New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP006584	= 2253835	4 (0.140)	16 (0.600)	16/556	0.7	78.4%	coding (52/414 nt)	LY180_10760	hypothetical protein
	?	CP006584	= 2255646	5 (0.190)					coding (842/1284 nt)	LY180_10775	tail protein

ACTACGCCCCAGCCGGTCCAGCTTCCAGACTACCAGTGTATCCCCCTCCGATAATGTCCTGAGCAGTTTTTTCAGTCCCGGCCTGTCGGACTTCGTGCCGCTGATTTTGTCCTCAAAAATCAGCTCACATCCTGCGCACTCCAGCGCGTTACGCTGCAATTCCGTATTCTGGTCATTTGTTGACACGCGTACATAGCCAATAAGCATGAGCATCCCCCTGAATAAAAACCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAACGGGCAAAACCAAATTCCTGATATGTCAGCGTGGGAGTGTGGGGGAGATACAACGACGGGATGGAGGCGAAGCCCGGATGGTTATATTGAACAATGGGGGCTAACTGAGGCCACAACAAATGAAGTTTTGATTAATTTTCCTATCCCATTTCCGACAGCCGTCATTTCTATTAATGAACATGACCAGGCTCCTGTGGCAGGGAAAATGTCAGTATGGCAATTCTATAAATTGACTAACTCAAATGTCATAGCAGAGAACCTGGGATCTCTTG  >  CP006584/2253547‑2254129                                                                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                                                                       aatccgacatttaccggagaaccaaaagcgccgacgcctgccgcaggaaataacaccacgcggattgcgactactgcgtttgttcaggccgctattaccgctctgattaacggtgcgcctgccacgctggatacactgaaagaaattgcagcagccattaacaatgacccgaacttcagcaccaccattaacaatgcgctgtcaggtaagcaaccactggatgagacgatgactcatttgagtggaaaagatgcagctgtgcttcgcgcataccTTGTTTTCGGAGCAGCGGCAAAAc                                                                                                                                                                                                                                                                                               <  2:243967‑M1/24‑1 (MQ=255)                                            cccTCCGATAATGTCCTGAGCAGTTTTTTCAGTCCCGGCCTGTCGGACTTCGTGCCGCTGATTTTGTCCTCAAAAATCAGCTCACATCCTGCGCACTCCAGCGCGTTACGCTGCAATTCCGTATTCTGGTCATTTGTTGACACGCGTACATAGCCAATAAGCATGAGCATCCCCCTGAATAAAAACCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAACGGGCAAACCCAAATTCCTGATATGTCAGc                                                                                                                                                                                                                                                    >  1:114363/1‑298 (MQ=255)                                                           cTGAGCAGTTTTTTCAGTCCCGGCCTGTCGGACTTCGTGCCGCTGATTTTGTCCTCAAAAATCAGCTCACATCCTGCGCACTCCAGCGCGTTACGCTGCAATTCCGTATTCTGGTCATTTGTTGACACGCGTACATAGCCAATAAGCATGAGCATCCACCTGAATAAAAACCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGgtgctcaagctattggcgttccgttcttctggccctccgcggcaatgcaaaatactgtaatcgacag                                                                                                                                                                                                                                     >  1:86519‑M1/1‑231 (MQ=255)                                                                        tactgcgtttgttcaggccgctcttaccgctctgattaacggtgcgcctgccacgctggatacacttaaagaaattgccgcagccattaacaatgacccgaaattcagcaccaccattaacaatgcgctgtcaggtcagccaccactggatgagacgctgactcaatggagtggaaaagatgtgactcgtcttttcgcataccTTGGCTTGGGAGAAGCGCCAAAACGGGTTGCTGGTAACGGCCAACACCAAATTCCCGATAGGTATACCTGGGAGGTTTGGggacataccacagca                                                                                                                                                                                                                        <  2:220500‑M1/95‑8 (MQ=255)                                                                                 gCCTGTCGGACTTCGTGCCGCTGATTTTGTCCTCAAAAATCAGCTCACATCCTGCGCACTCCAGCGCGTTACGCTGCAATTCCGTATTCTGGTCATTTGTTGCCACGCGTACATAGCCAATAAGCATGAGCATCCCCCTGAATAAAAACCGGAGATGCTGCCAGTTGCCCGTTCTCCCTGCATTTTCATAAACGTTGGTTTGGGAGAAGgtgctccagctattcgcgttccgttcttctggcccctcgcggcactgccaaatactgtactcgacacctggtccagtacggtgtttttg                                                                                                                                                                                                               >  2:120082‑M1/1‑209 (MQ=255)                                                                                               ttaccgctctgattaacggtgcgcctgccacgctggatacactgcaagaaattgccgcagccattaacaatgacccgaaattcagcaccaccattaacaatccgctgtcaggtaagcaaccactggatgagccgctgactcatttgagtggaaaagatgttgctggtcttctcgcataccTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAACGGGCAAAACCAAATTCCTGAGATGTCAGCGGGGGGGTGGGGGGGAGATACAAAGACGGGACGGAGGTGAAacccgggggg                                                                                                                                                                                                 <  2:105637‑M1/118‑5 (MQ=255)                                                                                                 accgctctgattaacggtgcgcctgccacgctggatacactgaaagaaattgccgcagccattaacaatgacccgaaattcagcaccaccattaacaatgcgctgtcaggtaagcaaccactggatgagacgctgactcatttgcgtggaaaagctgtggccggtcttctcgcataccTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGGAACGGGCAAAACCAAATTCCTGATATGTCCGCGTGGGAGTGTGGGGGAGATACAACGACGGGAGGGACGAGaagcccggcggggt                                                                                                                                                                                               <  2:88600‑M1/120‑7 (MQ=255)                                                                                                  ccgctctgattaacggtgcgcctgccacgctggatacactgaaagcaattgccgcagccattaacaatgacccgaaattcagcaccaccattaacaatgcgctgtcaggtaagcaaccactggatgagacgctgactcatttgagtggaaaagatgtggctggtcttctcgcataccTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAACGGGCAAAACCAAATTCCTGATATGTAAGCGGGGGGGGGTGGGGGAGATAAAACGACGGGCGGGAAGCGTAGCCAGGTGGGTta                                                                                                                                                                                              <  2:281379‑M1/121‑1 (MQ=255)                                                                                                             gTCCTCAAAAATCAGCTCACATCCTGCGCACTCCAGCGCGTTACGCTGCAATTCCGTATTCTGGTCATTTGTTGACACGCGTACATAGCCAATAAGCATGAGCATCCCCCTGAATAAAAACCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAACGGGCAAAACCAAATTCCTGATATGTCAGCGTGGGAGTGTGGGGGAGATACAACGACGGGATGGAGGCGAAGCCCGGATGGTTATATTGAACAAt                                                                                                                                                                                   <  1:109376/298‑1 (MQ=255)                                                                                                               cggagcgccagccaagctgcatacatggcaagaactggacgcagccagtaacaaggacccgaaatacggcaccaacatgacacaggcgctgtcaggtaagcaaccactggatgagacgctgactcatttgagtggaaaagatggggctggtcttgtcgcataccTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGGAACGGGCAAAACCAAATTCCTGATATGTCAGCGTGGGAGTGTGGGGGAGATACAACGAGGGGATGGAGGCGAAGCCCGGATGGTTATATTGAACAATgg                                                                                                                                                                                 >  2:176194‑M1/165‑298 (MQ=255)                                                                                                                        tgccacgctggatacactgaaagaaattgccgcagccattaacaatgacccgaaattcagcaccaccattaacaatgcgctgtcaggtaagcaaccactggatgagacgctgactcatttgagtggaaaagatgtggctggtcttctcgcataccTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAACGGCAAAAACCAAATTCCTGATATCTCAGCGTGGGCGGGTGGGGGAGATACAACGACGGGCTGGCGGGGAAGCCCGGGTGGTTAATTTGAAAAATGGGGGGTAACt                                                                                                                                                                        <  2:240669‑M1/143‑1 (MQ=255)                                                                                                                           cacgctggatacactgaaagaaattgccgcagccattaacaatgacccgaaattcagcaccaccattaacaatgcgctgtcaggtaagcaaccactggatgagacgctgactcatttgagtggaaaagatgtggctggtcttctcgcataccTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAACGGGCAAAACCAAATTCCTGATATGTCAGCGTGGGAGTGTGGGGGAGATACAac                                                                                                                                                                                                                            >  2:232639‑M1/153‑243 (MQ=255)                                                                                                                           cacgctggatacactgaaagaaattgccgcagccattaacaatgacccgaaattcagcaccaccattaacaatgcgctgtcaggtaagcaaccactggatgagacgctgactcatttgagtggaaaagatgtggctggtcttctcgcataccTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAACGGGCAAAACCAAATTCCTGATATGTCAGCGTGGGAGTGTGGGGGAGATACAac                                                                                                                                                                                                                            <  1:232639‑M1/91‑1 (MQ=255)                                                                                                                             cgctggatacactgaaagaaattgccgcagccattaacaatgacccgaaattcagcaccaccattaacaatgcgctgtcaggtaagcaaccactggatgagacgctgactcatttgagtggaaaagaagtggctggtcttctcgcataccTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAACGGGCAAAACCAAATTCCTGATATGTCAGCGTGGGAGTGTGGGGGAGATACAACGACGGGATGGAGGCGAAGCCCGGATGGTTATATTGAACAATGGGGGCTAACTGAGGc                                                                                                                                                                   >  1:128590‑M1/151‑298 (MQ=255)                                                                                                                                 aTCCTGCGCACTCCAGCGCGTTACGCTGCAATTCCGTATTCTGGTCATTTGTTGACACGCGTACATAGCCAATAAGCATGAGCATCCCCCTGAATAAAAACCGGAGATGATGCCAGTTGCCCGTTATCTCTGAATTTTCATAAACGTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAACGGGCAAAACCAAATTCCTGATATGTCAGCGTGGGAGTGTGGGGGAGATACAACGACGGGATGGAGGCGAAGCCCGGATGGTTATATTGAACAATGGGGGCTAACTGAGGCcaca                                                                                                                                                               >  1:59482/1‑298 (MQ=255)                                                                                                                                     tGCGCACTCCAGCGCGTTACGCTGCAATTCCGTATTCTGGTCATTTGTTGACACGCGTACATAGCCAATAAGCATGAGCATCCCCCTGAATAAAAACCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAACGGGCAAAACCAAATTCCTGATATGTCAGCGTGGGAGTGTGGGGGAGATACAACGACGGGATGGAGGCGAAGCCCGGATGGTTATATTGAACAATGGGGGCTAACTGAGGCCAcaacaa                                                                                                                                                           <  1:329407/298‑1 (MQ=255)                                                                                                                                       cgcACTCCAGCGCGTTACGCTGCAATTCCGTATTCTGGTCATTTGTTGACACGCGTACATAGCCAATAAGCATGAGCATCCCCCTGAATAAAAACCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGgtgctccagctattggcgttccgttcttctggccctccgcggcaatgccaaatactgtaatcgacagctggtccagtatggtgtttttgaagtttaacggggcgaaattttctgcctctgattaccctgtgctggcgaaagtg                                                                                                                                                         <  1:222652‑M1/298‑144 (MQ=255)                                                                                                                                              cAGCGCGTTACGCTGCACTTCCGTATTCTGGTCATTTGTTGACACGCGTACATAGCCAATCAGCATGAGCATCCCCCTGAATAAAAACAGGAGATGATGCCAGTTGCCCGTTATCCCTGCATTTTCATAACCGTTGGTTTGGGAGAAGgtgctccagctcttggcgttccgttcttctggccctcctcggcaatgccaattactgtaatcgaccgctgttccattatcgtgtttttgaagtgtaacggggtgcatgtttctgcctctgcttatcctgtgctgtcgaaagtgtttcttt                                                                                                                                                  >  2:27094‑M1/1‑148 (MQ=255)                                                                                                                                                gcgcGTTACGCTGCAATTCCGTATTCTGGTCATTTGTTGACACGCGTACATAGCCAATAAGCATGAGCATCCCCCTGAATAAAAACCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGgtgctccagctattgtcgttccgttcttctggctctccgcggcaatgcccaattctgtaatcgacagcttgtccagtatggtgtttttgaagtttaacggggcgaaatttttttcctttgattgaccttggctggttaaagggtttccttct                                                                                                                                                >  2:63930‑M1/1‑146 (MQ=255)                                                                                                                                                  gcgTTACGCTGCAATTCCGTATTCTGGTCATTTGTTGACACGCGTACATAGCCAATAAGCATGAGCATCCCCCTGAATAAAAACCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGgtgctccagctattggcgttccgttcttctggccctccgcggcaatgccaaatactgtaatcgacagctggtccagtatggtgtttttgaagtttaacggggcgaaattttctgcctctgattaccctgtgctggcgaaagtgtttccttcgct                                                                                                                                              <  1:63930‑M1/298‑155 (MQ=255)                                                                                                                                                                   