New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP006584	= 347397	59 (1.420)	35 (0.850)	30/584	0.5	54.4%	intergenic (+14/‑444)	LY180_01680/LY180_01685	hypothetical protein/flagellin
	?	CP006584	363805 =	0 (0.000)					intergenic (‑32/‑256)	LY180_01770/LY180_01775	outer membrane phosphoporin protein E/gamma‑glutamyl kinase

CGCTTTATTTCCGGCAAACTCCGCTTCCCAACGGCCATAGCCAGTCAGTTGATCGTTAATTTGTGTTTCGCCTTTAAAACCAAAACGGATATAACTCTGGTCGCCATCTTTACTGTCGTTATCACTCATATAATGCATGGCTTTAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTGTTATATATTTCTGCGGCCTGTACGGATGCAGATGCCACAATGCCCATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGGGAGAGCCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAAATGTGGTAATTTATTAAATCTGTAATAAAAGCGTAAACAACTGCCGCTAGGCTTGCTGATCCCGCGCAACAAAACGCCATGCTTTGCTTGCAGATGGTTGGCAACCGACGACAGTCCTGCTAAAACGTTCGTTTGATATCATTTTTCCTAAAATTGAATGGCAGAGAATCATGAGTGACAGCCAGACGCTGGTGGTA  >  CP006584/363516‑364087                                                                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                                                           cGCTTTATTTCCGGCAAACTCCGCTTCCCAACGGCCATAGCCAGTCAGTTGATCGTTAATTTGTGTTTCGCCTTTAAAACCAAAACGGATATAACTCTGGTCGCCATCTTTACTGTCGTTATCACTCATATAATGCATGGCTTTAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTGTTATATATTTCTGCGGCCTGTACGGATGCAGATGCCACAATGCCCATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGc                                                                                                                                                                                                                                                                                    >  1:36950‑M2/1‑297 (MQ=255) cGCTGTATTTTCGGAAAACTCCGCTTCCCACCGGTCATGGCCAGTCATTTGATCGTTAAGTTGTTTTTCGCCTTGACAACCAAAACGGATATAACTCTGGTCGCCATCTTTAGTGTCGTTATCACTTATATATTGCATGGCTTTAACTTTGCCATAGACATCCAGTTTATGACCGTCTTTGTTATATATTTCTGCGGCCTGTACGGATGCAGATGCCACAATGCCCATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGc                                                                                                                                                                                                                                                                                    >  2:283962‑M2/1‑297 (MQ=255)    gcagctcagagagttttgatatcatgctgctaatcgccctgatgcttcaactaacatgttggcttgcgggcgttcatgctcagaaacaaggttgggacaagcacttccaggctaacacagtcagaaatcgaaacgtactctcaacagttcgcttaggcatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtATTCAGCGGgag                                                                                                                                                                                                                                                                                 >  1:32243‑M2/287‑298 (MQ=255)       gctcagagagttttgatatcatgctgctaatcgccctgatgcttcaactaacatgttggcttgcgggcgttcatgctcagaaacaaggttgggacaagcacttccaggctaacacagtcagaaatcgaaacgtactctcaacagttcgcttaggcatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtATTCAGCGGGAGAGc                                                                                                                                                                                                                                                                              <  2:172867‑M2/15‑1 (MQ=255)       aTTTCCGGCAAACTCCGCTTCCCAACGGCCATAGCCAGTCAGTTGATCGTTAATTTGTGTTTCGCCTTTAAAACCAAAACGGATATAACTCTGGTCGCCATCTTTACTGTCGTTATCACTCATATAATGCATGGCTTTAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTGTTATATATTTCTGCGGCCTGTACGGATGCAGATGCCACAATGCCCATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGctgatga                                                                                                                                                                                                                                                                              >  1:278984‑M2/1‑291 (MQ=255)        ctcagagagttttgatatcatgctgctaatcgccctgatgcttcaactaacatgttggcttgcgggcgttcatgctcagaaacaaggttgggacaagcacttccaggctaacacagtcagaaatcgaaacgtactctcaacagttcgcttaggcatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaagttatgaggggagctctcagtATTCAGCGGGAGAGcc                                                                                                                                                                                                                                                                             >  1:301237‑M2/283‑298 (MQ=255)             agagttttgatatcatgcttgtaatctcccgtatgcttcaattaacaggttggcttgcgggagttcatgctcagaaacaaggttgggacaagcacttccaggctaaaacagtcagaaatcgaaacgtactctccacagttcgcttaggcatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtATTCAGCGGGAGAGCCCCGtt                                                                                                                                                                                                                                                                        <  2:418248‑M2/21‑1 (MQ=255)             