCCGAGGAATGCTGCTGAAATACCGGTGCGTCCTACCGTGCCCAGAACCACAATCCCCGCCTGTAAGTGCTCCGCCAAATCAGGAATCACCTCTTCTGGCAGACCTTTTTCTACGTGCGTCATGTTTTCATTAATGCCGAATTTCTGCCGCAGAGCTctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggatacacatcttgtcatatgatcaaatggtttcgcgaaaaatcaat                                                                                                                                                                                                              >  1:152718‑M1/1‑205 (MQ=255)                                                                                                    caagcacttccaggctaacacagtcagaaatcgaaacgtactctcaacagttcgcttaggcatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagCGCAGAGCTTTCATTGCCAGCAAATGTTGCCCACGAATGGCATCGTTATAAACGCTCGGATCAAATTCCGGCAGTTCAATCGCGATATTAATTGGCGTTACTGGGTAAgc                                                                                                                                                                                                      >  1:267311‑M2/189‑298 (MQ=255)                                                                                                            cGAAGATGATGAATCACCTGTTCCGCCGTGTTGCCGAGGAATGCTGCTGAAATACCGGTGCGTCCTACGGTGCCCAGAACCACAATCCCCGCCTGTAAGTGCTCTGCCAAATCAGGAATCACCTCTTCTGGCAGACCTTTTTCTACGTGCGTCATGTTTTCATTAATGCAGCATTTCTGCCGCAGAGCTctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggatacacatcttgtcatatgatcaaatggtttcgcgaaaaatcaataatcagacaacaagat                                                                                                                                                                                              <  1:299528‑M1/298‑110 (MQ=255)                                                                                                                        cagtcagaaatcgaaacgtactctcaacagttcgcttaggcatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagCGCAGAGCTTTCATTGCCAGCAAATGTTGCCCACGAATGGCATCGTTATAAACGCTCGGATCAAATTCCGGCAGTTCAATCGCGATATTAATTGGCGTTACTGGGTAAGCGCCAACCAGATGAACTTCgg                                                                                                                                                                                  >  1:220899‑M2/169‑298 (MQ=255)                                                                                                                        cagtcagaaatcgaaacgtactctcaacagttcgcttaggcatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagCGCAGAGCTTTCATTGCCAGCAAATGTTGCCCACGAATGGCATCGTTATAAACGCTCGGATCAAATTCCGGCAGTTCAATCGCGATATTAATTGGCGTTACTGGGTAAGCGCCAACCAGATGAACTTCgg                                                                                                                                                                                  <  1:221138‑M2/130‑1 (MQ=255)                                                                                                                                     aaacgtactctcaacagttcgcttaggcatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagCGCAGAGCTTTCATTGCCAGCAAATGTTGCCCACGAATGGCATCGTTATAAACGCTCGGATCAAATTCCGGCAGTTCAATCGCGATATTAATTGGCGTTACTGGGTAAGCGCCAACCAGATGAACTTCGGTATGGTTGACTTg                                                                                                                                                                     <  1:238625‑M2/143‑1 (MQ=255)                                                                                                                                      aacgtactctcaacagttcgcttaggcatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagCGCAGAGCTTTCATTGCCAGCAAATGTTGCCCACGAATGGCATCGTTATAAACGCTCGGATCAAATTCCGGCAGTTCAATCGCGATATTAATTGGCGTTACTGGGTAAGCGCCAACCa                                                                                                                                                                                              >  1:64272‑M2/155‑272 (MQ=255)                                                                                                                                      aacgtactctcaacagttcgcttaggcatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagCGCAGAGCTTTCATTGCCAGCAAATGTTGCCCACGAATGGCATCGTTATAAACGCTCGGATCAAATTCCGGCAGTTCAATCGCGATATTAATTGGCGTTACTGGGTAAGCGCCAACCa                                                                                                                                                                                              <  2:64272‑M2/118‑1 (MQ=255)                                                                                                                                        cgtactctcaacagttcgcttaggcatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagCGCAGAGCTTTCATTGCCAGCAAATGTTGCCCACGAATGGCATCGTTATAAACGCTCGGATCAAATTCCGGCAGTTCAATCGCGATATTAATTGGCGTTACTGGGTAAGCGCCAACCAGATGAACTTCGGTATGGTTGACTTGTTc                                                                                                                                                                  <  1:262956‑M2/146‑1 (MQ=255)                                                                                                                                               gAGGAATGCTGCTGAAATACCGGTGCGTCCTACCGTGCCCAGAACCACAATCCCCGCCTGTAAGTGCTCCGCCAAATCAGGAATCACCTCTTCTGGCAGACCTTTTTCTACGTGCGTCATGTTTTCATTAATGCCGAATTTCTGCCGCAGAGCTctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggatacacatcttgtcatatgatcaaatggtttcgcgaaaaatcaataatcagacaacaagatgtgcgaactcgatattttacacgactctctttacc                                                                                                                                                           <  1:162870‑M1/298‑145 (MQ=255)                                                                                                                                               gAGGAATGCTGCTGAAATACCGGTGCGTCCTACCGTGCCCAGAACCACAATCCCCGCCTGTAAGTGCTCCGCCAAATCAGGAATCACCTCTTCTGGCAGACCTTTTTCTACGTGCGTCATGTTTTCATTAATGCCGAATTTCTGCCGCAGAGCTctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggatacacatcttgtcatatgatcaaatggtttcgcgaaaaatcaataatcagacaacaagatgtgcgaactcgatattttacacgactctctttacc                                                                                                                                                           >  1:199644‑M1/1‑154 (MQ=255)                                                                                                                                                caacagttatattaggtagagaagttttgggggtgtccggttacacaagaacaggggaaggtgtaccctggtcttcaacccaactagctaaaaattttttcactcatggttacgatttggggaaattatgaggggatctctcagCGCAGAGCTTTCATTGCCAGCAAATGTTGCCCACGAAGGGCATCGTTATAAACGCTCGGATCAAATTCCGGCAGTTCAATCGCGATATTAATTGGCGTTACTGGGTAAGCGCCAACCAGATGAACTTCGGTATGGTTGACTTGTTCTGCCAGtt                                                                                                                                                          <  2:267798‑M2/154‑1 (MQ=255)                                                                                                                                                 aacagttcgcttaggcatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagCGCAGAGCTTTCATTGCCAGCAAATGTTGCCCACGAATGGCATCGTTATAAACGCTCGGATCAAATTCCGGCAGTTCAATCGCGATATTAATTGGCGTTACTGGGTAAGCGCCAACCAGATGAACTTCGGTATGGTTGACTTGTTCTGCCAGTTc                                                                                                                                                         >  1:275007‑M2/144‑298 (MQ=255)                                                                                                                                                  gAATGCTGCTGAAATACCGGTGCGTCCTACCGTGCCCAGAACCACAATCCCCGCCTGTAAGTGCTCCGCCAAATCAGGAATCACCTCTTCTGGCAGACCTTTTTCTACGTGCGTCATGTTTTCATTAATGCCGAATTTCTGCCGCAGAGCTctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggatacacatcttgtcatatgatcaaatggtttcgcgaaaaatcaataatcagacaaaaagatgtgagaactcgatatttaaaagaactccctttaccaag                                                                                                                                                        >  2:335838‑M1/1‑151 (MQ=255)                                                                                                                                                         gcttaggcatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagCGCAGAGCTTTCATTGCCAGCAAATGTTGCCCACGAATGGCATCGTTATAAACGCTCGGATCAAATTCCGGCAGTTCAATCGCGATATTAATTGGCGTTACTGGGTAAGCGCCAACCAGATGAACTTCGGTATGGTTGACTTGTTCTGCCAGTTCGATCGtct                                                                                                                                                 >  1:79559‑M2/136‑298 (MQ=255)                                                                                                                                                            taggcatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagCGCAGAGCTTTCATTGCCAGCAAATGTTGCCCACGAATGGCATCGTTATAAACGCTCGGATCAAATTCCGGCAGTTCAATCGCGATATTAATTGGCGTTACTGGGTAAGCGCCAACCAGATGAACTTCGGTATGGTTGACTTGTTCTGCCAGTTCGATCGTCTCtt                                                                                                                                              <  1:332198‑M2/166‑1 (MQ=255)                                                                                                                                                                        ttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagCGCAGAGCTTTCATTGCCAGCAAATGTTGCCCACGAATGGCATCGTTATAAACGCTCGGATCAAATTCCGGCAGTTCAATCGCGATATTAATTGGCGTTACTGGGTAAGCGCCAACCAGATGAACTTCGGTATGGTTGACTTGTTCTGCCAGTTCGATCGTCTCTTTGACCAGttttt                                                                                                                                  >  1:53818‑M2/121‑298 (MQ=255)                                                                                                                                                                         gTCCTACCGTGCCCAGAACCACAATCCCCGCCTGTAAGTGCTCCGCCAAATCAGGAATCACCTCTTCTGGCAGACCTTTTTCTACGTGCGTCATGTTTTCATTAATGCCGAATTTCTGCCGCAGAGCTctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggatacacatcttgtcatatgatcaaatggtttcgcgaaaaatcaataatcagacaacaagatgtgcgaactcgatattttacacgactctctttaccaattctgccccgaattacacttaaaa                                                                                                                                 <  1:200797‑M1/298‑171 (MQ=255)                                                                                                                                                                               ccGTGCCCAGAACCACAATCCCCGCCTGTAAGTGCTCCGCCAAATCAGGAATCCCCTCTTCTGGCAGACCTTTTTCTACGTGCGTCATGTTTTCATTCATGCCGAATTTCTGCCGCAGAGCTctgctgaatcccctactgactttgttaaaaatcattaagttaaggttgttacacatcttgtcctatgatcacatggtttcgcgaaaaatcaataaccagacaacaagatgtgcgaactcgatattttaaacgactctctttaccaattctgccccaacttacccttaaaaccaaca                                                                                                                           >  2:3009‑M1/1‑122 (MQ=255)                                                                                                                                                                               ccGTGCCCAGAACCACAATCCCCGCCTGTAAGTGCTCCGCCAAATCAGGAATCACCTCTTCTGGCAGACCTTTTTCTACGTGCGTCATGTTTTCATTAATGCCGAATTTCTGCCGCAGAGCTctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggatacacatcttgtcatatgatcaaatggtttcgcgaaaaatcaataatcagacaacaagatgtgcgaactcgatattttacacgactctctttaccaattctgccccgaattacacttaaaacgactc                                                                                                                           <  1:335838‑M1/298‑177 (MQ=255)                                                                                                                                                                                    ctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagCGCAGAGCTTTCATTGCCAGCAAATGTTGCCCACGAATGGCATCGTTATAAACGCTCGGATCAAATTCCGGCAGTTCAATCGCGATATTAATTGGCGTTACTGGGTAAGCGCCAACCAGATGAACTTCGGTATGGTTGACTTGTTCTGCCAGTTCGATCGTCTCTTTGACCAGTTTTTCATTGAGTGCAt                                                                                                                      <  1:260486‑M2/190‑1 (MQ=255)                                                                                                                                                                                          acacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgacttcgggaaattatgcggggatctctcagCGCAGAGCTTTCATTGCCAGCAACTGTTTCCCACGAATCGCCTCGTTATCAACGCTCGGATCAAATTCCGGCAGTTCAATCGCCATATTACTTGCCGTTATTGGGTAAGCGCCACACAGATGAACTTCGGTTTGGTTTCCTTTTTCTGCCCGGTCGATAGTCTCTTTCACCCGATTTTCCTCTAGTGCCTTATGAt                                                                                                                >  2:263816‑M2/103‑298 (MQ=255)                                                                                                                                                                                                    ccGCCTGTAAGTGCTCCGCCAAATCAGGAATCACCTCTTCTGGCAGACCTTTTTCTACGTGCGTCATGTTTTCATTAATGCCGAATTTCTGCCGCAGAGCTctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggatacacatcttgtcatatgatcaaatggtttcgcgaaaaatcaataatcagacaacaagatgtgcgaactcgatattttacacgactctctttaccaattctgccccgaattacacttaaaacgactcaacagcttaacgttggcttgc                                                                                                      <  1:50272‑M1/298‑198 (MQ=255)                                                                                                                                                                                                         aagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagCGCAGAGCTTTCATTGCCAGCAAATGTTGCCCACGAATGGCATCGTTATAAACGCTCGGATCAAATTCCGGCAGTTCAATCGCGATATTAATTGGCGTTACTGGGTAAGCGCCAACCAGATGAACTTCGGTATGGTTGACTTGTTCTGCCAGTTCGATCGTCTCTTTGACCAGTTTTTCATTGAGTGCATTATGATACGGCTCTTCACTgg                                                                                                 >  1:238492‑M2/88‑298 (MQ=255)                                                                                                                                                                                                              gTGCTCCGCAAAAGTATGTATCACCTCTTCTGGCAGACCTTTGTCTACGTGCGTCAGGTTTTCATTAATGCTGAAGTTCTGCCTCAGAGCTctgatgactcccctaatgattttggtaaaaatcattaagtgaaggtggatacacatcttggcatatgatcaaatggtttcgcgaaaaatcaataatcagacaacaagatgtgcgaactcgatattttacacgactctctttaccaattctgccccgaattacacttaaaacgactcaacagcttaacgttggcttgccacgcattac                                                                                            <  2:309506‑M1/298‑208 (MQ=255)                                                                                                                                                                                                                     tggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagCGCAGAGCTTTCATTGCCAGCAAATGTTGCCCACGAATGGCATCGTTATAAACGCTCGGATCAAATTCCGGCAGTTCAATCGCGATATTAATTGGCGTTACTGGGTAAGCGCCAACCAGATGAACTTCGGTATGGTTGACTTGTTCTGCCAGTTCGATCGTCTCTTTGACCAGTTTTTCATTGAGTGCATTATGATACGGCTCTTCACTGGCGAGATTCACCg                                                                                     >  1:46883‑M2/76‑298 (MQ=255)                                                                                                                                                                                                                       tcgcgaaccccacgagctcaaaggttattcacgcatggttactgtttggggaaattatgagagagtctcttatCTCGGATATTTCAGTGGTAGCAAATGTGGCGCACGACTGGCATCGTTATAAACGCTGGGATCAAATTCCGGCAGTTCAATCGCGATATTAATTGGCGTTACTGGGTAAGCGCCAACCAGTTTAACTTCGGTATGGTTGACTTGTTCTGCCAGTTCGATCGTCTCTTTGACCAGTTTTTCATTGAGTGCATTATGATACGGCTCTTCACTGGCGAGATTCACCGcc                                                                                   <  2:238492‑M2/225‑1 (MQ=255)                                                                                                                                                                                                                             aGGAATCACCTCTTCTGGCAGACCTTTTTCTACGTGCGTCATGTTTTCATTAATGCCGAATTTCTGCCGCAGAGCTctgatgaatcccctaatgattctggtaaaaatcattaagttaaggtcgatacacatcttgtcatatgatcaaatggtttcgcgaaaaatcaataatcagacaacaagatgtgcgaactccatattttacaccactctctttactaattctgccccgaattacacttaaaacgaccaaacagcttaacttttatctgccacgcattacttctctgcaaacatt                                                                             >  2:126468‑M1/1‑76 (MQ=255)                                                                                                                                                                                                                                   ctagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagCGCAGAGCTTTCATTGCCAGCAAATGTTGCCCACGAATGGCATCGTTATAAACGCTCGGATCAAATTCCGGCCGTTCAATCGCGAGCTTCATTGGCGTTACTGGGTAAGCGCCAACCAGATGAACTTCGGTAAGGTTGACTTGTTCTCCCAGTTCGATCGTCTCTTTGACCAGTTGTTGATTTAGTGCTTTAGTTTCGGGCCCTTTCCTGCCGATATTCCCCGCCCCCCGCCTCTTa                                                                       >  2:332641‑M2/62‑298 (MQ=255)                                                                                                                                                                                                                                    aCCTCTTCTGGCAGACCTTTTTCTACGTGCGTCATGTTTTCATTAATGCCGAATTTCTGCCGCAGAGCTctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggatacacatcttgtcatatgatcaaatggtttcgcgaaaaatcaataatcagacaacaagatgtgcgaactcgatattttacacgactctctttaccaattctgcccagaattacacttaaaacgacgcaacagcttaacgttggcttgccacgcattacttgactgtaaaactctcactct                                                                      >  1:182521‑M1/1‑69 (MQ=255)                                                                                                                                                                                                                                       ctaaaaatttattcacacagggttgagctgtgggaaaagtatgaggggctctctaagCGCGGAGCTTTCATTGCCAGCAAATGTTGCCCACGAATTGCATCGTGATAAACGCTCGTATCAAATTCCGGCAGTTCAATCGCGATATGAATTGGCGTTACTGGGTAAGCGCCAACCAGATGAACTTCGGTATGGTTGACTTGTTCTGCCAGTTCGATCGTCTCTTTGACCAGTTTTTCATTGAGTGCATTATGATACGGCTCTTCACTGGCGAGATTCACCGCCACCAGCGCCTTAcctc                                                                   <  2:27397‑M2/241‑1 (MQ=255)                                                                                                                                                                                                                                               cAGACC‑TTTTCTACGTGCGTCATGTTTTCATTAATGCCGAATTTCTGCCGCAGAGCTctgatgaatcccctaatgattttggtaaacatcattaagttaaggtggatacacatcttgtcatatgatcaaatggtttcgcgaaaaatcaataatcagacaacaagatgtgcgaactcgacattttacacgactctctttaccaattctgccccgaattacacttaacacgactaaacaccttaacgttggcttgccccccattccttgacttcaatactctctccattacctaaccttg                                                          >  2:146311‑M1/1‑57 (MQ=255)                                                                                                                                                                                                                                                  ttcacacatggttacgcttttgggaaattatgaggggatctctcagCGCAGAGCTTTCATTGCCAGCAAATGTTGCCCACGAATGGCATCGTTATAAACGCTCGGATCAAATTCCGGCAGTTCAATCGCGATATTAATTGGCGTTACTGGGTAAGCGCCAACCAGATGAACTTCGGTATGGTTGACTTGTTCTGCCAGTTCGATCGTCTCTTTGACCAGTTTTTCATTGAGTGCATTATGATACGGCTCTTCACTGGCGAGATTCACCGCCACCAGCGCCTTACCTCCTTCCGGCCAc                                                        <  1:113374‑M2/252‑1 (MQ=255)                                                                                                                                                                                                                                                    cacacatggttacgctttggggaaattatgaggggatctctcagCGCAGAGCTTTCATTGCCAGCAAATGTTGCCCACGAATGGCATCGTTATAAACGCTCGGATCAAATTCCGGCAGTTCAATCGCGATATTAATTGGCGTTACTGGGTAACCGCCAACCAGCTGAACTTCGGTATGGTTGACTTGTTCTGCCAGTTCGATCGTCTCTTTGACCAGTTTTTCATTGAGTTCATTATGATACGGCCCTTCACTGGCGAGATTCCACTCCACCAGCGCCTTACCCCCTTCCGCCCACgg                                                      >  2:318574‑M2/45‑298 (MQ=255)                                                                                                                                                                                                                                                           tACGTGCGTCATGTTTTCATTAATGCCGAATTTCTGCCGCAGAGCTctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggatacacatcttgtcatatgatcaaatggtttcgcgaaaaatcaataatcagacaacaagatgtgcgaactcgatattttacacgactctctttaccaattctgccccgaattacacttaaaacgactcaacagcttaacgttggcttgccacgcattacttgactgtaaaactctcactcttaccgaacttggccgtaacctgc                                               <  1:3009‑M1/298‑253 (MQ=255)                                                                                                                                                                                                                                                                   tCATGTTTTCATTAATGCCGAATTTCTGCCGCAGAGCTctgatgaatcccctaatgattttcgtaaaaatcattaagttaaggtggatacacatattgtcatatgatcacatggtttcgcgaaaaatcactaatcagacaacaagatgtgcgaactcgatattttacacgactatctttaccaattctgccccgaattccacttaaaacgactaaacaacttaacgttggcttgccacgcattacttcactgtaaaactcccactctttccgaacttggccgtaacctgccacccaca                                       >  2:34956‑M1/1‑38 (MQ=255)                                                                                                                                                                                                                                                                       gggaaattatgaggggatctctcagCGCAGAGCTTTCATTGCCAGCGAATGTTGCCCACGAATGGCATCGTTATAAACGCTCGGATCAAATTCCGGCAGTTCAATCGCGATATTAATTGGCGTTACTGGGTAAGCGCCAACCAGATGAACTTCGGTATGGTTGACTTGTTCTGCCAGTTCGATCGTCTCTTTGACCAGTTTTTCATTGAGTGCATTATGATACGGCTCTTCACTGGCGAGATTCACCGCCACCAGCGCCTTACCTCCTTCCGGCCACGGCTGGTCTTTCACCATCcac                                   <  1:103357‑M2/273‑1 (MQ=255)                                                                                                                                                                                                                                                                       gggaaattatgaggggatctctcagCGCAGAGCTTTCATTGCCAGCAAATGTTGCCCACGAATGGCATCGTTATAAACGCTCGGATCAAATTCCGACAGTTCAATCGCGATATTAATTGGCGTTACTGGGTAAGCGCCAACCAGATGAACTTCGGTATGGTTGACTTGTTCTGCCAGTTCGATCGTCTCTTTGACCAGTTTTTCATTGAGTGCATTATGATACGGCTCTTCACTGGCGAGATTCACCGCCACCAGCGCCTTACCTCCTTCCGGCCACGGCTGGTCTTTCACCATCcac                                   >  1:208789‑M2/26‑298 (MQ=255)                                                                                                                                                                                                                                                                               atgaggggatctctcagCGCAGAGCTTTCATTGCCAGCAAATGTTGCCCACGAATGGCATCGTTATAAACGCTCGGATCAAATTCCTGCAGTTCAACCGCGATATTAATTGCCGTTACCGGGTAAGCGCCAACCAGATGAACTCCGGTATGGTTGACTTGTTCTGCCAGTTCTATAGTCCCTTTGACCAGTTTTTCATTGAGTGCATTATTATACGGCTCTTCACTGGCGAGATTCACCCCCACCACCGCCTTACCCCCCTCCGTCCACGGCTGCTCTTTCTCCACCCACACCGGCCt                           >  2:179957‑M2/18‑298 (MQ=255)                                                                                                                                                                                                                                                                               atgaggggatctctcagCGCAGAGCTTTCATTGCCAGCAAATGTTGCCCACGAATGGCATCGTTATAAACGCTCGGATCAAATTCCGGCAGTTCAATCGCGATATTAATTGGCGTTACTGGGTAAGCGCCAACCAGATGAACTTCGGTATGGTTGACTTGTTCTGCCAGTTCGATCGTCTCTTTGACCAGTTTTTCATTGAGTGCATTATGATACGGCTCTTCACTGGCGAGATTCACCGCCACCAGCGCCTTACCTCCTTCCGGCCACGGCTGGTCTTTCACCATCCACACCGGGCt                           <  1:150852‑M2/281‑1 (MQ=255)                                                                                                                                                                                                                                                                                tgaggggatctctcagCGCAGAGCTTTCATTGCCAGCAAATGTTGCCCACGAATGGCATCGTTATAAACGCTCGGATCAAATTCCGGCAGTTCAATCGCGATATTAATTGGCGTTACTGGGTAAGCGCCAACCAGATGAACTTCGGTATGGTTGACTTGTTCTGCCAGTTCGATCGTCTCTTTGACCAGTTTTTCATTGAGTGCATTATGATACGGCTCTTCACTGGCGAGATTCACCGCCACCAGCGCCTTACCTCCTTCCGGCCACGGCTGGTCTTTCACCATCCACACCGGGCtt                          >  1:1567‑M2/17‑298 (MQ=255)                                                                                                                                                                                                                                                                                    gggttctctcagCGCAGATCTTGCATTGCCAGCAAAGGTTGCCCTCGAATGGCATCGTTATAAACGCTCGGATCAAATTCCGGCAGTTCAATCGCGATATTAATTGGCGTTACTGGGTAAGCGCCAACCAGATGAACTTCTGTATGGTTGACTTGTTCTGCCAGTTCGATCGTCTCTTTGACCAGTTTTTCATTGAGTGCATTATGATACGGCTCTTCACTGGCGAGATTCACCGCCACCAGCGCCTTACCTCCTTCCGGCCACGGCTGGTCTTTCACCATCCACACCGGGCTTGGGc                      <  2:267311‑M2/286‑1 (MQ=255)                                                                                                                                                                                                                                                                                      gatctctcagCGCAGAGCTTTCATTGCCAGCAAATGTTGCCCACGAATGGCATCGTTATAAACGCTCGGATCAAATTCCGGCAGTTCAATCGCGATATTAATTGGCGTTACTGGGTAAGCGCCAACCAGATGAACTTCGGTATGGTTGACTTGTTCTGCCAGTTCGATCGTCTCTTTGACCAGTTTTTCATTGAGTGCATTATGATACGGCTCTTCACTGGCGAGATTCACCGCCACCAGCGCCTTACCTCCTTCCGGCCACGGCTGGTCTTTCACCATCCACACCGGGCTTGGGCAt                    <  1:167302‑M2/288‑1 (MQ=255)                                                                                                                                                                                                                                                                                                agcgtagttctgaggaatcaccaaatgacttttgtaaaaatcattaatttaaggatgatacacatcttttcatatgatcaaatggtttctcgaaaaatcaatcatcagacaactagtggtgcgaactggatattgtacacggctctctttaccaattcggccccgaatgacacttaaaacgactcaacagcttaacgttggctggccacgcattacttgactgtaaaactctcactcttaccgaacttggccgtaacctgccaaccaaagcgagaacaaaacataacatcaaacgaat          <  2:330288‑M1/290‑290 (MQ=255)                                                                                                                                                                                                                                                                                                    gagCTTCCATTACCAGCAAATGTTCCCCACGAATGGCATCGTTATAAACGCTCGGATCAAATTCCGGCAGTTCCATCGCGATATTAATTGGCGTTACTGGGAAAGCGCCAACCAGATGAACTTCGGTATGGTTGACTTGTTCTGCTAGTTCCATCGTCGCTTTGACCAGTTTTTCATTGCGTCCATTAAGATACGGCCCTTCACCGGCGAGATTTCCACACACCAACTCCTTACCTCCCTACGGCACCTGCTGGTCTTTCACCACCCAACCCTGGCCTTGCCAtttcagcctccgatt      >  2:18427/1‑286 (MQ=255)                                                                                                                                                                                                                                                                                                     tgatcttatgaataccctaatgagtttagtaaaaatcattaagttaaggtggataaacatcttgtcaaatgatcaaatggtttcgcgaaaaatcaataatcagataacaagatgtgcgaactctatattttacacgactctctttaccaattctgccccgaattacacttaaaacgactcaacagcttaacgttggcttgccacgcattacttgactgtaaaactctcactcttaccgaacttggccgtaacctgccaaccaaagcgagaacaaaacataacatcaaacgaatcgacc     <  2:72752‑M1/295‑295 (MQ=255)                                                                                                                                                                                                                                                                                                       ctctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggatacacatcttgtcatatgatcaaatggtttcgcgaaaaatcaataatcagacaacaagatgtgcgaactcgatattttacacgactctctttaccaattctgccccgaattacacttaaaacgactcaacagcttaacgttggcttgccacgcattacttgactgtaaaactctcactcttaccgaacttggccgtaacctgccaaccaaagcgagaacaaaacataacatcaaacgaatcgaccga   >  1:86816‑M1/1‑2 (MQ=255)                                                                                                                                                                                                                                                                                                        tctgatgaatgccataaagattttgttaataatcattaagttaaggtggatatacatcttgtcctatgatcaaatggtttctcgaaaaatcaataatcagacaacaatatctgcgtactcgatattttacacgactctctttaccaattctgccccgaattacacttaaaacgactcaaccgcttatcggtggcttgccacgcattacttgactgtaaaactctcactcttaccgaacttggccgtaacctgccaaccaaagcgagaacaaaacataacatcaaacgaatcgaccgat  <  2:281394‑M1/298‑298 (MQ=255)                                                                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                                                                          GATAACTCGGGCCTTGTCAGTTATTGAAGAGTCGTTAATCGTCTTCTTCGTCATCCAGTTCAACGGGTGTCTGATACTGGTCAGGTTTAATGACCAACAGATCGCAGCGAAGATGATCAATCACCTGTTCCGCCGTGTTGCCGAGGAATGCTGCTGAAATACCGGTGCGTCCTACCGTGCCCAGAACCACAATCCCCGCCTGTAAGTGCTCCGCCAAATCAGGAATCACCTCTTCTGGCAGACCTTTTTCTACGTGCGTCATGTTTTCATTAATGCCGAATTTCTGCCGCAGAGCTTTCATTGCCAGCAAATGTTGCCCACGAATGGCATCGTTATAAACGCTCGGATCAAATTCCGGCAGTTCAATCGCGATATTAATTGGCGTTACTGGGTAAGCGCCAACCAGATGAACTTCGGTATGGTTGACTTGTTCTGCCAGTTCGATCGTCTCTTTGACCAGTTTTTCATTGAGTGCATTATGATACGGCTCTTCACTGGCGAGATTCACCGCCACCAGCGCCTTACCTCCTTCCGGCCACGGCTGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGTAACAGATGCCAG  >  CP006584/1435336‑1435928

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.