New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP006584	= 2253835	33 (0.540)	18 (0.310)	17/558	2.4	39.4%	coding (52/414 nt)	LY180_10760	hypothetical protein
	?	CP006584	= 2255646	24 (0.410)					coding (842/1284 nt)	LY180_10775	tail protein

CTACGCCCCAGCCGGTCCAGCTTCCAGACTACCAGTGTATCCCCCTCCGATAATGTCCTGAGCAGTTTTTTCAGTCCCGGCCTGTCGGACTTCGTGCCGCTGATTTTGTCCTCAAAAATCAGCTCACATCCTGCGCACTCCAGCGCGTTACGCTGCAATTCCGTATTCTGGTCATTTGTTGACACGCGTACATAGCCAATAAGCATGAGCATCCCCCTGAATAAAAACCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAACGGGCAAAACCAAATTCCTGATATGTCAGCGTGGGAGTGTGGGGGAGATACAACGACGGGATGGAGGCGAAGCCCGGATGGTTATATTGAACAATGGGGGCTAACTGAGGCCACAACAAATGAAGTTTTGATTAATTTTCCTATCCCATTTCCGACAGCCGTCATTTCTATTAATGAACATGACCAGGCTCCTGTGGCAGGGAAAATGTCAGTATGGCAATTCTATAAATTGACTAACTCAAATGTCATAGCAGAGAACCTGGGATCTCTTGA  >  CP006584/2253548‑2254130                                                                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                                                                        ctacGCCCCAGCCGGTCCAGCTTCCAGACTACCAGTGTATCCCCCTCCGATAATGTCCTGAGCAGTTTTTTCAGTCCCGGCCTGTCGGACTTCGTGCCGCTGATTTTGTCCTCAAAAATCAGCTCACATCCTGCGCACTCCAGCGCGTTACGCTGCAATTCCGTATTCTGGTCATTTGTTGACACGCGTACATAGCCAATAAGCATGAGCATCCCCCTGAATAAAAACCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGgtgctccagct                                                                                                                                                                                                                                                                                              >  1:314262‑M1/1‑288 (MQ=255)        ccAGCCGGTCCAGCTTCCAGACTACCAGTGTATCCCCCTCCGATAATGTCCTGAGCAGTTTTTTCAGTCCCGGCCTGTCGGACTTCGTGCCGCTGATTTTGTCCTCAAAAATCAGCTCACATCCTGCGCACTCCAGCGCGTTACGCTGCAATTCCGTTTTCTGGTCATTTGTTGACACGCTTAAATAACCAATAAGCAAGAGTCTACCCACGAACAAAAAACGGAAAACAATCCAGTGTCCCCGCAGCTCTGCATTTTCATTAAAGGAGGTTTCGGGAAAGGAGCACAACGGGGTGTgg                                                                                                                                                                                                                                                                                       >  2:17117/1‑299 (MQ=255)        ccAGCCGGTCCAGCTTCCAGACTACCAGTGTATCCCCCTCCGATAATGTCCTGAGCAGTTTTTTCAGTCCCGGCCTGTCGGACTTCGTGCCGCTGATTTTGTCCTCAAAAATCAGCTCACATCCTGCGCACTCCAGCGCGTTACGCTGCAATTCCGTATTCTGGTCATTTGTTGACACGCGTACATAGCCAATAAGCATGAGCATCCCCCTGAATAAAAACCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGgtgctccagctattggcg                                                                                                                                                                                                                                                                                       <  1:540121‑M1/299‑19 (MQ=255)                        ccAGACTACCAGTGTATCCCCCTCCGATAATGTCCTGAGCAGTTTTTTCAGTCCCGGCCTGTCGGACTTCGTGCCGCTGATTTTGTCCTCAAAAATCAGCTAACATCCTTCGCACTCCAGCGCGTTACGCTGCAATTCCGTATTCTGGTCATCTGTTGACACGCGTACATAGCCAATAAGCATGCGCATCCCCCTGACTAAAAACCGGAGATGATGCCAGTTGCCCGTTAGCTCTGCCTTTTCATAAACGTTGTGTTGGGAGAAGCGGCAAAACGGGATGTGGGTAACGCGCAAAACCa                                                                                                                                                                                                                                                                       >  2:147757/1‑299 (MQ=255)                        ccAGACTACCAGTGTATCACCCTCCGATAATGTCCTGAGCAGTTTTTTCAGTCCCGGCCTGTCGGACTTCGTGCCGCTGATTTTGTCCTCAAAAATCAGCTCACATCCTGCGCACTCCAGCGCGTTACGCTGCAATTCCGTATTCTGGTCATTTGTTGACACGCGTACATAGCCAATAAGCATGAGCATCCCCCTGAATAAAAACCGGAGATGATGCAAGTTGCGCGTAATCTCTGCATTTTCATAAACGTGGGTTGGGGGGAAGCGGCAAAAAGGGATGTGGGTAACGGGCAAAACCa                                                                                                                                                                                                                                                                       >  1:185584/1‑299 (MQ=255)                                                   tAATGTCCTGAGCAGTTTTTTCAGTCCCGGCCTGTCGGACTTCGTGCCGCTGATTTTGTCCTCAACAATCAGCTCACATCCTGCGCACTCCAGCGCGTTACGCTGCAATTCCGTATTCTGGTCATTTGTTGACACGCGTACATAGCCAATAAGCATGAGCATCCCCCTGAATAAAAACCGGAGATGATGCCAGTTGCCCGTTATCCCTGCATTTTCATAACAGTTGGTTTGGGAGAAGgtgccccagcttttggccttccgttcttctggccctccgccgccatgccaactactttaat                                                                                                                                                                                                                                            >  2:258969‑M1/1‑238 (MQ=255)                                                         ccTGAGCAGTTTTTTCAGTCCCGGCCTGTCGGACTTCGTGCCGCTGATTTTGTCCTCAAAAATCAGCTCACATCCTGCGCACTCCAGCGCGTTACGCTGCAATTCCGTATTCTGGTCATTTGTTGACACGCGTACATAGCCAATAAGCATGAGCATCCCCCTGAATAAAAACCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAACGGGCAAAACCAAATTCCTGATATGTCAGCGTGGGAGTGTggggg                                                                                                                                                                                                                                      >  1:579945/1‑299 (MQ=255)                                                                               ggCCTGTCGGACTTCGTGCCGCTGATTTTGTCCTCAAAAATCAGCTCACATCCTGCGCACTCCAGCGCGTTACGCTGCAATTCCGTATTCTGGTCATTTGTTGACACGCGTACATAGCCAATAAGCATGAGCATCCCCCTGAATAAACACCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGGGCAGCGGCAAAACGGGATGTGGGTAACTGGCAAAACCAAATTCCAGATATGTCATGGTGGGGGTGGGGGGGAGATAAAACGACGGGATGGAgg                                                                                                                                                                                                                >  2:209016/1‑299 (MQ=255)                                                                                  cTGTCGGACTTCGTGCCGCTGATTTTGTCCTCAAAAATCAGCTCACATCCTGCGCACTCCAGCGCGTTACGCTGCAATTCCGTATTCTGGTCATTTGTTGACACGCGTACATAGCCAATAAGCATGAGCATCCCCCTGAATAAAAACCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGgtgctccagctattggcgttccgttcttctggccctccgcggcaatgccaaatactgtaatcgacagctggtccagtatggtgtttttgaag                                                                                                                                                                                                             <  1:116649‑M1/299‑93 (MQ=255)                                                                                    gTCGGACTTCGTGCCGCTGATTTTGTCCTCAAAAATCAGCTCACATCCTGCGCACTCCAGCGCGTTACGCTGCAATTCCGTATTCTGGTCATTTGTTGACACGCGTACATAGCCAATAAGCATGAGCATCCCCCTGAATAAAAACCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGgtgctccagctattggcgttccgttcttctggccctccgcggcaatgccaaatactgtaatcgacagctggtccagtatggtgtttttgaagtt                                                                                                                                                                                                           >  1:99977‑M1/1‑205 (MQ=255)                                                                                      cGGACTTCGTGCCGCTGATTTTGTCCTCAAAAATCAGCTCACATCCTGCGCACTCCAGCGCGTTACGCTGCAATTCCGTATTCTGGTCATTTGTTGACACGCGTACATAGCCAATAAGCATGAGCATCCCCCTGAATAAAAACCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAACGGGCAAAACCAAATTCCTGATATGTCAGCGTGGGAGTGTGGGGGAGATACAACGACGGGATGGAGGCGAAGcc                                                                                                                                                                                                         >  1:645695/1‑299 (MQ=255)                                                                                       ggACTTCGTGCCGCTGATTTTGTCCTCAAAAATCAGCTCACATCCTGCGCACTCCAGCGCGTTACGCTGCAATTCCGTATTCTGGTCATTTGTTGACACGCGTACATAGCCAATAAGCATGAGCATCCCCCTGAATAAAAACCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAACGGGCAAAACCAAATTCCTGATATGTCAGCGTGGGAGTGTGGGGGAGATACAACGACGGGATGGAGGCGAAGccc                                                                                                                                                                                                        <  1:8195/299‑1 (MQ=255)                                                                                                gCCGCTGATTTTGTCCTCAAAAATCAGCTCACATCCTGCGCACTCCAGCGCGTTACGCTGCAATTCCGTATTCTGGTCATTTGTTGACACGCGTACATCGCCAATAAGCATGAGCATCCCCCTGAATAAAAACCGGCGATGATGCCAGCTGCCCGTTATCTCTGCATTTTCATAACAGTTGGTTTGGGAGAAGCGGCAAAACGGGAGGTGGGTAACGGGCAAAACCACATTACTGCTATGCCTGCGTGTGAGGGTGGGGGATACACCACGACGCGAGGAAAGGGAAGACCGGATgggtg                                                                                                                                                                                               >  2:628558/1‑296 (MQ=255)                                                                                                   gCTGATTTTGTCCTCAAAAATCAGCTCACATCCTGCGCACTCCAGCGCGTTACGCTGCAATTCCGTATTCTGGTCATTTGTTGACACGCGTACATAGCCAATAAGCATGATCATCCCCCTGAATAAAACACGGAGATAAGGCACGTTGCCCGTTATCTCTGCATTCTCATAAACGATGGTTTGGGAGAAGCGGCAAAACCGGAGGTGGGTAAACGTCAAAACCCAAGACCCGATATGTCCGAGCGGGGGTGTGGGGGAGAGACAACACAGGGATGGAGGCGAAACGCGGTAGGTtctaa                                                                                                                                                                                            >  2:370934/1‑298 (MQ=255)                                                                                                          ttGTCCTCAAAAATCAGCTCACATCCTGCGCACTCCAGCGCGTTACGCTGCAATTCCGTATTCTGGTCATTTGTTGACACGCGTACATAGCCAATAAGCATGAGCATCCCCCTGAATAAAAACCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAACGGGCAAAACCAAATTCCTGATATGTCAGCGTGGGAGTGTGGGGGAGATACAACGACGGGATGGAGGCGAAGCCCGGATGGTTATATTGAACaa                                                                                                                                                                                     <  1:529850/299‑1 (MQ=255)                                                                                                           tGTCCTCAAAAATCAGCTCACATCCTGCGCACTCCAGCGCGTTACGCTGCAATTCCGTATTCTGGTCATTTGTTGACACGCGTACATAGCCAATAAGCATGAGAATCCCCCTGAATAAAAACCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGGTTGGGAGAAGgtcctccagcttttggcgttccgttcttctggccctccgcggcaattcccaatactgtaatcgaaagatggtccagtatggtgtttttgaagttcaaccgggcgaaactttctgcct                                                                                                                                                                                    >  1:197643‑M1/1‑182 (MQ=255)                                                                                                              ccTCAAAAATCAGCTCACATCCTGCGCACTCCAGCGCGTTACGCTGCAATTCCGTATTCTGGTCATTTGTTGACACGCGTACATAGCCAATAAGCATGAGCATCCCCCTGAATAAAAACCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGCGGCAAAACGGGATGTTGGTAACAGGCAAACACAAATTCTTGAGATGTCAGCGTGGGAGTGGGTGGGGAATACAACTACGATAGGCAGTCGAAGACCGGTTGGTCAGATTGacaaaaggg                                                                                                                                                                                 >  2:253647/1‑291 (MQ=255)                                                                                                                   acaagcctcccacttccttcgcacTCCGTCGCTTTACGCTCCAATTCCGTTTTCTGGTCATTCGTTGAACCGCGTCAATAGCCAATAAGCATGAGCATCCCCCTGAATAAAAACCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGgtgctccagctattggcgttccgttcttctgtccctccgcggcaatgccaaatactgtaatcgacagctggtccagtatggtgtttttgaagtttaacggggcgaaattttctgcctctgattac                                                                                                                                                                            <  2:304280‑M1/289‑126 (MQ=255)                                                                                                                        cAGCTCACATCCTGCGCACTCCAGCGCGTTACGCTGCAATTCCGTATTCTGGTCATTTGTTGACACGCGTACATAGCCAATAAGCATGAGCATCCCCCTGAATAAAAACCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAACGGGCAAAACCAAATTCCTGATATGTCAGCGTGGGAGTGTGGGGGAGATACAACGACGGGATGGAGGCGAAGCCCGGATGGTTATATTGAACAATGGGGGCTAACTGa                                                                                                                                                                       >  1:233085/1‑299 (MQ=255)                                                                                                                                            ccAGCGCGTTACGCTGCAATTCCGTATTCTGGTCATTTGTTGACACGCGTACATAGCCAATAAGCATGAGCATCCCCCTGAATAAAAACCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAACGGGCAAAACCAAATTCCTGATATGTCAGCGTGGGAGTGTGGGGGAGATACAACGACGGGATGGAGGCGAAGCCCGGATGGTTATATTGAACAATGGGGGCTAACTGAGGCCACAACAAATGAAGttt                                                                                                                                                   <  1:209016/299‑1 (MQ=255)                                                                                                                                                        