agagttttgatatcatgctgctaatcgccctgatgcttcaactaacatgttggcttgcgggcgttcatgctcagaaacaaggttgggacaagcacttccaggctaacacagtcagaaatcgaaacgtactctcaacagttcgcttaggcatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtATTCAGCGGGAGAGCCCCGtt                                                                                                                                                                                                                                                                        <  2:79758‑M2/21‑1 (MQ=255)               agttttgatatcatgctgctaatcgccctgatgcttcaactaacatgttggcttgcgggcgttcatgctcagaaacaaggttgggacaagcacttccaggctaacacagtcagaaatcgaaacgtactctcaacagttcgcttaggcatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcacccctactcgctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctcccattATTCAGGGGGAAGGCCCCGTTGa                                                                                                                                                                                                                                                                      >  2:415294‑M2/276‑298 (MQ=255)                 aaCTCCGCTTCCCAACGGCCATAGCCAGTCAGTTGATCGTTAATTTGTGTTTCGCCTTTAAAACCAAAACGGATATAACTCTGGTCGCCATCTTTACTGTCGTTATCACTCATATAATGCATGGCTTTAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTGTTATATATTTCTGCGGCCTGTACGGATGCAGATGCCACAATGCCCATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGctgatgaatcccctaat                                                                                                                                                                                                                                                                    <  1:276644‑M2/298‑18 (MQ=255)                  aCTCCGCTTCCCAACGGCCATAGCCAGTCAGTTGATCGTTAATTTGTGTTTCGCCTTTAAAACCAAAACGGATATAACTCTGGTCGCCATCTTTACTGTCGTTATCACTCATATAATGCATGGCTTTAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTGTTATATATTTCTGCGGCCTGTACGGATGCAGATGCCACGATGCCCATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGctgatgaatcccctaatg                                                                                                                                                                                                                                                                   <  1:330517‑M2/298‑19 (MQ=255)                    tCCGCTTCCCAACGGCCATAGCCAGTCAGTTGATCGTTAATTTGTGTTTCGCCTTTAAAACCAAAACGGATATAACTCTGGTCGCCATCTTTACTGTCGTTATCACTCATATAATGCATGGCTTTAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTGTTATATATTTCTGCGGCCTGTACGGATGCAGATGCCACAATGCCCATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGctgatgaatcccctaatgat                                                                                                                                                                                                                                                                 <  1:198568‑M2/298‑21 (MQ=255)                        atcatgctgctaatcgccctgatgcttcaactaacatgttggcttgcgggcgttcatgctcagaaacaaggttgggacaagcacttccaggctaacacagtcagaaatcgaaacgtactctcaacagttcgcttaggcatggaagttttgcggcattctggctacacaataacaagggcagacttactcgtggctgcaaccctaccagcgcaaaatgtattcacacatggttccgatttggggaaattatgaggggtacgctcagtATTTATCGGGAGGGCCCCTTTGAAAAccggca                                                                                                                                                                                                                                                             >  2:384211‑M2/267‑296 (MQ=255)                         gcacggtgctaatccccctggttcttcaactatcatgtttgcgtgcgggtgttcatgctcagaaacaaaggtgggacaagcacttcgaggcgaacaccgtcagaaatcggaacgtactctcaacagttcgcttaggcatggaagttttgcggcatgctggctacacaataacaagggaagacttactcgtcgctgcaacccgacgagttcaaaacttattcacacatggttacgcggtggggaaattatgaggggatctctcagtATTCAGCGGGAGAGGCCCGTTGAAAACCGGcaa                                                                                                                                                                                                                                                            <  2:208675‑M2/33‑1 (MQ=255)                                      tAGCCAGTCAGTTGATCGTTAATTTGTGTTTCGCCTTTAAAACCAAAACGGATATAACTCTGGTCGCCATCTTTACTGTCGTTATCACTCATATAATGCATGGCTTTAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTGTTATATATTTCTGCGGCCTGTACGGATGCAGATGCCACAATGCCCATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGctgatgaatcccctaatgattttggtaaaaatcattaa                                                                                                                                                                                                                                               >  2:354652‑M2/1‑260 (MQ=255)                                            gtaagttgtcgtttaatttgtgtttgGCCTTTAAAACCAAAACGGAAATAACTCTGGTTGCCATCTTTACTGTCGTTATCACTCATATAATGCATGGCTTTAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTGTTATATATTTCTGCGGCCTGTACGGATGCAGATGCCACAATGCCCATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGctgatgaatcccctaatgattttggtaaaaatcattaagttaag                                                                                                                                                                                                                                         >  2:19688‑M2/13‑254 (MQ=255)                                            