| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | CP006584 | 1,749,406 | Δ777 bp | [LY180_08300]–[LY180_08310] | [LY180_08300], LY180_08305, [LY180_08310] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | CP006584 | 1749406–1750173 | 1750182 | 10–777 | 23 [0] | [0] 23 | [LY180_08300]–[LY180_08310] | [LY180_08300],LY180_08305,[LY180_08310] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP006584 | = 1749405 | 0 (0.000) | 23 (0.570) | 23/566 | 0.8 | 100% | coding (14/864 nt) | LY180_08300 | transcriptional regulator |
| ? | CP006584 | 1750183 = | 0 (0.000) | coding (370/384 nt) | LY180_08310 | gdgsA | |||||
CATAATGCGGGCGGTTGCCCGGCATCCAACGCCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGATCCAGCAATGGCGAGTCATCTTTTAACGCCAGTTCCTGCGACTCTTCCACCACCAGTTTGCTGCTCAGATCGCGCAGAGCAAGGAAAATCTCCCCGCGACTAATGCGCAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAGCTCTTGCACCAGGTGTGCTTCGAGCATCTCACGGACAATTTTAGTGATACTGGCAGGAGCCAGTTGCGCCAGACGGGAAAGATCGATACGCGAGAC > CP006584/1749900‑1750462 | tccgtggtccaatcgcgcgccccgcgtgaggcactaaccagagcctctgccatcgtccatgcggtgatagcaggctgaatataaaccggaccgccggtatgctgctccagagcctcgccgagcggcatctcttttacatcctcgtagaacggcatgcgatgtacaatgccattttccgtatcaataattcccggcagggttatggcaatcgaagttagacgctcaagttttttctggtggcggataaaaaactgatcgatatgggaaatgatacgatccagcaATGGCGAGTCATCtt < 2:396328‑M2/15‑1 (MQ=255) cgcgcgacccgcgtggtggaccaaacaaggcctctgccatcgtccatgcgctgatatcatgctgaatataaaccgggacgccggtatgctgctccagggcctcgccgagcggcatctcttttacatcctcgtagaacggcatgcgatgtacaatgccattttccgtatcaataattcccggcagggttatggcaatcgaagttagacgctcaagttttttctggtggcggataaaaaactgatcgatatgggaaatgatacgatccagcaATGGCGAGTCATCTTTTAACGCCAGTTc < 2:146417‑M2/28‑1 (MQ=255) cgcgtgagtcacccaacaaggccgctgccatcggccaggggctgatatactgctgaatataaaccggaacgccggtatgctgctccagagcctcgccgagcggcatctcttttacatcctcgtagaccggcatgcgatgtacaatgccattttccgtatcaataattcccggcagggttatggcaatcgaagttagacgctcaagttttttctggtggcggataaaaaactgatcgatatgggaaatgatacgatccagcaATGGCGAGTCATCTTTTAACGCCAGTTCCTGCGActc < 2:151101‑M2/37‑1 (MQ=255) gaggcaccaaacaaggcctctgccatcgtccatgcgctgatatcatgctgaatataaaccggaacgccggtatgctgctccagagcctcgccgagcggcatctcttttacatcctcgtagaacggcatgcgatgtacaatgccattttccgtatcaataattcccggcagggttatggcaatcgaagttagacgctcaagttttttctggtggcggatacaaaacggatcgatatgggaaatgataccatccagcaATGGCCCGGCATCTtttaccgccaattcccggagcccttgcc > 2:46450‑M2/257‑285 (MQ=255) ggcaccaaacaaggcctctgccatcgtccatgcgctgatatcatgctgaatataaaccggaacgccggtatgctgctccagagcctcgccgagcggcatctcttttacatcctcgtagaacggcatgcgatgtacaatgccattttccgtatcaataattcccggcagggttatggcaatcgaagttagacgctcaagttttttctggtggcggataaaaaactgatcgatatgggaaatgatacgatccagcaATGGCGAGTCATCTTTTAACGCCAGTTCCTGCGACTCTTccacc < 1:330075‑M2/44‑1 (MQ=255) catcgtccatgcgctgatatcatgctgaatataaaccggaacgccggtatgctgctccagagcctcgccgagcggcatctcttttacatcctcgtagaacggcatgcgatgtacaatgccattttccgtatcaataattcccggcagggttatggcaatcgaagttagacgctcaagttttttctggtggcggataaaaaactgctcgatctgggaaatgatacgatcccgcaATGGCGAGTCATCTTTTAACGCCAGTTCCTGCGACCcttcccccaccagtttccctcctaagcag > 2:345557‑M2/234‑285 (MQ=255) ggccaggcggttatatcatgctgaatataaaccggaacgccggtatgctgctccagagcctcgccgagcggcatctcttttacatcctcgtagaacggcatgcgatgtacaatgccattttccgtatcaataattcccggcagggttatggcaatcgaagttagacgctcaagttttttctggtggcggataaaaaactgatcgatatgggaaatgatacgatccagcaATGGCGAGTCATCTTTTAACGCCAGTTCCTGCGACTCTTCCACCACCAGTTTGCTGCTCAGATCGCGCa < 2:37238‑M2/69‑1 (MQ=255) tcatgctgaatataaaccggaacgccggtatgctgctccagagcctcgccgagcggcatctcttttacatcctcgtagaacggcatgcgatgtacaatgccattttccgtatcaataattcccggcagggttatggcaatcgaagttagacgctcaagttttttctggtggcggataaaaaactgatcgatatgggaaatgatacgatccagcaATGGCGAGTCATCTTTTAACGCCAGTTCCTGCGACTATTCCACCACCAGTTTGCTGCTCAGATCGCGCAGAGCAAGGAAAAact > 1:44435‑M2/215‑298 (MQ=255) gccggtatgctgctccagagcctcgccgagcggcatctcttttacatcctcgtagaacggcatgcgatgtacaatgccattttccgtatcaataattcccggcagggttatggcaatcgaagttagacgctcaagttttttctggtggcggataaaaaactgatcgatatgggaaatgatacgatccagcaATGGCGAGTCATCTTTTAACGCCAGTTCCTGCGACTCTTCCACCACCAGTTTGCTGCTCAGATCGCGCAGAGCAAGGAAAATCTCCCCGCGACTAATGCGCAGAGaa > 1:81653‑M2/192‑298 (MQ=255) cggtatgctgctccagagcctcgccgagcgccatctcttttacatcctcgtagaacggcacgcgatgtacaatgccattttccgtatcaataattcccggcagggttatggcaatcgaagttagacgctcaagttttttctggtggcggataaaaaactgatcgatatgggaaatgatacgatccagcaATGGCGAGTCATCTTTTAACGCCAGTTCCTGCGACTCTTCCACCACCAGTTTGCTGCTCAGATCGCGCAGAGCAAGGAAAATCTCCCCGCGACTAATGCGCAGAGAAAg < 1:254580‑M2/109‑1 (MQ=255) ccgatcttccagagcctcgccgagcggcatctcttttacatcctcgtagaacggcatgcgatgtacaatgccattttccgtatcaataattcccggcagggttatggcaatcgaagttagacgctcaagttttttctggtggcggataaaaaactgatcgatatgggaaatgatacgatccagcaATGGCGAGTCATCTTTTAACGCCAGTTCCTGCGACTCTTCCACCACCAGTTTGCTGCTCAGATCGCGCAGAGCAAGGAAAATCTCCCCGCGACTAATGCGCAGAGAAAGATAg < 1:299242‑M2/113‑1 (MQ=255) gcctcgccgagcggcatctcttttacatcctcgtagaacggcatgcgctgtacaatgcccttttccgtatcaataattcccggcagggttatggcaatcgacgtacgacgctcaagttttttctggtggcggataaaaaactgagcgagatgggaaatgatacgatccagcaATGGCGAGTAGTCTTTTACCGCCATTTCCTGCGCCGCTACCACCCCCAGTTTGCTGCTCAGATCGCGCCGAGCAAGGAAAATCCCCCCTCGACTATTGCCCACCGCCAGATACTGccaggcctgag > 2:417324‑M2/173‑293 (MQ=255) acatcctcgtagaacggcatgcgatgtacaatgccattttccgtatcaataattcccggcagggttatggcaatcgaagttagacgctcaagttttttctggtggcggataaaaaactgatcgatatgggaaatgatacgatccagcaATGGCGAGTCATCTTTTAACGCCAGTTCCTGCGACTCTTCCACCACCAGTTTGCTGCTCAGATCGCGCAGAGCAAGGAAAATCTCCCCGCGACt < 1:226577‑M2/94‑1 (MQ=255) acatcctcgtagaacggcatgcgatgtacaatgccattttccgtatcaataattcccggcagggttatggcaatcgaagttagacgctcaagttttttctggtggcggataaaaaactgatcgatatgggaaatgatacgatccagcaATGGCGAGTCATCTTTTAACGCCAGTTCCTGCGACTCTTCCACCACCAGTTTGCTGCTCAGATCGCGCAGAGCAAGGAAAATCTCCCCGCGACt > 2:226577‑M2/149‑242 (MQ=255) catcctcgtagaacggcatgcgatgtacaatgccattttccgtatcaataattcccggcagggttatggcaatcgaagttagacgctcaagttttttctggtggcggataaaaaactgatcgatatgggaaatgatacgatccagcaATGGCGAGTCATCTTTTAACGCCAGTTCCTGCGACTCTTCCACCACCAGTTTGCTGCTCAGATCGCGCAGAGCAAGGAAAATCTCCCCGCGACTAATGCGCAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCgg > 1:26204‑M2/148‑298 (MQ=255) gtagaacggcatgcgatgtacaatgccattttccgtatcaataattcccggcagggttatggcaatcgaagttagacgctcaagttttttctggtggcggataaaaaactgatcgatatgggaaatgatacgatccagcaATGGCGAGTCATCTTTTAACGCCAGTTCCTGCGACTCTTCCACCACCAGTTTGCTGCTCAGATCGCGCAGAGCAAGGAAAATCTCCCCGCGACTAATGCGCAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCa < 1:46450‑M2/158‑1 (MQ=255) atcaataattcccggcagggttatggcaatcgaagttagacgctcaagttttttctggtggcggataaaaaactgatcgatatgggaaatgatacgatccagcaATGGCGAGTCATCTTTTAACGCCAGTTCCTGCGACTCTTCCACCACCAGTTTGCTGCTCAGATCGCGCAGAGCAAGGAAAATCTCCCCGCGACTAATGCGCAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAGCTCTTGCAcc > 1:159511‑M2/105‑298 (MQ=255) tcaataattcccggcagggttatggcaatcgaagttagacgctcaagttttttctggtggcggataaaaaactgatcgatatgggaaatgatacgatccagcaATGGCGAGTCATCTTTTAACGCCAGTTCCTGCGACTCTTCCACCACCAGTTTGCTGCTCAGATCGCGCAGAGCAAGGAAAATCTCCCCGCGACTAATGCGCAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAGCTCTTGCACCa > 1:307061‑M2/104‑298 (MQ=255) ataattcccggcagggttatggcaatcgaagttagacgctcaagttttttctggtggcggataaaaaactgatcgatatgggaaatgatacgatccagcaATGGCGAGTCATCTTTTAACGCCAGTTCCTGCGACTCTTCCACCACCAGTTTGCTGCTCAGATCGCGCCGAGCAAGGAAAATCTCCCCGCGACTAATGCGCAGAGAAAGATAGTGCAAGGCTCCAGTTTCCACCACCAGCCCCACCCCCGGACGGCCACGGTTCCCCGCTCCTTCTATTTCCACCTCTTGCACCcggg > 2:253209‑M2/101‑297 (MQ=255) taattcccggcagggttatggcaatcgaagttagacgctcaagttttttctggtgacggataaaaaactgatcgatatgggaaatgatacgatccagcaATGGCGAGTCATCTTTTAACGCCAGTTCCTGCGACTCTTCCACCACCAGTTTGCTGCTCAGATCGCGCAGAGCAAGGAAAATCTCCCCGCGACTAATGCGCAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAGCTCTTGCACCAGgtg > 1:191101‑M2/100‑298 (MQ=255) ttagacgctcaagttttttctggtggcggataaaaaactgatcgatatgggaaatgatacgatccagcaATGGCGAGTCATCTTTTAACGCCAGTTCCTGCGACTCTTCCACCACCAGTTTGCTGCTCAGATCGCGCAGAGCAAGGAAAATCTCCCCGCGACTAATGCGCAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAGCTCTTGCACCAGGTGTGCTTCGAGCATCTCACGGACAATTTTAGt < 1:345557‑M2/229‑1 (MQ=255) tgggaaatgatacgatccagcaATGGCGAGTCATCTTTTAACGCCAGTTCCTGCGACTCTTCCACCACCAGTTTGCTGCTCAGATCGCGCAGAGCAAGGAAAATCTCCCCGCGACTAATGCGCAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAGCTCTTGCACCAGGTGTGCTTCGAGCATCTCACGGACAATTTTATTGATACTGGCAGTAACCAGTTgcgccagacgggaaaaaaccaagtgcg > 2:185087‑M2/23‑286 (MQ=255) aaatgatacgatccagcaATGGCGAGTCATCTTTTAACGCCAGTTCCTGCGACTCTTCCACCACCAGTTTGCTGCTCAGATCGCGCAGAGCAAGGAAAATCTCCCCGCGACTAATGCGCAGAGCAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGCCCACGCTTCCCCGCTTCTTTGATTTCCAGCCCTTGCACCAGGTGTGCTTCGCGCACCCCCCGACCAATTTAAGGCATACTGCCCGCAGCCCGTTGCGCCCGACGGGAAACAACGCCACGCGAGAc > 2:76037‑M2/19‑298 (MQ=255) | CATAATGCGGGCGGTTGCCCGGCATCCAACGCCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGATCCAGCAATGGCGAGTCATCTTTTAACGCCAGTTCCTGCGACTCTTCCACCACCAGTTTGCTGCTCAGATCGCGCAGAGCAAGGAAAATCTCCCCGCGACTAATGCGCAGAGAAAGATAGTGCCAGGCTTCAGTTTCAACCACCAGCCCCACCGCCGGACGGCCACGGTTCCCCGCTTCTTTGATTTCCAGCTCTTGCACCAGGTGTGCTTCGAGCATCTCACGGACAATTTTAGTGATACTGGCAGGAGCCAGTTGCGCCAGACGGGAAAGATCGATACGCGAGAC > CP006584/1749900‑1750462 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |