| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | CP006584 | 1,213,485 | Δ7 bp | intergenic (+184/‑105) | LY180_05705 → / → LY180_05710 | DNAse/PTS glucose transporter subunit IIBC |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP006584 | = 1213484 | 1 (0.020) | 29 (0.700) | 29/586 | 0.5 | 96.7% | intergenic (+183/‑112) | LY180_05705/LY180_05710 | DNAse/PTS glucose transporter subunit IIBC |
| ? | CP006584 | 1213492 = | 1 (0.020) | intergenic (+191/‑104) | LY180_05705/LY180_05710 | DNAse/PTS glucose transporter subunit IIBC | |||||
AAGGTGTTGCCGTTGAAGAACTGGCGCAGGTAACCACCGATAACTTCGCCCGTCTGTTTCACATCGACGCTTCCCGCCTTCAATCCATCCGTTGAATGAGTTTTTTTAAAGCTCGTAATTAATGGCTAAAACGAGTAAAGTTCACCGCCGAAAATTGGGCGGTGAATAACCGCGTTTGAAATATTGTGACATATGTTTTGTCAAAATGTGCAACTTCTCCAATGATCTGAAGTTGAAACGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTACTCTGTGTAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGTAAAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATCCTGCTGGGCGTCGGTTCCGCGAATTTCAGCTGGCTGCCCGCCGTTGTATCGCATGTTATGGCAGAAGCAGGCGGTTCCGTCTTTGCAAACAT > CP006584/1213207‑1213771 | aaGGTGTTGCCGTTGAAGAACTGGCGCAGGTAACCACCGATAACTTCGCCCGTCTGTTTCACATCGACGCTTCCCGCCTTCAATCCATCCGTTGAATGAGTTTTTTTAAAGCTCGTAATTAATGGCTAAAACGAGTAAAGTTCACCGCCGAAAATTGGGCGGTGAATAACCGCGTTTGAAATATTGTGACATATGTTTTGTCAAAATGTGCAACTTCTCCAATGATCTGAAGTTGAAACGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTACaataaataaagggcgcttag < 1:95842‑M1/298‑21 (MQ=255) ccGTTGAAGAACTGGCGCAGGTAACCACCGATAACTTCGCCCGTCTGTTTCACATCGACGCTTCCCGCCTTCAATCCATCCGTTGAATGAGTTTTTTTAAAGCTCGTAATTAATGGCTAAAACGATGAAAGTTCACCGCCGAAAATTGGGCGGTGAATAACCGCGTTTGAAATATTGTGACCTATGTTTTGTCAAAATGTGCAACTTCTCCAATGAGCTGAAGTTGAAACGTCATCGCCGCCCAACAAATTGGCCCCGAATTCTTTTACaataacaaaagggcgcttagatgcactgt > 2:36398‑M1/1‑269 (MQ=255) gaaCTGGCGCAGGTAACCACCGATAACTTCGCCCGTCTGTTTCACATCGACGCTTCCCGCCTTCAATCCATCCGTTGAATGAGTTTTTTTAAAGCTCGTAATTAATGGCTAAAACGAGTAAAGTTCACCGCCGAAAATTGGGCGGTGAATAACCGCGTTTGAAATATTGTGACATATGTTTTGTCAAAATGTGCAACTTCTCCAATGATCTGAAGTTGAAACGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTACaataaataaagggcgcttagatgccctgtacacggcg > 1:271764‑M1/1‑261 (MQ=255) tGGCGCAGGTAACCACCGATAACTTCGCCCGTCTGTTTCACATCGACGCTTCCCGCCTTCAATCCATCCGTTGAATGAGTTTTTTTAAAGCTCGTAATTAATGGCTAAAACGAGTAAAGTTCACCGCCGAAAATTGGGCGGTGAATAACCGCGTTTGAAATATTGTGACATATGTTTTGTCAAAATGTGCAACTTCTCCAATGATCTGAAGTTGAAACGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTACaataaataaagggcgcttagatgccctgtacacggcgaggc < 1:407638‑M1/298‑42 (MQ=255) tatccaccgggAAGTTCGCCCGTAGTTTTGACATGGACGGCGCCCTCCTTCAATCCATCCGTTGAATGAGTTTTTTTAAAGCTCGTAATTAATGGCTAAAACGGGTAAAGTTCACCGCCGAAAATTGGGCGGTGAATAACCGCGTTTGAAAGATTGTGACATATGTTGTGTCAAAATGGGCAACTTCTCCAATGATCTGAAGTTGAAACGTGATAGCCGGCAAACAAAGTGTCACTGAATTATTTTACaatacataaagggcgcttagatgccctgtacacggcgaggctctcccccc < 2:344851‑M1/295‑51 (MQ=255) cTTCGCCCGTCTGTTTCACATCGACGCTTCCCGCCTTCAATCCATCCGTTGAATGAGTTTTTTTAAAGCTCGTAATTAATGGCTAAAACGAGTAAAGTTCACCGCCGAAAATTGGGCGGTGAATAACCGCGTTTGAAATATTGTGACATATGTTTTGTCAAAATGTGCAACTTCTCCAATGATCTGAAGTTGAAACGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTACaataaataaagggcgcttagatgccctgtacacggcgaggctctccccccttgccacgcgtga < 1:38846‑M1/298‑64 (MQ=255) gccgccggctGCTTTACATCGACGCATCCCGCCTTCAAACACTCCGTGTAATGAGTTTTTGTAAAGATCGGAATTAATGGCAAAAACGAGTAAAGTGCACCGGCGGAAAGTGGGCGGTGAATAACCGCGTTTGAAATATTGTGACAGATGGTTTGTCAAAATGTGCAACTTCTCCAATGATCTGAAGTTGAAACGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTACaataaataaagggcgcttagatgccctgtacacggcgaggcgctccccccttgccacgcgtgaga < 2:421190‑M1/294‑66 (MQ=255) tCTGTTTCACATCGACGCTTCCCGCCTTCAATCCATCCGTTGAATGAGTTTTTTTAAAGCTCGTAATTAATGGCTAAAACGAGTAAAGTTCACCGCCGAAAATTGGGCGGTGAATAACCGCGTTTGAAATATTGTGACATATGTTTTGTCAAAATGTGCAACTTCTCCAATGATCTGAAGTTGAAACGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTACaataaataaagggcgcttagatgccctgtacacggcgaggctctccccccttgccacgcgtgagaacgtaaa < 1:188905‑M1/298‑73 (MQ=255) acaTCGACGCTTCCCGCCTTCAATCCATCCGTTGAATGAGTTTTTTTAAAGCTCGTAATTAATGGCTAAAACGAGTAAAGTTCACCGCCGAAAATTGGGCGGTGAATAACCGCGTTTGAAATATTGTGACATATGTTTTGTCAAAATGTGCAACTTCTCCAATGATCTGAAGTTGAAACGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTACaataaataaagggcgcttagatgccctgtacacggcgaggctctccccccttgccacgcgtgagaacgtaaaaaaagcac < 1:376576‑M1/298‑81 (MQ=255) ttCAATCCTTGCGTGGGAGGAGTTTTTTGCAAGCGCGTGATTAATGGGTAAAACGAGGAAAGTTGACCGCCGAAAGTTGGGCGGTGAATAACCGGGTTTGAAAGGTTGGGACATATGTTTTGTCAGAATGTGCAACTTCTCCAATGATCTGAAGGTGAAACGTGATAGCCGGCAAACAAGTTGGCACTGAATTATTTTACaataaataaagggcgcgtagatgacctgtacacggcgaggctctccccccttgccacgcgtgagaacgtaaaaaaagcacccatactcaggagcactc < 2:28953‑M1/298‑99 (MQ=255) gAATGAGTTTTTTTAAAGCTCGTAATTAATGGCTAAAACGAGTAAAGTTCACCGCCGAAAATTGGGCGGTGAATAACCGCGTTTGAAATATTGTGACATATGTTTTGTCAAAATGTGCAACTTCTCCAATGATCTGAAGTTGAAACGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTACaataaataaagggcgcttagatgccctgtacacggcgaggctctccccccttgccacgcgtgagaacgtaaaaaaagcacccatactcaggagcactctcaattatgtttaag > 1:30563‑M1/1‑185 (MQ=255) tgtgtttTTTTAAACGTCGTAATTAGTGGCTAAAACGAGTAAAGTTCACCGCCGAAAATTGGGCGGTGAATAACCGCTGTTGAAATATTGTGACATATGTTTTGTCAAAATGTGCAACTTCTCCAATGATCTGAAGTTGAAACGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTACaataaataaagggcgcttagatgccctgtacacggcgaggctctccccccttgccacgcgtgagaacgtaaaaaaagcacccatactcaggagcactctcaattatgtttaagaat < 2:57832‑M1/295‑117 (MQ=255) tAAAGTTCAACTCAGAAAATTGGGCGGTAAATAACCTCGTTTGAAATTGTGTGATCTAGTTTTTGTCAAAATTTGCAACGTCGCAGATGATCTGAAGTTGAAACGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTACaataaataaagggcgcttagatgccctgtacacggcgaggctctccccccttgccacgcgtgagaacgtaaaaaaagcacccatactcaggagcactctcaattatgtttaagaatgcatttgctaacctgcaaaaggtcggtaaatcgctgatg < 2:155497‑M1/298‑156 (MQ=255) aaaGTTCACCGCCGAAAATTTGGCGGTGAATAACCACGTTTGAAATATTGTGACATATGTTTTGTCAAAATGTGCAACTTCGCCAATGATCTGAAGTTGAAACGTGATAGTCGTGAAACAAATTGGAACTGAATTATTTTACTCTGTGTAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGTAAAAAAAGCACCAATACTCAGGAGCACTCTCAATTATGTTTAAGAATTGATTGGCTAACCTGCAAAAGGTCGGTAAAtgg > 1:133266/1‑296 (MQ=255) aaGTTCACCGCCGAAAATTGGGCGGTGAATAACCGCGTTTGAAATATTGTGACATATGTTTTGTCAAAATGTGCAACTTCTCCAATGATCTGAAGTTGAAACGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTACaataaataaagggcgcttagatgccctgtacacggcgaggctctccccccttgccacgcgtgagaacgtaaaaaaagcacccatactcaggagcactctcaattatgtttaagaatgcatttgctaacctgcaaaaggtcggtaaatcgctgatgct > 2:75784‑M1/1‑141 (MQ=255) aGTTCACCGCCGAAAATTGGGCGGTGAATAACCGCGTTTGAAATATTGTGACATATGTTTTGTCAAAATGTGCAACTTCTCCAATGATCTGAAGTTGAAACGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTACaataaataaagggcgcttagatgccctgtacacggcgaggctctccccccttgccacgcgtaagaccgtaaaaaaagcacccatacacaggagcactcccaattatgtttacgaatgcatttgctaaccttcaaaaggtcggtaaatcgctgacgctg > 2:189947‑M1/1‑140 (MQ=255) aaTTGGGCGGTGAATAACCGCGTTTGAAATATTGTGACATATGTTTTGTCAAAATGTGCAACTTCTCCAATGATCTGAAGTTGAAACGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTACaataaataaatggcgcttagatgccctgtacacggcgaggctctccccccttgccacgcgtgagaacgtaaaaaaagcacccatactcaggagcactctcaattatgtttaagaatgcatttgctaacctgcaaaaggtcggtaaatcgcggatgctgccggtatccgtact > 1:347715‑M1/1‑126 (MQ=255) gcgcTGAATAACCGCGTCTGAAATATTGTGACATATGTTTCGTCAAAATGTGCAACTTCTCCAATGATCTGAAGTTGAAACGTGATAGCCGTCAAACCAATTGGCACTGAATTATTTTCCaagaaataaagcgcgcttagatgcactgtacacggcaaggctctccccccttgccacgcgtgagcacgtaacaacagaacccatactcaggagcactctcaattatgcttcagaaagcctttgctaccctgcaaacggtcagtaactcgctgctgctgccgatatctgtactacatat > 2:130207‑M1/1‑120 (MQ=255) ccGCGTTTGAAATATTTTGACATATGTTTTGTCAAAATGTGCAACTTCTCCAATGATCTGCAGTTGAAACGTGATAGCCGTCACACAGATTGGCACTGAATTATTTTACaataaataaagggcgcttaggtgccctgtacacggcgaggctctccccccttgccacgcgtgagaacggaaaacaagaacccctactccggcgccctcgcacttatgtttaagcatgcatttcctaacctgcaaaaggtcgttaaatcgctgattctgacggtatccgtcctgcctacctcaggtatcc > 2:234421‑M1/1‑109 (MQ=255) cgcgTTTGAAATATTGTGACATATGTTTTGTCAAAATGTGCAACTTCTCCAATGATCTGAAGTTGAAACGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTACaataaataaagggcgcttagatgccctgtacacggcgaggctctccccccttgccacgcgtgagaacgtaaaaaaagcacccatactcaggagcactctcaattatgtttaagaatgcatttgctaacctgcaaaaggtcggtaaatcgctgatgctgccggtatccgtactgcctatcgcaggtatcct > 2:188488‑M1/1‑108 (MQ=255) tGTTTTGTCAAAATGTGCAACTTCTCCAATGATCTGAAGTTGAAACGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTACaataaataaagggcgcttagatgccctgtacacggcgaggctctccccccttgccacgcgtgagaacgtaaaaaaagcacccatactcaggagcactctcaattatgtttaagaatgcatttgctaacctgcaaaaggtcggtaaatcgctgatgctgccggtatccgtactgcctatcgcaggtatcctgctgggcgtcggttccgcgaatt < 1:351839‑M1/298‑214 (MQ=255) aaTGTGCAACTTCTCCAATGATCTGAAGTTGAAACGTGATAGCCGTCAAACAAATTGGCACTGAATTATGTTACaataaataaagggcgcttagatgccctgtacacggcgaggctctccccccttgccacgcctgagaacgtaaaaaaagcacccatacccagtagcactcccaattatgtttaagaatgcatttgctaacctgcaaaaggtcggtaaatcgcttatgctgccggtatccgtactgcccatcccacgtatcctgccgggcgtctgttcctcgaatttcagccggctt > 2:408287‑M1/1‑74 (MQ=255) aattttccaataTTCTAAAGTTGAAACGGTATAGACGTAAAAAAAATTGGGCCTGAATTAATTTAGaataaataaaggggctttggaggccctgaacacggcgaggctctccccccttgccacgcgtgagaacgtaaaaaaagcacccatactcaggagcactctcaattatgtttaagaatgcatttgctaacctgcaaaaggtcggtaaatcgctgatgctgccggtatccgtactgcctatcgcaggtatcctgctgggcgtcggttccgcgaatttcagctggctgcccgccgt < 2:271764‑M1/293‑233 (MQ=255) cAATGATCTGAAGTTGAAACGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTACaataaataaagggcgcttagatgccctgtacacggcgaggctctccccccttgccacgcgtgagaacgtaaaaaaagcacccatactcaggagcactctcaattatgtttaagaatgcatttgctaacctgcaaaaggtcggtaaatcgctgatgctgccggtatccgtactgcctatcgcaggtatcctgctgggcgtcggttccgcgaatttcagctggctgcccgccgttgtatcg > 1:146856‑M1/1‑59 (MQ=255) gATCTGAAGTTGAAACGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTACaataaataaagggcgcttagatgccctgtacacggcgaggctctccccccttgccacgcgtgagaacgtaaaaaaagcacccatactcaggagcactctcaattatgtttaagaatgcatttgctaacctgcaaaaggtcggtaaatcgctgatgctgccggtatccgtactgcctatcgcaggtatcctgctgggcgtcggttccgcgaatttcggctggctgcccgccgttgtatcgcatg > 1:96992‑M1/1‑55 (MQ=255) tGATAGCCGTCAAACAAATTGGCACTGAATTATTTTACaataaataaagggcgcttagatgccctgtacacggcgaggctctccccccttgccacgcgtgagaacgtaaaaaaagcacccatactcatgagcactctcaattatgtttaagaatgcatttgctaacctgcaaaaggtcggtaaatcgctgatgctgccggtatccgtactgcctatcgcaggtctcctgctgggcgtcggttccgcgaatttcagctggctgcccgccgttgtatcgcctggtaaggcagaagcaggc > 2:367830‑M1/1‑38 (MQ=255) aaacaaaTTGGCACTGAATTATTTTACaataaataaagggcgcttagatgccctgtacacggcgaggctctccccccttgccacgcgtgagaacgtaaaaaaagcacccatactcaggagcactctcaattatgtttaagaatgcatttgctaacctgcaaaaggtcggtaaatcgctgatgctgccggtatccgtactgcctatcgcaggtatcctgctgggcgtcggttccgcgaatttcagctggctgcccgccgttgtatcgcatgttatggcagaagcaggcggttccgtctt < 1:36398‑M1/298‑272 (MQ=255) aacaaaTTGGCACTGAATTATTTTACaataaataaagggcgcttagatgccctgtacacggcgaggctctccccccttgccacgcgtgagaacgtaaaaaaagcacccatactcaggagcactctcaattatgtttaagaatgcatttgctaacctgcaaaaggtcggtaaatcgctgatgctgccggtatccgtactgcctatcgcaggtatcctgctgggcgtcggttccgcgaatttcagctggctgcccgccgttgtatcgcatgttatggcagaagcaggcggttccgtcttt < 1:75784‑M1/298‑273 (MQ=255) tGAATTATTTTACaataaataaagggcgcttagatgccctgtacacggcgaggctctccccccttgccacgcgtgagaacgtaaaaaaagcacccatactcaggagcactctcaattatgtttaagaatgcatttgctaacctgcaaaaggtcggtaaatcgctgatgctgccggtatccgtactgcctatcgcaggtatcctgctgggcgtcggttccgcgaatttcagctggctgcccgccgttgtatcgcatgttatggcagaagcaggcggttccgtctttgcaaacatgccac > 1:169890‑M1/1‑13 (MQ=255) aaTTATTTTACaataaataaagggcgcttagatgccctgtacacggcgaggctctccccccttgccacgcgtgagaacgtaaaaaaagcacccatactcaggagcactctcaattatgtttaagaatgcatttgctaacctgcaaaaggtcggtaaatcgctgatgctgccggtatccgtactgcctatcgcaggtctcctgctgggcgtcggttccgcgaatttcagctggctgcccgccgttgtatcgcatgttatggcagaagcaggcggttccgtctttgcaaacatgccactg > 1:94621‑M1/1‑11 (MQ=255) | AAGGTGTTGCCGTTGAAGAACTGGCGCAGGTAACCACCGATAACTTCGCCCGTCTGTTTCACATCGACGCTTCCCGCCTTCAATCCATCCGTTGAATGAGTTTTTTTAAAGCTCGTAATTAATGGCTAAAACGAGTAAAGTTCACCGCCGAAAATTGGGCGGTGAATAACCGCGTTTGAAATATTGTGACATATGTTTTGTCAAAATGTGCAACTTCTCCAATGATCTGAAGTTGAAACGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTACTCTGTGTAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGTAAAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATCCTGCTGGGCGTCGGTTCCGCGAATTTCAGCTGGCTGCCCGCCGTTGTATCGCATGTTATGGCAGAAGCAGGCGGTTCCGTCTTTGCAAACAT > CP006584/1213207‑1213771 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |