| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | CP006584 | 1,213,485 | Δ7 bp | intergenic (+184/‑105) | LY180_05705 → / → LY180_05710 | DNAse/PTS glucose transporter subunit IIBC |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP006584 | = 1213484 | 1 (0.020) | 29 (0.700) | 29/586 | 0.5 | 96.7% | intergenic (+183/‑112) | LY180_05705/LY180_05710 | DNAse/PTS glucose transporter subunit IIBC |
| ? | CP006584 | 1213492 = | 1 (0.020) | intergenic (+191/‑104) | LY180_05705/LY180_05710 | DNAse/PTS glucose transporter subunit IIBC | |||||
TGCCGTTGAAGAACTGGCGCAGGTAACCACCGATAACTTCGCCCGTCTGTTTCACATCGACGCTTCCCGCCTTCAATCCATCCGTTGAATGAGTTTTTTTAAAGCTCGTAATTAATGGCTAAAACGAGTAAAGTTCACCGCCGAAAATTGGGCGGTGAATAACCGCGTTTGAAATATTGTGACATATGTTTTGTCAAAATGTGCAACTTCTCCAATGATCTGAAGTTGAAACGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTACTCTGTGTAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGTAAAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATCCTGCTGGGCGTCGGTTCCGCGAATTTCAGCTGGCTGCCCGCCGTTGTATCGCATGTTATGGCAGAAGCAGGCGGTTCCGTCTTTGCAAACATGCCACTG > CP006584/1213214‑1213778 | aaggtgttgccgttgaagaactggcgcaggtaaccaccgataacttcgcccgtctgtttcacatcgacgcttcccgccttcaatccatccgttgaatgagtttttttaaagctcgtaattaatggctaaaacgagtaaagttcaccgccgaaaattgggcggtgaataaccgcgtttgaaatattgtgacatatgttttgtcaaaatgtgcaacttctccaatgatctgaagttgaaacgtgatagccgtcaaacaaattggcactgaattattttacAATAAATAAAGGGCGCTTAg < 1:95842‑M2/20‑1 (MQ=255) ccgttgaagaactggcgcaggtaaccaccgataacttcgcccgtctgtttcacatcgacgcttcccgccttcaatccatccgttgaatgagtttttttaaagctcgtaattaatggctaaaacgatgaaagttcaccgccgaaaattgggcggtgaataaccgcgtttgaaatattgtgacctatgttttgtcaaaatgtgcaacttctccaatgagctgaagttgaaacgtcatcgccgcccaacaaattggccccgaattcttttacAATAACAAAAGGGCGCTTAGATGCACTGt > 2:36398‑M2/270‑298 (MQ=255) gaactggcgcaggtaaccaccgataacttcgcccgtctgtttcacatcgacgcttcccgccttcaatccatccgttgaatgagtttttttaaagctcgtaattaatggctaaaacgagtaaagttcaccgccgaaaattgggcggtgaataaccgcgtttgaaatattgtgacatatgttttgtcaaaatgtgcaacttctccaatgatctgaagttgaaacgtgatagccgtcaaacaaattggcactgaattattttacAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCg > 1:271764‑M2/262‑298 (MQ=255) tggcgcaggtaaccaccgataacttcgcccgtctgtttcacatcgacgcttcccgccttcaatccatccgttgaatgagtttttttaaagctcgtaattaatggctaaaacgagtaaagttcaccgccgaaaattgggcggtgaataaccgcgtttgaaatattgtgacatatgttttgtcaaaatgtgcaacttctccaatgatctgaagttgaaacgtgatagccgtcaaacaaattggcactgaattattttacAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGc < 1:407638‑M2/41‑1 (MQ=255) tatccaccgggaagttcgcccgtagttttgacatggacggcgccctccttcaatccatccgttgaatgagtttttttaaagctcgtaattaatggctaaaacgggtaaagttcaccgccgaaaattgggcggtgaataaccgcgtttgaaagattgtgacatatgttgtgtcaaaatgggcaacttctccaatgatctgaagttgaaacgtgatagccggcaaacaaagtgtcactgaattattttacAATACATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTcccccc < 2:344851‑M2/50‑1 (MQ=255) cttcgcccgtctgtttcacatcgacgcttcccgccttcaatccatccgttgaatgagtttttttaaagctcgtaattaatggctaaaacgagtaaagttcaccgccgaaaattgggcggtgaataaccgcgtttgaaatattgtgacatatgttttgtcaaaatgtgcaacttctccaatgatctgaagttgaaacgtgatagccgtcaaacaaattggcactgaattattttacAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTga < 1:38846‑M2/63‑1 (MQ=255) gccgccggctgctttacatcgacgcatcccgccttcaaacactccgtgtaatgagtttttgtaaagatcggaattaatggcaaaaacgagtaaagtgcaccggcggaaagtgggcggtgaataaccgcgtttgaaatattgtgacagatggtttgtcaaaatgtgcaacttctccaatgatctgaagttgaaacgtgatagccgtcaaacaaattggcactgaattattttacAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCGCTCCCCCCTTGCCACGCGTgaga < 2:421190‑M2/65‑1 (MQ=255) tctgtttcacatcgacgcttcccgccttcaatccatccgttgaatgagtttttttaaagctcgtaattaatggctaaaacgagtaaagttcaccgccgaaaattgggcggtgaataaccgcgtttgaaatattgtgacatatgttttgtcaaaatgtgcaacttctccaatgatctgaagttgaaacgtgatagccgtcaaacaaattggcactgaattattttacAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGTaaa < 1:188905‑M2/72‑1 (MQ=255) acatcgacgcttcccgccttcaatccatccgttgaatgagtttttttaaagctcgtaattaatggctaaaacgagtaaagttcaccgccgaaaattgggcggtgaataaccgcgtttgaaatattgtgacatatgttttgtcaaaatgtgcaacttctccaatgatctgaagttgaaacgtgatagccgtcaaacaaattggcactgaattattttacAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGTAAAAAAAGCAc < 1:376576‑M2/80‑1 (MQ=255) ttcaatccttgcgtgggaggagttttttgcaagcgcgtgattaatgggtaaaacgaggaaagttgaccgccgaaagttgggcggtgaataaccgggtttgaaaggttgggacatatgttttgtcagaatgtgcaacttctccaatgatctgaaggtgaaacgtgatagccggcaaacaagttggcactgaattattttacAATAAATAAAGGGCGCGTAGATGACCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGTAAAAAAAGCACCCATACTCAGGAGCActc < 2:28953‑M2/98‑1 (MQ=255) gaatgagtttttttaaagctcgtaattaatggctaaaacgagtaaagttcaccgccgaaaattgggcggtgaataaccgcgtttgaaatattgtgacatatgttttgtcaaaatgtgcaacttctccaatgatctgaagttgaaacgtgatagccgtcaaacaaattggcactgaattattttacAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGTAAAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAg > 1:30563‑M2/186‑298 (MQ=255) tgtgtttttttaaacgtcgtaattagtggctaaaacgagtaaagttcaccgccgaaaattgggcggtgaataaccgctgttgaaatattgtgacatatgttttgtcaaaatgtgcaacttctccaatgatctgaagttgaaacgtgatagccgtcaaacaaattggcactgaattattttacAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGTAAAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAAt < 2:57832‑M2/116‑1 (MQ=255) aaaGTTCACCGCCGAAAATTTGGCGGTGAATAACCACGTTTGAAATATTGTGACATATGTTTTGTCAAAATGTGCAACTTCGCCAATGATCTGAAGTTGAAACGTGATAGTCGTGAAACAAATTGGAACTGAATTATTTTACTCTGTGTAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGTAAAAAAAGCACCAATACTCAGGAGCACTCTCAATTATGTTTAAGAATTGATTGGCTAACCTGCAAAAGGTCGGTAAAtgg > 1:133266/1‑296 (MQ=255) taaagttcaactcagaaaattgggcggtaaataacctcgtttgaaattgtgtgatctagtttttgtcaaaatttgcaacgtcgcagatgatctgaagttgaaacgtgatagccgtcaaacaaattggcactgaattattttacAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGTAAAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGAtg < 2:155497‑M2/155‑1 (MQ=255) aagttcaccgccgaaaattgggcggtgaataaccgcgtttgaaatattgtgacatatgttttgtcaaaatgtgcaacttctccaatgatctgaagttgaaacgtgatagccgtcaaacaaattggcactgaattattttacAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGTAAAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGAtgct > 2:75784‑M2/142‑298 (MQ=255) agttcaccgccgaaaattgggcggtgaataaccgcgtttgaaatattgtgacatatgttttgtcaaaatgtgcaacttctccaatgatctgaagttgaaacgtgatagccgtcaaacaaattggcactgaattattttacAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTAAGACCGTAAAAAAAGCACCCATACACAGGAGCACTCCCAATTATGTTTACGAATGCATTTGCTAACCTTCAAAAGGTCGGTAAATCGCTGAcgctg > 2:189947‑M2/141‑298 (MQ=255) aattgggcggtgaataaccgcgtttgaaatattgtgacatatgttttgtcaaaatgtgcaacttctccaatgatctgaagttgaaacgtgatagccgtcaaacaaattggcactgaattattttacAATAAATAAATGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGTAAAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCGGATGCTGCCGGTATCCGTACt > 1:347715‑M2/127‑298 (MQ=255) gcgctgaataaccgcgtctgaaatattgtgacatatgtttcgtcaaaatgtgcaacttctccaatgatctgaagttgaaacgtgatagccgtcaaaccaattggcactgaattattttccAAGAAATAAAGCGCGCTTAGATGCACTGTACACGGCAAGGCTCTCCCCCCTTGCCACGCGTGAGCACGTAACAACAGAACCCATACTCAGGAGCACTCTCAATTATGCTTCAGAAAGCCTTTGCTACCCTGCAAACGGTCAGTAACTCGCTGCTGCTGCCGATATCTGTACTACatat > 2:130207‑M2/121‑298 (MQ=255) ccgcgtttgaaatattttgacatatgttttgtcaaaatgtgcaacttctccaatgatctgcagttgaaacgtgatagccgtcacacagattggcactgaattattttacAATAAATAAAGGGCGCTTAGGTGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGGAAAACAAGAACCCCTACTCCGGCGCCCTCGCACTTATGTTTAAGCATGCATTTCCTAACCTGCAAAAGGTCGTTAAATCGCTGATTCTGACGGTATCCGTCCTGCCTACCTCAGGTATcc > 2:234421‑M2/110‑298 (MQ=255) cgcgtttgaaatattgtgacatatgttttgtcaaaatgtgcaacttctccaatgatctgaagttgaaacgtgatagccgtcaaacaaattggcactgaattattttacAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGTAAAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATCct > 2:188488‑M2/109‑298 (MQ=255) tgttttgtcaaaatgtgcaacttctccaatgatctgaagttgaaacgtgatagccgtcaaacaaattggcactgaattattttacAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGTAAAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATCCTGCTGGGCGTCGGTTCCGCGAAtt < 1:351839‑M2/213‑1 (MQ=255) aatgtgcaacttctccaatgatctgaagttgaaacgtgatagccgtcaaacaaattggcactgaattatgttacAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCCTGAGAACGTAAAAAAAGCACCCATACCCAGTAGCACTCCCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTTATGCTGCCGGTATCCGTACTGCCCATCCCACGTATCCTGCCGGGCGTCTGTTCCTCGAATTTCagccggctt > 2:408287‑M2/75‑297 (MQ=255) aattttccaatattctaaagttgaaacggtatagacgtaaaaaaaattgggcctgaattaatttagAATAAATAAAGGGGCTTTGGAGGCCCTGAACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGTAAAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATCCTGCTGGGCGTCGGTTCCGCGAATTTCAGCTGGCTGCCCGCCGt < 2:271764‑M2/232‑1 (MQ=255) caatgatctgaagttgaaacgtgatagccgtcaaacaaattggcactgaattattttacAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGTAAAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATCCTGCTGGGCGTCGGTTCCGCGAATTTCAGCTGGCTGCCCGCCGTTGTATCg > 1:146856‑M2/60‑298 (MQ=255) gatctgaagttgaaacgtgatagccgtcaaacaaattggcactgaattattttacAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGTAAAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATCCTGCTGGGCGTCGGTTCCGCGAATTTCGGCTGGCTGCCCGCCGTTGTATCGCATg > 1:96992‑M2/56‑298 (MQ=255) tgatagccgtcaaacaaattggcactgaattattttacAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGTAAAAAAAGCACCCATACTCATGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTCTCCTGCTGGGCGTCGGTTCCGCGAATTTCAGCTGGCTGCCCGCCGTTGTATCGCCTGGTAAGGCAGAAGCAGGc > 2:367830‑M2/39‑298 (MQ=255) aaacaaattggcactgaattattttacAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGTAAAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATCCTGCTGGGCGTCGGTTCCGCGAATTTCAGCTGGCTGCCCGCCGTTGTATCGCATGTTATGGCAGAAGCAGGCGGTTCCGTCtt < 1:36398‑M2/271‑1 (MQ=255) aacaaattggcactgaattattttacAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGTAAAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATCCTGCTGGGCGTCGGTTCCGCGAATTTCAGCTGGCTGCCCGCCGTTGTATCGCATGTTATGGCAGAAGCAGGCGGTTCCGTCttt < 1:75784‑M2/272‑1 (MQ=255) tgaattattttacAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGTAAAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATCCTGCTGGGCGTCGGTTCCGCGAATTTCAGCTGGCTGCCCGCCGTTGTATCGCATGTTATGGCAGAAGCAGGCGGTTCCGTCTTTGCAAACATGCCAc > 1:169890‑M2/14‑298 (MQ=255) aattattttacAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGTAAAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTCTCCTGCTGGGCGTCGGTTCCGCGAATTTCAGCTGGCTGCCCGCCGTTGTATCGCATGTTATGGCAGAAGCAGGCGGTTCCGTCTTTGCAAACATGCCACTg > 1:94621‑M2/12‑298 (MQ=255) | TGCCGTTGAAGAACTGGCGCAGGTAACCACCGATAACTTCGCCCGTCTGTTTCACATCGACGCTTCCCGCCTTCAATCCATCCGTTGAATGAGTTTTTTTAAAGCTCGTAATTAATGGCTAAAACGAGTAAAGTTCACCGCCGAAAATTGGGCGGTGAATAACCGCGTTTGAAATATTGTGACATATGTTTTGTCAAAATGTGCAACTTCTCCAATGATCTGAAGTTGAAACGTGATAGCCGTCAAACAAATTGGCACTGAATTATTTTACTCTGTGTAATAAATAAAGGGCGCTTAGATGCCCTGTACACGGCGAGGCTCTCCCCCCTTGCCACGCGTGAGAACGTAAAAAAAGCACCCATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATCCTGCTGGGCGTCGGTTCCGCGAATTTCAGCTGGCTGCCCGCCGTTGTATCGCATGTTATGGCAGAAGCAGGCGGTTCCGTCTTTGCAAACATGCCACTG > CP006584/1213214‑1213778 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |