Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	CP006584	1,011,041	Δ300 bp	intergenic (+21/+62)	LY180_04735 → / ← pflA	hypothetical protein/pyruvate formate lyase‑activating protein

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP006584	1011041	1011340	300	40 [0]	[0] 40	LY180_04735/pflA	hypothetical protein/pyruvate formate lyase‑activating protein

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP006584	= 1011040	0 (0.000)	39 (0.950)	38/578	0.2	100%	intergenic (+20/+362)	LY180_04735/pflA	hypothetical protein/pyruvate formate lyase‑activating protein
	?	CP006584	1011341 =	0 (0.000)					intergenic (+321/+61)	LY180_04735/pflA	hypothetical protein/pyruvate formate lyase‑activating protein

ATGGGCTGGCTTATGGAGATGGGCACAAATTACCATTCAATAAAGTTCGTTGGGTGGCGCTGGTTGGAGGAGACAAAGAATCATTTGTCCAGATGGGCTGGGAAAAAAATATAAGCGATTATTTAAAAAATATG‑TGCAGTTATCTTGGTATTGAAGATGCCGATGTCACTTTCTTGTGTAATACAGTGGTATTCGATGGGGAAGAACTTCACGCGAGCTATTATCAGTCGTTATTATCTCAGGTACGGGATATGGTAGATGCACTATAAGATGTGTTAAAAACGCTGTAATCGAATTCCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGAAATTTGCGGCCGGGGGATCAATTCCGCGCGCCCGATGAATTGATCCCGGAAGTTCCTATTCTCTAGAAAGTATAGGAACTTCGAATTGGTCGACAAGCTCCCCGATCCACTA  >  CP006584/1010752‑1011335                                                                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                                                                        atggtcgtgtttatgggaatagGAAAAAATTACCAGTCAATAAAGTTTGTTGGGTGGCTCTGGTTGGAGGAGAAAAAGAATCATTTGTCCAGATGGGCTGGGAAAAAAATATAAGCGATTATTTAAAAAATATG‑TGCAGTTATCTTGGTATTGAAGATGCCGATGTCACTTTCTTGTGTAATACAGTGGTATTCGATGGGGAAGAACTTCACGCGAGCTATTATCAGTCGTTATTATCTCAGGTACGGGATATGGTAGATGCACTATAAGATGTGTTAAAAACGCTGTAgcagaatga                                                                                                                                                                                                                                                                                                <  2:214422‑M1/288‑10 (MQ=255)               ggAGATGGGCACAAATTACCATTCAATAAAGTTCGTTGGGTGGCGCTGGTTGGAGGAGACAAAGAATCATTTGTCCAGATGGGCTGGGAAAAAAATATAAGCGATTATTTAAAAAATATG‑TGCAGTTATCTTGGTATTGAAGATGCCGATGTCACTTTCTTGTGTAATACAGTGGTATTCGATGGGGCAGAACTTCACGCGAGCTATTATCAGTCGTTATTATCTCAGGTACGGGATATGGTAGATGCACTATAAGATGTGTTCAACACGCTGTAgcagcatgaagcgcgtaagaaaa                                                                                                                                                                                                                                                                                  >  2:428346‑M1/1‑275 (MQ=255)                gagaTGGGCACAAATTACCATTCAATAAAGTTCGTTGGGTGGCGCTGGTTGGAGGAGACAAAGAATCATTTGTCCAGATGGTCTGGGAAAAAAATATAAGCGATTATTTAAAAAATATG‑TGCAGTTATCTTGGTATTGAAGATGCCGATGTCACTTTCTTGTGTAATACAGTGGTATTCGATGGGGAAGAACTTCACGCGAGCTATTATCAGTCGTTATTATCTCAGGTACGGGATATGGTAGATGCACTATAAGATGTGTTAAAAACGCTGTAgcagaatgaagcgcggaataaaaa                                                                                                                                                                                                                                                                                 <  1:85916‑M1/298‑25 (MQ=255)                               tACCATTCAATAAAGTTCGTTGGGTGGCGCTGGTTGGAGGAGACAAAGAATCATTTGTCCAGATGGGCTGGGAAAAGAATATAAGCGATTATTTAAAAAATATG‑TGCAGTTATCTTGGTATTGAAGATGCCGATGTCACTTTCTTGTGTAATACAGTGGTATTCGATGGGGCAGAACTTCACGCGAGCTATTATCAGTCGTTATTATCTCAGGTACGGGATATGGTAGATGCACTATAAGATGTGTTAAAAACGCTGTAgcagaatgaagcgcggaataaaaaagcggcaaatcaata                                                                                                                                                                                                                                                                  >  1:75041‑M1/1‑259 (MQ=255)                                     tCAATAAAGTTCGTTGGGTGGCGCTGGTTGGAGAAGACAAAGAATCATTTGTCCAGATTGGCTGGGAAAAAAATATAAGCGATTATTTAAAAAATATG‑TGCAGTTATCTTGGTATTGAAGATGCCGATGTCACTTTCTTGTGTAATACAGTGGTATTCGATGGGGAAGAACTTCACGCGAGCTATTATCAGTCGTTATTATCTCAGGTACGGGATATGGTAGATGCACTATAAGATGTGTTAAAAACGCTGTAgcagaatgaagcgcggaataaaaaagcggcaactcaataaagttg                                                                                                                                                                                                                                                            <  1:405098‑M1/298‑46 (MQ=255)                                      cAATAAAGTTCGTGGGGTGGCGCGGGTTGGAGGGAACAAAGAATCGTTTGTCCAGATGGGCTGGGAAAAAAATATAAGCGATTATTTAAAAAATATG‑TGCAGTTATCTTGGTATTGAAGATGCCGATGTCACTTTCTTGTGTAATACAGTGGTATTCGATGGGGAAGAACTTCACGCGAGCTATTATCAGTCGTTATTATCTCAGGTACGGGATATGGTAGATGCACTATAAGATGTGTTAAAAACGCTGTAgcagaatgaagcgcggaataaaaaagcggcaactcaataaagttgc                                                                                                                                                                                                                                                           <  2:311696‑M1/298‑47 (MQ=255)                                                      ggggcgCGGGGTGGAGGAGACAAAGAATCAGTGGTCCAGATGGGCTGGGAAAAAAATATAAGCGATTATTTAAAAAATATG‑TGCAGTTATCTTGGTATTGAAGATGCCGATGTCACTTTCTTGTGTAATACAGTGGTATTCGATGGGGAAGAACTTCACGCGAGCTATTATCAGTCGTTATTATCTCAGGTACGGGATATGGTAGATGCACTATAAGATGTGTTAAAAACGCTGTAgcagaatgaagcgcggaataaaaaagcggcaactcaataaagttgccgctttacggggaaat                                                                                                                                                                                                                                           <  1:92177‑M1/296‑63 (MQ=255)                                                                tggtagaggacaaagataCATTTGTCCAGATGGGCTAGAAAAAAAAAAGAAGCGATTATTTAAAAAATAGT‑TGCAGTTAGCTTGGTATTGAAGATGCCGATGTCGCTTTCTTGTGTAATACAGTGGGATTCGATGGGGAAGAACTTCACGCGAGCTATTATCAGTCGTTATTATCTCAGGTACGGGATATGGTAGATGCACTATAAGATGTGTTAAAAACGCTGTAgcagaatgaagcgcggaataaaaaagcggcaactcaataaagttgccgctttacggggaaattagaacatta                                                                                                                                                                                                                                 <  2:364321‑M1/290‑73 (MQ=255)                                                                                                  cTGGGAAAAAAATATAAGCGATTATTTAAAAAATATG‑TGCAGTTATCTTGGTATTGAAGATGCCGATGTCACTTTCTTGTGTAATACAGTGGTATTCGATGGGGAAGAACTTCACGCGAGCTATTATCAGTCGTTATTATCTCAGGTACGGGGTATGGTAGATGCACTATAAGATGTGTTAAAAACGCTGTAgcagaatgaagcgcggaataaaaaagcggcaaaccaataaagttgccgctttacggggcaattagaacattaacttatgaccgtactgcccaaaaatgcctttcac                                                                                                                                                                                               >  2:95811‑M1/1‑192 (MQ=255)                                                                                                   tGGGAAAAAAATATAAGCGATTATTTAAAAAATATG‑TGCAGTTATCTTGGTATTGAAGATGCCGATGTCACTTTCTTGTGTAATACAGTGGTATTCGATGGGGAAGAACTTCACGCGAGCTATTATCAGTCGTTATTATCTCAGGTACGGGATATGGTAGATGCACTATAAGATGTGTTAAAAACGCTGTAgcagaatgaagcgcggaataaaaaagcggcaactcaataaagttgccgctttacggggaaattagaacattaccttatgaccgtactgctcaagaatgcctttcacg                                                                                                                                                                                              >  1:67135‑M1/1‑191 (MQ=255)                                                                                                    gggAAAAAAATATAAGCGATTATTTAAAAAATATG‑TGCAGTTATCTTGGTATTGAAGATGCCGATGTCACTTTCTTGTGTAATACAGTGGTATTCGATGGGGAAGAACTTCACGCGAGCTATTATCAGTCGTTATTATCTCAGGTACGGGATATGGTAGATGCACTATAAGATGTGTTAAAAACGCTGTAgcagaatgaagcgcggaataaaaaagcggcaactcaataaagttgccgctttacggggaaattagaacattaccttatgaccgtactgctcaagaatgcctttcacgc                                                                                                                                                                                             >  1:314661‑M1/1‑190 (MQ=255)                                                                                                          aaaaTATAAGCGATTATTTAAAAAATATG‑TGCAGTTATCTTGGTATTGAAGATGCCGATGTCACTTTCTTGTGTAATACAGTGGTATTCGATGGGGAAGAACTTCACGCGAGCTATTATCAGTCGTTATTATCTCAGGTACGGGATATGGTAGATGCACTATAAGATGTGTTAAAAACGCTGTAgcagaatgaagcgcggaataaaaaagcggcaactcaataaagttgccgctttacggggaaattagaacattaccttatgaccgtactgctcaagaatgcctttcacgcgttcca                                                                                                                                                                                       >  1:368502‑M1/1‑184 (MQ=255)                                                                                                                   agcaatttgttaaaaatatgttgctgtTATCGTGGTATTTAAGATGCCGATGTCACTTTCTTTGGTAATACAGTGGTATTCGATGGTGAAGAACTGCACGCGAGCTATTATCAGTCGTTATTATCGCAGGTACGGGATATGGTAGATGCACTATAAGATGTGTTAAAAACGCTGTAgctgaatgaagcgcggaataaaaaagcggcaactcaataaagttgccgctttacggggaaattagaacattaccttatgaccgtactgctcaagaatgcctttcacgcgttccatggtctct                                                                                                                                                                               <  2:84917‑M1/287‑123 (MQ=255)                                                                                                                    cGATTATTTAAAAAATATG‑TGCAGTTATCTTGGTATTGAAGATGCCGATGTCACTTTCTTGTGTAATACAGTGGTATTCGATGGGGAAGAACTTCACGCGAGCTATTATCAGTCGTTATTATCTCAGGTACGGGATATGGTAGATGCACTATAAGATGTGTTACAAACGCTGTAgcagaatgaagcgcggaataaaaaagcggcaactcaataaagttgccgctttacggggaaattagaacattaacttatgaccgtactgctcaagaaggccattcacgcgttcacttgtcctttt                                                                                                                                                                             >  2:396246‑M1/1‑174 (MQ=255)                                                                                                                      attattTAAAAAATATG‑TGCAGTTATCTTGGTATTGAAGATGCCGATGTCACTTTCTTGTGTAATACAGTGGTATTCGATGGGGAAGAACTTCACGCGAGCTATTATCATTCGTTATTATCTCAGGTACGGGATATGGTAGATGCACTATAAGATGTGTTACAAACGCTGTAgcagaatgaagcgcggactaaaaaagcggcaactcaataaagttgccgttttacggggaaattagaacatcacctaataacgatattactcacaaatccctttcccgcctccccttgtctctatct                                                                                                                                                                           >  2:383003‑M1/1‑172 (MQ=255)                                                                                                                            tAAAAAATATG‑TGCAGTTATCTTGGTATTGAAGATGCCGATGTCACTTTCTTGTGTAATACAGTGGTATTCGATGGGGAAGAACTTCACGCGAGCTATTATCAGTCGTTATTATCTCAGGTACGGGATATGGTAGATGCACTATAAGATGTGTTAAAAACGCTGTAgcagaatgaagcgcggaataaaaaagcggcaactcaataaagttgccgctttacggggaaattagaacattaccttatgaccgtactgctcaagaatgcctttcacgcgttccatggtctctttcttcggtg                                                                                                                                                                     >  1:78954‑M1/1‑166 (MQ=255)                                                                                                                                aaaTATG‑TGCAGTTATCTTGGTATTGAAGATGCCGATGTCACTTTCTTGTGTAATACAGTGGTATTCGATGGGGAAGAACTTCACGCGAGCTATTATCAGTCGTTATTATCTCAGGTACGGGATATGGTAGATGCACTATAAGATGTGTTAAAACCGCTGTAgcagaatgaagcgcggaataaaaaagcggcaactcaataaagttgccgctttacggggaaattagaacattaccttatgaccgtactgctcaagaacgcacctcacgcgttccatggcacttttctttggtggttt                                                                                                                                                                 >  2:382997‑M1/1‑162 (MQ=255)                                                                                                                                    atG‑TGCAGTTATCTTGGTATTGAAGATGCCGATGTCACTTTCTTGTGTAATACAGTGGTATTCGATGGGGAAGAACTTCACGCGAGCTATTATCAGTCGTTATTATCTCAGGTACGGGATATGGTAGATGCACTATAAGATGTGTTAAAAACGCTGTAgcagaatgaagcgcggaataaaaaagcggcaactcaataaagttgccgctttacggggaaattagaacattaccttatgaccgtactgctcaagaatgcctttcacgcgttccatggtctctttcttcggtggtctaaca                                                                                                                                                             <  1:397869‑M1/298‑141 (MQ=255)                                                                                                                                         gCAGTTATCTTGGTATTGAAGATGCCGATGTCACTTTCTTGTGTAATACAGTGGTATTCGATGGGGAAGAACTTCACGCGAGCTATTATCAGTCGTTATTATCTCAGGTACGGGATATGGTAGATGCACTATAAGATGTGTTAAAAACGCTGTAgcagaatgaagcgcggaataaaaaagcggcaactcaataaagttgccgctttacggggaaattagaacattaccttatgaccgtactgctcacgaatgcctttcacgcgttccatggtctctttcttcggtggtctaacaccgt                                                                                                                                                         >  1:31888‑M1/1‑154 (MQ=255)                                                                                                                                                  ttGGTATTGAAGATGCCGATGTCACTTTCTTGTGTAATACAGTGGTATTCGATGGGGAAGAACTTCACGCGAGCTATTATCAGTCGTTATTATCTCAGGTACGGGATATGGTAGATGCACTATAAGATGTGTTAAAAACGCTGTAgcagaatgaagcgcggaataaaaaagcggcaactcaataaagttgccgctttacggggaaattagaacattaccttatgaccgtactgctcaagaatgcctttcacgcgttccatggtctctttcttcggtggtctaacaccgtcgagtttgt                                                                                                                                                >  1:200204‑M1/1‑145 (MQ=255)                                                                                                                                                          gAAGATGCCGATGTCACTTTCTTGTGTAATACAGTGGTATTCGATGGGGAAGAACTTCACGCGAGCTATTATCAGTCGTTATTATCTCAGGTACGGGATATGGTAGATGCACTATAAGATGTGTTAAAAACGCTGTAgcagaatgaagcgcggaataaaaaagcggcaactcaataaagttgccgctttacggggaaattagaacattaccttatgaccgtactgctcaagaatgcctttcacgcgttccatggtctctttcttcggtggtctaacaccgtcgagtttgtactcttca                                                                                                                                        <  1:271641‑M1/298‑162 (MQ=255)                                                                                                                                                              aTGCCGATGTCACTTTCTTGTGTAATACAGTGGTATTCGATGGGGAAGAACTTCACGCGAGCTATTATCAGTCGTTATTATCTCAGGTACGGGATATGGTAGATGCACTATAAGATGTGTTAAAAACGCTGTAgcagaatgaagcgcggaataaaaaagcggcaactcaataaagttgccgctttacggggaaattagaacattaccttataaccgtactgctcaagcatgactttcctgctttccatggtctctctcttccggtgtttaacaccgtccgagtttttattttcaccca                                                                                                                                    >  2:382890‑M1/1‑133 (MQ=255)                                                                                                                                                                             tCTTGTGTAATACAGTGGTATTCGATGGGGAAGAACTTCACGCGAGCTATTATCAGTCGTTATTATCTCAGGTACGGGATATGGTAGATGCACTATAAGATGTGTTAAAAACGCTGTAgcagaatgaagcgcggaataaaaaagcggcaactcaataaagttgccgctttacggggaaattagaacattaccttatgaccgtactgctcaagaatgcctttcacgcgttccatggtctctttcttcggtggtctaacaccgtcgagtttgtactcttcacccattgccacccatttgt                                                                                                                     <  1:97202‑M1/298‑181 (MQ=255)                                                                                                                                                                                      aTACAGTGGTATTCGATGGGGAAGAACTTCACGCGAGCTATTATCAGTCGTTATTATCTCAGGTACGGGATATGGTAGATGCACTATAAGATGTGTTAAAAACGCTGTAgcagaatgaagcgcggaataaaaaagcggcaactcaataaagttgccgctttacggggaaattagaacattaccttatgaccgtactgctcaagaatgcctttcacgcgttccatggtctctttcttcggtggtctaacaccgtcgagtttgtactcttcacccattgccacccatttgtgtttgccca                                                                                                            <  1:375724‑M1/298‑190 (MQ=255)                                                                                                                                                                                            tGGTATTCGATGGGGAAGAACTTCACGCGAGCTATTATCAGTCGTTATTATCTCAGGTACGGGATATGGTAGATGCACTATAAGATGTGTTAAAAACGCTGTAgcagaatgaagcgcggaataaaaaagcggcaactcaataaagttgccgctttacggggaaattagaacattaccttatgaccgtactgctcaagaatgcctttcacgcgttccatggtctctttcttcgatggtctaacaccgtcgagtttgtactcttcacccattgccacccctttgtttttgcccatccctc                                                                                                      >  2:119966‑M1/1‑103 (MQ=255)                                                                                                                                                                                                 tttgatgGGGAAGAACTTCACGGGAGCTTTTATCAGTCGTTATTATCTGAGGTACGGGATATGGTAGATGCACTATAAGATGTGTTAAAAACGCTGTAgcagaatgaagcgcggaataaaaaagcggcaactcaataaagttgccgctttacggggaaattagaacattaccttatgaccgtactgctcaagaatgcctttcacgcgttccatggtctctttcttcggtggtctaacaccgtcgagtttgtactcttcacccattgccacccatttgtgtttgcccagctcgtggtag                                                                                                 <  2:162190‑M1/295‑201 (MQ=255)                                                                                                                                                                                                               aCTTCACGCGAGCTATTATCAGTCGTTATTATCTCAGGTACGGGATATGGTAGATGCACTATAAGATGTGTTAAAAACGCTGTAgcagaatgaagcgcggaataaaaaagcggcaactcaataaagttgccgctttacggggaaattagaacattaccttatgaccgtactgctcaagaatgcctttcacgcgttccatggtctctttcttcggtggtctaacaccgtcgagtttgtactcttcacccattgccacccatttgtgtttgcccagctcgtggtaggggagaagctcgat                                                                                   <  1:342294‑M1/298‑215 (MQ=255)                                                                                                                                                                                                                   cACGCGAGCTATTATCAGTCGTTATTATCTCAGGTACGGGATATGGTAGATGCACTATAAGATGTGTTAAAAACGCTGTAgcagaatgaagcgcggaataaaaaagcggcaactcaataaagttgccgctttacggggaaattagaacattaccttatgaccgtactgctcaagaatgcctttcacgcgttccatggtctctttcttcggtggtctaacaccgtcgagtttgtactcttcacccattgccacccatttgtgtttgcccagctcgtggtaggggagaagctcgattttc                                                                               <  1:287790‑M1/298‑219 (MQ=255)                                                                                                                                                                                                                                       gTTATTATCTCAGGTACGGGATATGGTAGATGCACTATAAGATGTGTTAAAAACGCTGTAgcagaatgaagcgcggaataaaaaagcggcaactcaataaagttgccgctttacggggaaattagaacattaccttatgaccgtactgctcaagaatgcctctcacgcgttccatggtctctttcttcggtggtctaacaccgtcgagtttgtactcttcacccattgccacccatttgtgtttgcccagctcgtggtaggggagaagctcgattttctcaacgttgcccatatcacg                                                           <  1:382997‑M1/298‑239 (MQ=255)                                                                                                                                                                                                                                                     tACGGGATATGGTAGATGCACTATAAGATGTGTTAAAAACGCTGTAgcagaatgaagcgcggaataaaaaagcggcaactcaataaagttgccgctttacggggaaattagaacattaccttatgaccgtactgctcaagaatgcctttcacgcgttccatggtctctttcttcgatggtctaacaccgtcgagtttgtactcttcacccattgccacccatttgtgtttgcccagctcgtggtaggggagaagctcgattttctcaacgttgcccatatcacgggtaaattcaccga                                             <  1:119966‑M1/298‑253 (MQ=255)                                                                                                                                                                                                                                                        gggATATGGTAGATGCACTATAAGATGTGTTAAAAACGCTGTAgcagaatgaagcgcggaataaaaaagcggcaactcaataaagttgccgctttacggggaaattagaacattaccttatgaccgtactgctcaagaatgcctttcacgcgttccatggtctctttcttcggtggtctaacaccgtcgagtttgtaatcttcacccattgccacccatttgtctttgcccagctcttggtaggggaaaagctcgattttcccaactttccccataccccgggtaaatttccccagcg                                          >  2:135689‑M1/1‑43 (MQ=255)                                                                                                                                                                                                                                                         ggATATGGTAGATGCACTATAAGATGTGTTAAAAACGCTGTAgcagaatgaagcgcggaataaaaaagcggcaactcaataaagttgccgctttacggggaaattagaacattaccttatgaccgtactgctcaagaatgcctttcacgcgttccatggtctctttcttcggtggtctaacaccgtcgagtttgtactcttcacccattgccacccatttgtgtttgcccagctcgtggtaggggagaagctcgattttctcaacgttgcccatatcacgggtaaattcaccgaggcg                                         >  1:102136‑M1/1‑42 (MQ=255)                                                                                                                                                                                                                                                            tatGGTAGATGCACTATAAGATGTGTTAAAAACGCTGTAgcagaatgaagcgcggaataaaaaagcggcaactcaataaagttgccgctttacggggaaattagaacattaccttatgaccgtactgctcaagaatgcctttcacgcgttccatggtctctttcttcggtggtctaacaccgtcgagtttgtactcttcacccattgccacccatttgtgtttgcccagcccgtgctaggggagaagcccgattttctcaacgttgcccatatcacggctaaattccccgaggccatg                                      >  2:377971‑M1/1‑39 (MQ=255)                                                                                                                                                                                                                                                            tatGGTAGATGCACTATAAGATGTGTTAAAAACGCTGTAgcagaatgaagcgcggaataaaaaagcggcaactcaataaagttgccgctttacggggaaattagaacattaccttatgaccgtactgctcaagaatgcctttcacgcgttccatggtctctttcttcggtggtctaacaccgtcgagtctctcctcctcccccattgccacccatttgcgtttgcccagcccttggtaggggataacctcgattctcccaacgttccccatatcacggctacactcaccgcagcgctg                                      >  2:105195‑M1/1‑39 (MQ=255)                                                                                                                                                                                                                                                                         cTATAAGATGTGTTAAAAACGCTGTAgcagaatgaagcgcggaataaaaaagcggcaactcaataaagttgccgctttacggggaaattagaacattaccttatgaccgtactgctcaagaatgcctttcacgcgttccatggtctctttcttcggtggtctaacaccgtcgagtttgtactcttcacccattgccacccatttgtgtttgcccagctcgtggtaggggagaagctcgattttctcaacgttgcccatatcacgggtaaattcaccgaggcgatgcgctgaatcgtca                         <  1:382890‑M1/298‑273 (MQ=255)                                                                                                                                                                                                                                                                          tataAGATGTGTTAAAAACGCTGTAgcagaatgaagcgcggaataaaaaagcggcaactcaataaagttgccgctttacggggaaattagaacattaccttatgaccgtactgctcaagaatgcctttcacgcgttccatggtctctttcttcggtggtctaacaccgtcgagtttgtactcttcacccattgccacccatttgtgtttgcccagctcgtggtaggggagaagctcgattttctcaacgttgcccatatc                                                              >  1:124561‑M1/1‑25 (MQ=255)                                                                                                                                                                                                                                                                          tataAGATGGGTTAAAAACGCTGTAgcagaatgaagcgcggaataaaaaagcggcaactcaataaagttgccgctttacggggaaattagaacattaccttatgaccgtactgctcaagaatgcctttcacgcgttccatggtctctttcttcggtggtctaacaccgtcgagtttgtactcttcacccattgccacccatttgtgtttgcccagctcgtggtaggggagaagctcgattttctcaacgttgcccatatc                                                              <  2:124561‑M1/260‑236 (MQ=255)                                                                                                                                                                                                                                                                                aTGTGTTAAAAACGCTGTAgcagaatgaagcgcggaataaaaaagcggcaactcaataaagttgccgctttacggggaaattagaacattaccttatgaccgtactgctcaagaatgcctttcacgcgttccatggtctctttcttcggtggtctaacaccgtcgagtttgtactcttcacccattgccacccatttgtgtttgcccagctcgtggtaggggagaagctcgattttctcaacgttgcccatatcacgggtaaattcaccgaggcgatgcgctgaatcgtcatcgtcag                  >  1:309620‑M1/1‑19 (MQ=255)                                                                                                                                                                                                                                                                                           aCGCTGTAgcagaatgaagcgcggaataaaaaagcggcaactcaataaagttgccgctttacggggaaattagaacattaccttatgaccgtactgctcaagaatgcctttcacgcgttccatggtctctttcttcggtggtctaacaccgtcgagtttgtactcttcacccattgccacccatttgtgtttgcccagctcgtggtaggggagaagctcgattttctcaacgttgcccatatcacgggtaaattcaccgaggcgatgcgctgaatcgtcatcgtcagaccagcctggg       <  1:95811‑M1/298‑291 (MQ=255)                                                                                                                                                                                                                                                                                                gTAgcagaatgaagcgcggaataaaaaagcggcaactcaataaagttgccgctttacggggaaattagaacattaccttatgaccgtactgctcaagaatgcctttcacgcgttccatggtctctttcttcggtggtctaacaccgtcgagtttgtactcttcacccattgccacccatttgtgtttgcccagctcgtggtaggggcgaagctcgattttctcaacgttgcacctatcacgggtaaattcaccgaggcgatgcgcgtcgtcggcatcgtcagaccagccggagacaac  >  2:202735‑M1/1‑3 (MQ=255)                                                                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                                                                        ATGGGCTGGCTTATGGAGATGGGCACAAATTACCATTCAATAAAGTTCGTTGGGTGGCGCTGGTTGGAGGAGACAAAGAATCATTTGTCCAGATGGGCTGGGAAAAAAATATAAGCGATTATTTAAAAAATATG‑TGCAGTTATCTTGGTATTGAAGATGCCGATGTCACTTTCTTGTGTAATACAGTGGTATTCGATGGGGAAGAACTTCACGCGAGCTATTATCAGTCGTTATTATCTCAGGTACGGGATATGGTAGATGCACTATAAGATGTGTTAAAAACGCTGTAATCGAATTCCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGAAATTTGCGGCCGGGGGATCAATTCCGCGCGCCCGATGAATTGATCCCGGAAGTTCCTATTCTCTAGAAAGTATAGGAACTTCGAATTGGTCGACAAGCTCCCCGATCCACTA  >  CP006584/1010752‑1011335

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