gatgcttcaactaacatgttggcttgcgggcgttcatgctcagaaacaaggttgggacaagcacttccaggctaacacagtcagaaatcgaaacgtactctcaacagttcgcttaggcatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtATTCAGCGGGAGAGCCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGt                                                                                                                                                                                                                                         >  2:185909‑M2/247‑298 (MQ=255)                                             atgcttcaactaacatgttggcttgcgggcgttcatgctcagaaacaaggttgggacaagcacttccaggctaacacagtcagaaatcgaaacgtactctcaacagttcgcttaggcatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtATTCAGCGGGAACGCCGCGTTGAAAAACGGAAAGTTTTAAACCTgggatatct                                                                                                                                                                                                                                        >  2:26661‑M2/246‑294 (MQ=255)                                                   caactaacatgttggcttgcgggcgttcatgctcagaaacaaggttgggacaagcacttccaggctaacacagtcagaaatcgaaacgtactctcaacagttcgcttaggcatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtATTCAGCGGGAGAGCCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGat                                                                                                                                                                                                                                  >  2:48435‑M2/240‑298 (MQ=255)                                                       gTTAATTTGTGTTTCGCCTTTAAAACCAAAACGGATATAACTCTGGTCGCCATCTTTACTGTCGTTATCACTCATATAATGCATGGCTTTAACTTTGCCATAGACATCCAGTTTATTACCTTCTTTGTTATATATTTCTGCGGCCTGTACGGATGCAGATGCCACAATGCCCATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGCTTTTAATTAACGCACGAATATTCAGCCtctatcaatcccctaatgattttggtcaaactccttaaattaaggttgatacaca                                                                                                                                                                                                                              <  2:323561‑M2/298‑56 (MQ=255)                                                          aaTTTGTGTTTTGCCTTTAAAACCCAAACGGATATAACTCTTGTTCCCATCTTTACTGTCGTTATCACTCATATAATGCATGGCTTTAACTTTTCCATAGACATCCAGTTTATTACCGTCTTTGTTATATATTTCTGCGGCCTGTACGGATGCAGATGCCACAATGCCCATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggatacacatct                                                                                                                                                                                                                           >  2:198568‑M2/1‑240 (MQ=255)                                                            tttGTGTTTCCCCTTTAAAACCAAAACGGATATTACTATGTTGTCCATCTTTACTTTATTTATCACTCATATAATGCATGGCTTTCACTTTGCCATAGACAGCCAGTTTCGTACTGTCTTTGTTATATATTGTTGCGGCCTTTACGGATGCAGATGCCACAATGCCCATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggatacacatcttg                                                                                                                                                                                                                         >  2:413978‑M2/1‑238 (MQ=255)                                                             ttGTGTTTCGCCTTTAAAACCAAAACGGATATAACTCTGGTCGCCATCTTTACTGTCGTTATCACTCATATAATGCATGGCTTTAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTGTTATATATTTCTGCGGCCTGTACGGATGCAGATGCCACAATGCCCATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggatacacatcttgt                                                                                                                                                                                                                        <  1:256082‑M2/298‑62 (MQ=255)                                                               tggcttgcgggcgttcatgctcagaaacaaggttgggacaagcacttccaggctaacacagtcagaaatcgaaacgtactctcaacagttcgcttaggcatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtATTCAGCGGGAGAGCCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGAtt                                                                                                                                                                                                                      <  1:185909‑M2/71‑1 (MQ=255)                                                                   ttgcgggcgttcatgctcagaaacaaggttgggacaagcacttccaggctaacacagtcagaaatcgaaacgtactctcaacagttcgcttaggcatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtATTCAGCGGGAGAGCCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATtaata                                                                                                                                                                                                                  <  1:48435‑M2/75‑1 (MQ=255)                                                                    tCGCCTTTAAAACCAAAACGGATATAACTCTGGTCGCCATCTTTACTGTCGTTATCACTCATATAATGCATGGCTTTAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTGTTATATATTTCTGCGGCCTGTACGGATGCAGATGCCACAATGCCCATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggatacacatcttgtcatatga                                                                                                                                                                                                                 >  1:204973‑M2/1‑230 (MQ=255)                                                                       ggggcttcaggctgagaaacaaggttgggacaagcacttccatgctaacacagtcagaaatcgaaacggactctcaacagttggcttagggatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtATTCAGCGGGAGAGCCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAatat                                                                                                                                                                                                              <  2:152301‑M2/79‑1 (MQ=255)                                                                        cTTTAAAACCAAAACGGATATAACTCTGGTCGCCATCTTTACTGTCGTTATCACTCATATAATGCATGGCTTTAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTGTTATATATTTCTGCGGCCTGTACGGATGCAGATGCCACAATGCCCATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggatacacatcttgtcatatgatcaa                                                                                                                                                                                                             <  1:131704‑M2/298‑73 (MQ=255)                                                                         tttAAAACCAAAACGGATATAACTCTGGTCGCCATCTTTACTGTCGTTATCACTCATATAATGCATGGCTTTAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTGTTATATATTTCTGCGGCCTGTACGGATGCAGATGCCACAATGTCCATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGctgatgaatcccctaatgattttggtaaaaatcattaagttatggtggatacacatcttgtcatatgatcaaa                                                                                                                                                                                                            >  1:42823‑M2/1‑225 (MQ=255)                                                                         gggttcaggcacagaaaacaggttgggaaaagcaattccaggctaacacaggcagaaatagaaacgtactctcaacagttcgcttaggcatggaagttttgcggcattcttgctacacaataacaagtgaagacttactcgtggctgcaaccctactagctcaaaatttattaacacatggttacgctttggggaaattatgaggggatctctcagtATTCAGCGGGAGAGACCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTc                                                                                                                                                                                                            <  2:410968‑M2/81‑1 (MQ=255)                                                                          ttAAAACCAAAACGTATATAACTTTGTTCGCCATTTTTTCTTTCGTTATCACTCAAATAATGCATGTCTTTAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTGTTATATATTTCTGCGGCCTGTACGGATGCAGATGCCACAATGCCCATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggatacacatcttgtcatatgatcaaat                                                                                                                                                                                                           >  2:256082‑M2/1‑224 (MQ=255)                                                                               aCCAAAACGGATATAACTCTGGTCGCCATCTTTACTGTCGTTATCACTCATATAATGCATGGCTTTAACTTTGCCATAGACATCCATTTTATTACCGTCTTTGTTATATATTTCTGCGGCCTGTACGGATGCAGATGCCACAATCCCCATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCCACCctgactaatcccctattgactttggtaaatataattaagttacgttgaatacacctcttttcatatgatcacatggttt                                                                                                                                                                                                      <  2:357021‑M2/298‑80 (MQ=255)                                                                                tgctcagaaacaaggttgggacaagcacttccaggctaacacagttagaaatcgaaacgtactctcaacagttcgcttaggcatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgccaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatatctcagtATTCAGCGGGAGGGCCGCGTTGAAAACAGGAAAGTTTTTAACCTGCATTTGTTAAAGGTATTTTAACAATTAATAATATTATTAACAt                                                                                                                                                                                                     >  2:332688‑M2/211‑298 (MQ=255)                                                                                tgctcagaaacaaggttgggacaagcacttccaggctaacacagtcagaaatcgaaacgtactctcaacagttcgcttaggcatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtATTCAGCGGGAGAGCCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAAAt                                                                                                                                                                                                     >  1:282222‑M2/211‑298 (MQ=255)                                                                                           ataACTCTGGTCGCCATCTTTACTGTCGTTATCACTCATATAATGCATGGCTTTAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTGTTATATATTTCTGCGGCCTGTACGGATGCAGATGCCACAATGCCCATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGctgatgaatcccctactcattttgttaaaaatccttaagtaaaagtggaaacacatcttgtcatatgatcaaatggtttatcgaaaaataa                                                                                                                                                                                          <  2:365743‑M2/298‑92 (MQ=255)                                                                                             acatctggtCGCCATCTTTACTGTCGTTATCACTCATATAATTCATGGCTTTAACTTTGCCATAGACATCCTGTTTATTACCGTCTTTGTTATATATTTCTGCGGCCTGTACGGATGCAGATGCCACAATGCCCATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggatacacatcttgtcatatgatcaaatggtttcgcgaaaaatcaat                                                                                                                                                                                        >  2:231214‑M2/4‑205 (MQ=255)                                                                                                tgggacaagcacttccaggctaacacagtcagaaatcgaaacgtactctcaacagttcgcttaggcatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtATTCAGCGGGAGAGCCCCGTTGAAAACAGGAAAGTTTTTAACATGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAAATGTGGTAATTTATTaaa                                                                                                                                                                                     <  2:286866‑M2/104‑1 (MQ=255)                                                                                                tctGGTCGCCATCTTTACTGTCGTTATCACTCATATAATGCATGGCTTTAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTGTTATATATTTCTGCGGCCTGTACGGATGCAGATGCCACAATGCCCATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggatacacatcttgtcatatgatcaaatggtttcgcgaaaaatcaataat                                                                                                                                                                                     >  1:166928‑M2/1‑202 (MQ=255)                                                                                                       gCCATCTTTACTGTCGTTATCACTCATATAATGCATGGCTTTAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTGTTATATATTTCTGCGGCCTGTACGGATGCAGATGCCACAATGCCCATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggatacacatcttgtcatatgatcaaatggtttcgcgaaaaatcaataatcagacaa                                                                                                                                                                              >  1:64578‑M2/1‑195 (MQ=255)                                                                                                       agcacttccaggctaacacagtcagaaatcgaaacgtactctcaacagttcgcttaggcatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtATTCAGCGGGAGAGCCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAAATGTGGTAATTTATTAAATCTGtaa                                                                                                                                                                              <  1:183915‑M2/111‑1 (MQ=255)                                                                                                                           gtcagaaatcgaaacgtactctcaacagttcgcttaggcatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtATTCAGCGGGAGAGCCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAAATGTGGTAATTTATTAAATCTGTAATAAAAGCGTAAACAACTGcc                                                                                                                                                          <  1:415294‑M2/131‑1 (MQ=255)                                                                                                                               ggaatcggaatggacactctacagttagcttaggcatgtgagtgttgcggcaatctggctaaacaagaacaagtgaagacttactcgtggcagcaacactactagctcaaaatttattcacacatggataggctttgtggaaattatgaggggatctctcagtATTCAGCGGGAGAGCCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAAATGTGGTAATTTATTAAATCTGTAATAAAAGCGTAAACAACGGCCGCTa                                                                                                                                                      <  2:16957‑M2/135‑1 (MQ=255)                                                                                                                                     gaaacgtactctcaacagttcgcttaggcatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtATTCAGCGGGAGAGCCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAAATGTGGTAATTTATTAAATCTGTAATAAAAGCGTAAACAACTGCCGCTAGGCTTg                                                                                                                                                <  1:368754‑M2/141‑1 (MQ=255)                                                                                                                                        cATGGCTTTAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTGTTATATATTTCTGCGGCCTGTACGGATGCAGATGCCACAATGCCCATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggatacacatcttgtcatatgatcaaatggtttcgcgaaaaatcaataatcagacaaaaagatttgagaaatcgatattttacacgactc                                                                                                                                             <  2:109003‑M2/298‑137 (MQ=255)                                                                                                                                           tactctcaacagttcgcttaggcatggaagttttgcggcattctggctacacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtATTCAGCGGGAGAGCCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAAATGTGGTAATTTATTAAATCTGTAATAAAAGCGTAAACAACTGCCGCTAGGCTTGCTGATc                                                                                                                                          <  1:154694‑M2/147‑1 (MQ=255)                                                                                                                                                        ccATAGACATCCAGTTTATTACCGTCTTTGTTATATATTTCTGCGGCCTGTACGGATGCAGATGCCACAATGCCCATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggatacacatcttgtcatatgatcaaatggtttcgcgaaaaatcaaaaatcagacaacaagatgttcgaactacatagtttaaaacactctctttaccaattctgc                                                                                                                             <  2:237504‑M2/298‑153 (MQ=255)                                                                                                                                                           tAGACATCCAGTTTATTACCGTCTTTGTTATATATTTCTGCGGCCTGTACGGATGCAGATGCCACAATGCCCATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggatacacatcttgtcatatgatcaaatggtttcgcgaaaaatcaataatcaga                                                                                                                                                                                 <  2:365471‑M2/243‑101 (MQ=255)                                                                                                                                                           tAGACATCCAGTTTATTACCGTCTTTGTTATATATTTCTGCGGCCTGTACGGATGCAGATGCCACAATGCCCATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggatacacatcttgtcatatgatcaaatggtttcgcgaaaaatcaataatcaga                                                                                                                                                                                 >  1:365471‑M2/1‑143 (MQ=255)                                                                                                                                                           tAGACATCCAGTTTATTACCGTCTTTGCTATATATTTCTGCGGCCTGTACGGATGCAGATGCCACAATGCCCATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGAGAATATTCAGCGctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggcaacacatcttgtcatttgatcacatggtttcgcgaaaaatcaataatacgacaacatgatgtacgaacccgacattttacacacatctcttttccaactcttcacc                                                                                                                          <  2:367325‑M2/298‑156 (MQ=255)                                                                                                                                                              aCATCCAGTTTATTACCGTCTTTGTTATATATTTCTGCGGCCTGTACGGATGCAGATGCCACAATGCCCATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggatacacatcttgtcatatgatcaaatggattcgcgaaaaatcaataaacagacaacaatatgtacgaaacgcaaattttaacacactccctttaccaatttctcccccaa                                                                                                                       <  2:26857‑M2/298‑159 (MQ=255)                                                                                                                                                                    aGTTTATTACCGTCTTTGTTATATATTTCTGCGGCCTGTACGGATGCAGATGCCACAATGCCCATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggatacacatcttgtcatatgatcaaatggtttcgcgaaaaatcaataatcagacaacaagatgtgcgaactcgatattttacacgactctctttaccaattctgccccgaattacac                                                                                                                 >  1:183659‑M2/1‑134 (MQ=255)                                                                                                                                                                     gTTTATTACCGTCTTTGTTATATATTTCTGCGGCCTGTACGGATGCAGATGCCACAATGCCCATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggatacacatcttgtcatatgatcaaatggtttcgcgaaaaatcaataatcagacaacaagatgtgcgaactcgatattttacacgactctctttaccaattctgccccgaattacact                                                                                                                <  1:60647‑M2/298‑166 (MQ=255)                                                                                                                                                                            tgcggcattctggctacacaataacaagggaagacttactcgtggcttcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtATTCAGCGGGAGAGCCCCGTTGAAAACAGGAAAGTTTTTAACCTGGGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAAATGTGGTAATTTATTAAATCTGTAATAAAAGCGTAAACAACTGCCGCTAGGCTTGCTGATCCCGCGCAACAAAACGCCATGCTTTGCTTGCAGa                                                                                                         <  1:40340‑M2/180‑1 (MQ=255)                                                                                                                                                                                   ttGTTATATATTTCTGCGGCCTGTACGGATGCAGATGCCACAATGCCCATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggatacacatcttgtcatatgatcaaatggtttcgcgaaaaatcaataatcagacaacaagatgtgcgaactcgatattttacacgactctctttaccaattctgccccgaattacacttaaaacgactcaac                                                                                                  >  1:109003‑M2/1‑119 (MQ=255)                                                                                                                                                                                      ttATATATTTCTGCGGCCTGTACGGATGCAGATGCCACAATGCCCATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggatacacatcttgtcatatgatcaaatggtttcgcgaaaaatcaataatcagacaacaagatgtgcgaactcgatattttacacgactctctttaccaattctgccccgaattacacttaaaacgactcaacagc                                                                                               >  2:60647‑M2/1‑116 (MQ=255)                                                                                                                                                                                           acacaataacaagggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtATTCAGCGGGAGAGCCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAAATGTGGTAATTTATTAAATCTGTAATAAAAGCGTAAACAACTGCCGCTAGGCTTGCTGATCCCGCGCAACAAAACGCCATGCTTTGCTTGCAGATGGTTGGCAACcgac                                                                                          <  1:53903‑M2/195‑1 (MQ=255)                                                                                                                                                                                                      ccTGTACGGATGCAGATGCCACAATGCCCATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggatacacatcttgtcatatgatcaaatggtttcgcgaaaaatcaataatcagacaacaagatgtgcgaactcgatattttacacgactctctttaccaattctgccccgacttccacttaaaacgactcaacagcttaacgttggcttgcc                                                                               <  2:175005‑M2/298‑199 (MQ=255)                                                                                                                                                                                                       gggaagacttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtATTCAGCGGGAGAGCCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAAATGTGGTAATTTATTAAATCTGTAATAAAAGCGTAAACAACTGCCGCTAGGCTTGCTGATCCCGCGCAACAAAACGCCATGCTTTGCTTGCAGATGGTTGGCAACCGACGACAGTCCTGCt                                                                              >  1:52290‑M2/92‑298 (MQ=255)                                                                                                                                                                                                              cttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtATTCAGCGGGAGAGCCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAAATGTGGTAATTTATTAAATCTGTAATAAAAGCGTAAACAACTGCCGCTAGGCTTGCTGATCCCGCGCAACAAAACGCCATGCTTTGCTTGCAGATGGTTGGCAACCGACGACAGTCCTGCTAAAAcgt                                                                       >  1:119008‑M2/85‑298 (MQ=255)                                                                                                                                                                                                               ttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtATTCAGCGGGAGAGCCCCGTTGAAAACAGGGAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAAATGTGGTAATTTATTAAATCTGTAATAAAAGCGTAAACAACTGCCGCTAGGCTTGCTGATCCCGCGCAACAAAACGCCATGCTTTGCTTGCAGATGGTTGGCAACCGACGACAGTCCTGCTAAAAcgtt                                                                      <  1:384211‑M2/215‑1 (MQ=255)                                                                                                                                                                                                               ttactcgtggctgcaaccctactagctcaaaatttattcacacatggttacgctttggggaaattatgaggggatctctcagtATTCAGCGGGAGAGCCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAAATGTGGTAATTTATTAAATCTGTAATAAAAGCGTAAACAACTGCCGCTAGGCTTGCTGATCCCGCGCAACAAAACGCCATGCTTTGCTTGCAGATGGTTGGCAACCGACGACAGTCCTGCTAAAAcgtt                                                                      <  1:332688‑M2/215‑1 (MQ=255)                                                                                                                                                                                                                              accatcatagcacaaaatttattcaatcagggttacgctatgtggaaatgattaggggatctatcagtATTCAGCGGGAGAGCCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAAAGGTGGTAATTTATTAAATCTGTAATAAAAGCGTAAACAACTGCCGCTAGGCTTGCTGATCCCGCGCAACAAAACGCCATGCTTTGCTTGCAGATGGTTGGCAACCGACGACAGTCCTGCTAAAACGTTCGTTTGATATCAttt                                                       <  2:282222‑M2/230‑1 (MQ=255)                                                                                                                                                                                                                               gCCCATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggatacacatcttgtcatatgatcaaatggtttcgcgaaaaatcaataatcagacaacaagatgtgcgaactcgatattttacacgactctctttaccaattctgccccgaattacacttaaaacgactcaacagcttaacgttggcttgccacgcattacttgactgtaaaactct                                                      >  1:394536‑M2/1‑75 (MQ=255)                                                                                                                                                                                                                                                   ttcacacatggttacgctttggggaaagtatgaggggatctctcagtATTCAGCGGGAGAGCCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAAATGTGGTAATTTATTAAATCTGTAATAAAAGCGTAAACAACTGCCGCTAGGCTTGCTGATCCCGCGCAACAAAACGCCATGCTTTGCTTGCAGATGGTTGGCAACCGACGACAGTCCTGCTAAAACGTTCGTTTGATATCATTTTTCCTAAAATTGAATGGCaga                                  <  1:178673‑M2/251‑1 (MQ=255)                                                                                                                                                                                                                                                         tctTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggatacacatcttgtcatatgatcaaatggtttcgcgaaaaatcaataatcagacaacaagatgtgcgaactcgatattttacacgactctctttaccaattctgccccgaattacacttaaaacgactcaacagcttaacgttggcttgccacgcattacttgactgtaaaactctcactcttaccgaacttggccgtaacc                            >  1:356306‑M2/1‑49 (MQ=255)                                                                                                                                                                                                                                                           tggttacgctttggggaaattatgaggggatctctcagtATTCAGCGGGAGAGCCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAAATGTGGTAATTTATTAAATCTGTAATAAAAGCGTAAACAACTGCCGCTAGGCTTGCTGATCCCGCGCAACAAAACGCCATGCTTTGCTTGCAGATGGTTGGCAACCGACGACAGTCCTGCTAAAACGTTCGTTTGATATCATTTTTCCTAAAATTGAATGGCAGAGAATCATg                          >  1:314786‑M2/40‑298 (MQ=255)                                                                                                                                                                                                                                                                  gctttggggaaattatgaggggatctctcagtATTCAGCGGGAGAGCCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAAATGTGGTAATTTATTAAATCTGTAATAAAAGCGTAAACAACTGCCGCTAGGCTTGCTGATCCCGCGCAACAAAACGCCATGCTTTGCTTGCAGATGGTTGGCAACCGACGACAGTCCTGCTAAAACGTTCGTTTGATATCATTTTTCCTAAAATTGAATGGCAGAGAATCATGAGTGACa                   <  1:26661‑M2/266‑1 (MQ=255)                                                                                                                                                                                                                                                                            aagtatggggggatagctgagtATGCAGCGGTAGCACCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATAGTACAGATTAATAATATTCTTAAAATGTGGTAATGTATTAAAGCTGGAATAAAAGCGTAAACAACTGCCGCTAGGCTTGCTGATCCCGCGCAACAAAACGCCATGCTTTGCTTGCATATGGTTGGCAACCGACGACAGTCCTGCTAAAACGTTCGTTTGATATCATTTTTCCTAAAATTGAATGGCAGAGAATCATGAGTGACAGCCAGACGCt         <  2:32243‑M2/276‑1 (MQ=255)                                                                                                                                                                                                                                                                                   aggggatctctcagtATTCAGCGGGAGAGCCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAAATGTGGTAATTTATTAAATCTGTAATAAAAGCGTAAACAACTGCCGCTAGGCTTGCTGATCCCGCGCAACAAAACGCCATGCTTTGCTTGCAGATGGTTGGCAACCGACGACAGTCCTGCTAAAACGTTCGTTTGATATCATTTTTCCTAAAATTGAATGGCAGAGAATCATGAGTGACAGCCAGACGCTGGTGGTa  >  1:7676‑M2/16‑298 (MQ=255)                                                                                                                                                                                                                                                                                       aaCGCGCGAATATTCAGCGctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggatacacatcttgtcatatgatcaaatggtttcgcgaaaaatcaataatcagacaacaagatgtgcgaactcgatattttacacgactctctttaccaattctgccccgaattacacttaaaacgactcaacagcttaacgttggcttgccacgcattacttgactgta                                                             >  1:297757‑M2/1‑19 (MQ=255)                                                                                                                                                                                                                                                                                       aaCGCGCGAATATTCAGCGctgatgaatcccctaatgattttggtaaaaatcattaagttaaggtggatacacatcttgtcatatgatcaaatggtttcgcgaaaaatcaataatcagacaacaagatgtgcgaactcgatattttacacgactctctttaccaattctgccccgaattacacttaaaacgactcaacagcttaacgttggcttgccacgcattacttgactgta                                                             <  2:297757‑M2/235‑217 (MQ=255)                                                                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                                                           CGCTTTATTTCCGGCAAACTCCGCTTCCCAACGGCCATAGCCAGTCAGTTGATCGTTAATTTGTGTTTCGCCTTTAAAACCAAAACGGATATAACTCTGGTCGCCATCTTTACTGTCGTTATCACTCATATAATGCATGGCTTTAACTTTGCCATAGACATCCAGTTTATTACCGTCTTTGTTATATATTTCTGCGGCCTGTACGGATGCAGATGCCACAATGCCCATCACCACTAATGCCAGAGTGCTCTTTTTCATTTTCATTCCTGATTTTAATTAACGCGCGAATATTCAGCGGGAGAGCCCCGTTGAAAACAGGAAAGTTTTTAACCTGAGATTGTTAAAGATATATTACAGATTAATAATATTCTTAAAATGTGGTAATTTATTAAATCTGTAATAAAAGCGTAAACAACTGCCGCTAGGCTTGCTGATCCCGCGCAACAAAACGCCATGCTTTGCTTGCAGATGGTTGGCAACCGACGACAGTCCTGCTAAAACGTTCGTTTGATATCATTTTTCCTAAAATTGAATGGCAGAGAATCATGAGTGACAGCCAGACGCTGGTGGTA  >  CP006584/363516‑364087

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.