aatgacccgaaattcagcaccaccattaacaatgcgctgtcaggtaagcaaccactggatgagacgctgactcatttgagtggacaagatgtggctgctcttctcgcatcccGGCGTTTGTGCGAAGCGGCAACACGGGATGTCGGTAACGGGCAAACCCACATTCCTGATATGTCAGCGTGGGAGCGTGGGGGAGATACAACGACGGGAACGAGGCGACGCCCGGATGGGTATATTGAACAATGGGGGCTCACGGAGGCCAAAACAACGGAGCTTATGAGTAATATTCACATCCCAt                                                                                                                             <  2:333475‑M1/186‑1 (MQ=255)                                                                                                                                                                           gaaattcagcaccaccattaacaatgcgctgtcaggtaagcaaccactggatgagacgctgactcatttgagtggaaaagatgtggctggtcttctcgcataccTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAACGGGCAAAACCAAATTCCTGATATGTCAGCGTGGGAGTGTGGGGGAGATACAACGACGGGATGGAGGCGAAGCCCGGATGGTTATATTGAACAATGGGGGCTAACTGAGGCCACAACAAATGAAGTTTTGATTAATTTTCCTATCCCATTTCCGACa                                                                                                                     >  1:105637‑M1/105‑298 (MQ=255)                                                                                                                                                                                tcagcaccaccattaacaatgcgctgtcaggtaagcaaccactggatgagacgctgactcatttgagtggaaaagatgtggctggtcttctcgcataccTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAACGGGCAAAACCAAATTCCTGATATGTCAGCGTGGGAGGGTGGGGGAGATACAACGACGGGATGGAGGCGAAGCCCGGAGGGTTGTATTGAACCATGGGGGCTAAATGAGGCCACAACAAATAAAGTTTTGAGTAATTTTCCTCTCCCATTTCCGACAGCCGt                                                                                                                <  2:333438‑M1/199‑1 (MQ=255)                                                                                                                                                                                 cagcaccaccattaacaatgcgctgtcaggtaagcaaccactggatgagacgctgactcatttgagtggaaaagatgtggctggtcttctcgcataccTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAACGGGCAAAACCAAATTCCTGATATGTCAGCGTGGGAGTGTGGGGGAGATACAACGACGGGATGGAGGCGAAGCCCGGATGGTTATATTGAACAATGGGGGCTAACTGAGGCCACAACAAATGAAGTTTTGATTAATTTTCCTATCCCATTTCCGACAGCCGTc                                                                                                               >  1:220500‑M1/99‑298 (MQ=255)                                                                                                                                                                                     accaccattaacaatgcgctgtcaggtaagcaaccactggatgagacgctgactcatttgagtggaaaagatgtggctggtcttctcgcataccTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAACGGGCAAAACCAAATTCCTGATATGTCAGCGTGGGAGTGTGGGGGAGATACAACGACGGGATGGAGGCGAAGCCCGGATGGTTATATTGAACAATGGGGGCTAACTGAGGCCACAACAAATGAAGTTTTGATTAATTTTCCTATCCCATTTCCGACAGCCGTCAttt                                                                                                           <  1:36555‑M1/204‑1 (MQ=255)                                                                                                                                                                                      ccaccattaacaatgcgctgtcaggtaagcaaccactggatgagacgctgactcctttgagtggaaaagatgtggctggtctgctcgcctaccTTGGTTTGGGAGAAGAGGCAAAACGGGATGTGGGGAACGGGCAAAGCCAAATTCCTAATATGTCACCGTGGGCGTGAGGGGGAGCGACAACGACGGGATGGAGGCGAAGCCCGGAGGGTTGTATTCACAAACGGGCGCTAACTTAGGCCACACAAAATGAAGTTATGATTAATTTTCCTATCCCATTTCCGCcagacgtactgtc                                                                                                          <  2:99774‑M1/205‑7 (MQ=255)                                                                                                                                                                                         ccattaacaatgcgctgtcaggtaagcaaccactggatgagacgctgactcatttgagtggaaaagatgtggctggtcttctcgcataccTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAACGGGCAAAACCAAATTCCTGATATGTCAGCGTGGGAGTGTGGGGGAGATACAACGACGGGATGGAGGCGAAGCCCGGATGGTTATATTGAACAATGGGGGCTAACTGAGGCCACAACAAATGAAGTTTTGATTAATTTTCCTATCCCATTTCCGACAGCCGTCATTTCTAt                                                                                                       <  1:21522‑M1/208‑1 (MQ=255)                                                                                                                                                                                                caatgcgctgtcaggtaagcaaccactggatgagacgctgactcatttgagtggaaaagatgtggctggtcttctcgcataccTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAACGGGCAAAACCAAATTCCTGATATGTCAGCGTGGGAGTGTGGGGGAGATACAACGACGGGATGGAGGCGAAGCCCGGATGGTTATATTGAACAATGGGGGCTAACTGAGGCCACAACAAATGAAGTTTTGATTAATTTTCCTATCCCATTTCCGACAGCCGTCATTTCTATTAATGaa                                                                                                <  1:273302‑M1/215‑1 (MQ=255)                                                                                                                                                                                                  tAGCCAATAAGCATGAGCATCCCCCTGAATAAAAACCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGgtgctccagctattggcgttccgttcttctggccctccgcggcaatgccaaatactttaatcgaccgctggtccagtatggtgtttttgaagtttaacggggcgaaattttctgcctctgattaccctggcctggcgaaagtgtttccttcgctggtattacctgaagcccacgggtattcccttcgtttctgggatgatgg                                                                                              >  2:155017‑M1/1‑96 (MQ=255)                                                                                                                                                                                                        aTAAGCATGAGCATCCCCCTGAATAAAAACCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGgtgctccagctatttgcgttccgttcttctggccctccgcggcaatgccaaatactgtaatcgacagctggtccagtatggtgtttttgaagtttaacggggcgaaattttctgcctctgattaccctgtgctggcgaaagtgtttccttcgctggtattacctgaagcccgcggtgatttcattcgtgtctgggatgacgggcgagg                                                                                        >  1:171439‑M1/1‑90 (MQ=255)                                                                                                                                                                                                                  gCATCCCCCTGAATAAAAACCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGgtgctccagctattggcgttccgttcttctggccctccgcggcaatgccaaatactgtaatcgacagctggtccagtatggtgtttttgaagtttaacggggcgaaattttctgcctctgattaccctgtgctggcgaaagtgtttccttcgctggtattacctgaagcccgcggtgatttcattcgtgtctgggatgacgggcgaggtgcagatggt                                                                              >  1:139905‑M1/1‑80 (MQ=255)                                                                                                                                                                                                                   caaccactggatgagacgctgactcatttgagtggaaaagatgtggctggtcttctcgcataccTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAACGGGCAAAACCAAATTCCTGATATGTCAGCGTGGGAGTGTGGGGGAGATACAACGACGGGATGGAGGCGAAGCCCGGATGGTTATATTGAACAATGGGGGCTAACTGAGGCCACAACAAATGAAGTTTTGATTAATTTTCCTATCCCATTTCCGACAGCCGTCATTTCTATTAATGAACATGACCAGGCTCCTGTgg                                                                             >  1:333438‑M1/65‑298 (MQ=255)                                                                                                                                                                                                                        actggatgagacgctgactcatttgagtggaaaagatgtggctggtcttctcgcataccTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAACGGGCAAAACCAAATTCCTGATATGTCAGCGTGGGAGTGTGGGGGAGATACAACGACGGGATGGAGGCGAAGCCCGGATGGTTATATTGAACAATGGGGGCTAACTGAGGCCACAACAAATGAAGTTTTGATTAATTTTCCTATCCCATTTCCGACAGCCGTCATTTCTATTAATGAACATGACCAGGCTCCTGTGGCAggg                                                                        <  1:186666‑M1/239‑1 (MQ=255)                                                                                                                                                                                                                           tGAATAAAAACCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGgtgctccagctattggcgttccgttcttctggccctccgcggcaatgccaaatactgtaatcgacagctggtccagtatggtgtttttgaagtttaacggggcgaaattttctgcctctgattaccctgtgctggcgaaagtgtttccttcgctggtattacctgaagcccgcggtgatttcattcgtgtctgggatgacgggcgaggtgcagatggtggtcgcgaa                                                                     <  1:310239‑M1/298‑228 (MQ=255)                                                                                                                                                                                                                               tAAAAACCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGgtgctccagctattggcgttccgttcttctggccctccgcggcaatgccaaatactgtaatcgacagctggtccagtatggtgtttttgaagtttaacggggcgaaattttctgcctctgattaccctgtgctggcgaaagtgtttccttcgctggtattacctgaagcccgcggtgatttcattcgtgtctgggatgacgggcgaggtgcagatggtggtcgcgaattat                                                                 <  1:264005‑M1/298‑232 (MQ=255)                                                                                                                                                                                                                               gagacgctgactcatttgagtggaaaagatgtggctggtcttctcgcataccTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAACGGGCAAAACCAAATTCCTGATATGTCAGCGTGGGAGTGTGGGGGAGATACAACGACGGGATGGAGGCGAAGCCCGGATGGTTATATTGAACAATGGGGGCTAACTGAGGCCACAACAAATGAAGTTTTGATTAATTTTCCTATCCCATTTCCGACAGCCGTCATTTCTATTAATGAACATGACCAGGCTCCTGTGGCCGGGAAAATGt                                                                 <  1:202007‑M1/246‑1 (MQ=255)                                                                                                                                                                                                                                 gacgctgactcatttgagtggaaaagatgtggctggtcttctcgcataccTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAACGGGCAAAACCAAATTCCTGATATGTCAGCGTGGGAGTGTGGGGGAGATACAACGACGGGATGGAGGCGAAGCCCGGATGGTTATATTGAACAATGGGGGCTAACTGAGGCCACAACAAATGAAGTTTTGATTAATTTTCCTATCCCATTTCCGACAGCCGTCATTTCTATTAATGAACATGACCAGGCTCCTGTGGCAGGGAAAATGTCa                                                               <  1:108833‑M1/248‑1 (MQ=255)                                                                                                                                                                                                                                    aCCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGgtgctccagctattggcgttccgttcttctggccctccgcggcaatgccaaatactgtaatcgacagctggtccagtatggtgtttttgaagtttaacggggcgaaattttctgcctctgattaccctgtgctggcgaaagtgtttccttcgctggtattacctgaagcccgcggtgatttcattcgtgtctggtatgacgggcgaggtgcagatggtggtcgtgtattattaagc                                                            >  1:211353‑M1/1‑62 (MQ=255)                                                                                                                                                                                                                                       ggAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGgtgctccagctattggcgttccgttcttctggccctccgcggcaatgccaaatactgtaatcgacagctggtccagtatggtgtttttgaagtttaacggggcgaaattttctgcctctgattaccctgtgctggcgaaagtgtttccttcgctggtattacctgaagcccgcggtgatttcattcgtgtctgggatgacgggcgaggtgcagatggtggtcgcgaattattaagctgg                                                         >  1:102663‑M1/1‑59 (MQ=255)                                                                                                                                                                                                                                       gactcatttgagtggaaaagatgtggctggtcttctcgcataccTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAACGGGCAAAACCAAATTCCTGATATGTCAGCGTGGGAGTGTGGGGGAGATACAACGACGGGATgg                                                                                                                                                                                                                  >  2:147588‑M1/45‑145 (MQ=255)                                                                                                                                                                                                                                       gactcatttgagtggaaaagatgtggctggtcttctcgcataccTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAACGGGCAAAACCAAATTCCTGATATGTCAGCGTGGGAGTGTGGGGGAGATACAACGACGGGATgg                                                                                                                                                                                                                  <  1:147588‑M1/101‑1 (MQ=255)                                                                                                                                                                                                                                        actcatttgagtggaaaagatgtggctggtcttctcgcataccTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAACGGGCAAAACCAAATTCCTGATATGTCAGCGTGGGAGTGTGGGGGAGATACAACGACGGGATGGAGGCGAAGCCCGGATGGTTATATTGAACAATGGGGGCTAACTGAGGCCACAACAAATGAAGTTTTGATTAATTTTCCTATCCCATTTCCGACAGCCGTCATTTCTATTAATGAACATGACCAGGCTCCTGTGGCAGGGAAAATGTCAGTATGGc                                                        >  1:243967‑M1/44‑298 (MQ=255)                                                                                                                                                                                                                                             tttgagtggaaaagatgtggctggtcttctcgcataccTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAACGGGCAAAACCAAATTCCTGATATGTCAGCGTGGGAGTGTGGGGGAGATACAACGACGGGATGGAGGCGAAGCCCGGATGGTTATATTGAACAATGGGGGCTAACTGAGGCCACAACAAATGAAGTTTTGATTAATTTTCCTATCCCATTTCCGACAGCCGTCATTTCTATTAATGAACATGACCAGGCTCCTGTGGCAGGGAAAATGTCAGTATGGCAATTc                                                   >  1:53809‑M1/39‑298 (MQ=255)                                                                                                                                                                                                                                               tgCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGgtgctccagctattggcgttccgttcttctggccctccgcggcaatgccaaatactgtaatcgacagctggtccagtatggtgtttttgaagtttaacggggcgaaattttctgcctctgattaccctgtgatggcgaaagtgtttccttagctggtattacctgaagcccgcggtgatttcattcgtgtctgggatgccgggcgaggtgcgaagggtggtcgcgaattattaagctgtgacgcagc                                                 >  2:39928‑M1/1‑51 (MQ=255)                                                                                                                                                                                                                                                 ccAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGgtgctccagctattggcgttccgttcttctggccctccgcggcaatgccaaatactgtaatcgacagctggtccagtatggtgtttttgaagtttaacggggcgaaattttctgcctctgattaccctgtgctggcgaaagtgtttccttcgctggtattacctgaagcccgcggtgatttcattcgtgtctgggatgacgggcgaggtgcagatggtggtcgcgaattattaagctggcaggaagcta                                               <  1:35362‑M1/298‑250 (MQ=255)                                                                                                                                                                                                                                                                    gtcttctcgcataccTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAACGGGCAAAACCAAATTCCTGATATGTCAGCGTGGGAGTGTGGGGGAGATACAACGACGGGATGGAGGCGAAGCCCGGATGGTTATATTGAACAATGGGGGCTAACTGAGGCCACAACAAATGAAGTTTTGATTAATTTTCCTATCCCATTTCCGACAGCCGTCATTTCTATTAATGAACATGACCAGGCTCCTGTGGCAGGGAAAATGTCAGTATGGCAATTCTATAAATTGACTAACTCAAATGt                            >  1:281379‑M1/16‑298 (MQ=255)                                                                                                                                                                                                                                                                      aTTTTCATAAACGTTGGTTTGGGAGAAGgtgctacagctattggcgttccgttcttctggccctccgcggcaatgccaaatactgtaatcgacatctggtccagtatggtgtttttgaagtttaacggggcgaaattttctgcctatgattacactgttatggcgaaaatgtttccttcgcgggtactacccgaatctcgcggtgatgtcattcgcgtctggtagatcgtgcgaggtgcagattgtggtcccgacttagtacgctggcaggatgctacaagcttttgtcagtttgact                          >  2:268705‑M1/1‑28 (MQ=255)                                                                                                                                                                                                                                                                                              gaAGgtgctccagctattggcgttccgttcttctggccctccgcggcaatgccaaatactgtaatcgacagctggtccagtatggtgtttttgaagtttaacggggcgaaattttctgcctctgattaccctgtgctggcgaaagtgtttccttcgctggtattacctgaagcccgcggtgatttcattcgtgtctgggatgacgggcgaggtgcagatggtggtcgcgaattattaagctggcaggaagctacaaacttttctcagtttgccgggaatataggcggaggtgctggac  >  1:83295‑M1/1‑4 (MQ=255)                                                                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                                                                       ACTACGCCCCAGCCGGTCCAGCTTCCAGACTACCAGTGTATCCCCCTCCGATAATGTCCTGAGCAGTTTTTTCAGTCCCGGCCTGTCGGACTTCGTGCCGCTGATTTTGTCCTCAAAAATCAGCTCACATCCTGCGCACTCCAGCGCGTTACGCTGCAATTCCGTATTCTGGTCATTTGTTGACACGCGTACATAGCCAATAAGCATGAGCATCCCCCTGAATAAAAACCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAACGGGCAAAACCAAATTCCTGATATGTCAGCGTGGGAGTGTGGGGGAGATACAACGACGGGATGGAGGCGAAGCCCGGATGGTTATATTGAACAATGGGGGCTAACTGAGGCCACAACAAATGAAGTTTTGATTAATTTTCCTATCCCATTTCCGACAGCCGTCATTTCTATTAATGAACATGACCAGGCTCCTGTGGCAGGGAAAATGTCAGTATGGCAATTCTATAAATTGACTAACTCAAATGTCATAGCAGAGAACCTGGGATCTCTTG  >  CP006584/2253547‑2254129

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.