gCTGCAATTCCGTATTCTGGTCATTTGTTGACACGCGTACATAGCCAATAAGCATGAGCATCCCCCTGAATAAAAACCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAACGGGCAAAACCAAATTCCTGATATGTCAGCGTGGGAGTGTGGGGGAGATACAACGACGGGATGGAGGCGAAGCCCGGATGGTTATATTGAACAATGGGGGCTAACTGAGGCCACAACAAATGAAGTTTTGATTAATTTTc                                                                                                                                       >  1:240587/1‑299 (MQ=255)                                                                                                                                                                   gTATTCTGGTCATTTGTTGACACGCGTACATAGCCAATAAGCATGAGCATCCCCCTGAATAAAAACCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAACGGGCAAAACCAAATTCCTGATATGTCAGCGTGGGAGTGTGGGGGAGATACAACGACGGGATGGAGGCGAAGCCCGGATGGTTATATTGAACAATGGGGGCTAACTGAGGCCACAACAAATGAAGTTTTGATTAATTTTCCTATCCCAttt                                                                                                                            <  1:397048/299‑1 (MQ=255)                                                                                                                                                                       tcgtgtcatTTGTTGACACGCGTACATAGCCAATAAGCATGAGCATCCCCCTGAATAAAAACCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGgtgctccagctattggcgttccgttcttctggccctccgcggcaatgccaaatactgtaatcgacagctggtccagtatggtgtttttgaagtttaacggggcgaaattttctgcctctgattaccctgtgctggcgaaagtgtttccttcgctggtattacctgaagcccgcggtg                                                                                                                        <  1:318706‑M1/295‑178 (MQ=255)                                                                                                                                                                         tGGTCATTTGTTGACACGCGTACATAGCCAATAAGCATGAGCATCCCCCTGAATAAAAACCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAACGGGCAAAACCAAATTCCTGATATGTCAGCGTGGGAGTGTGGGGGAGATACAACGACGGGATGGAGGCGAAGCCCGGATGGTTATATTGAACAATGGGGGCTAACTGAGGCCACAACAAATGAAGTTTTGATTAATTTTCCTATCCCATTTCCGACa                                                                                                                      >  1:273407/1‑299 (MQ=255)                                                                                                                                                                             cATTTGTTGACACGCGTACATAGCCAATAAGCATGAGCATCCCCCTGAATAAAAACCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAACGGGCAAAACCAAATTCCTGATATGTCAGCGTGGGAGTGTGGGGGAGATACAACGACGGGATGGAGGCGAAGCCCGGATGGTTATATTGAACAATGGGGGCTAACTGAGGCCACAACAAATGAAGTTTTGATTAATTTTCCTATCCCATTTCCGACAGCCg                                                                                                                  >  1:114808/1‑299 (MQ=255)                                                                                                                                                                                    tgACACGCGTACATAGCCAATAAGCATGAGCATCCCCCTGAATAAAAACCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGgtgctccagctattggcgttccgttcttctggccctccgcggcaatgccaaatactgtaatcgacagctggtccagtatggtgtttttgaagtttaacggggcgaaattttctgcctttgattaccctgtgctggcgaaagtgtttccttagctggtattacctgaagcccggcgtggtttcattcgtgt                                                                                                           >  2:234505‑M1/1‑109 (MQ=255)                                                                                                                                                                                      acacGCGTACATAGCCAATAAGCATGAGCATCCCCCTGAATAAAAACCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAACGGGCAAAACCAAATTCCGGATATGTCAGCGTGGGAGTGTGGGGGAGATACAACGACGGGATGGAGGCGAAGCCCGGAGGGGTATATTGAAAAATGGGGGCTAACTGAGGCCACAAAAAATGAAGTTTTGATTAATTTTCCTACCCCATTACCGACAGCCGTCATTTCTa                                                                                                         >  1:207552/1‑299 (MQ=255)                                                                                                                                                                                       cacGCGTACATAGCCAATAAGCATGAGCATCCCCCTGAATAAAAACCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGgtgctccagctattggcgttccgttcttctggccctccgcggcaatgccaaatactgtaatcgacagctggtccagtatggtgtttttgaagtttaacggggcgaaattttctgcctctgattaccctgtgctggcgaaagtgtttccttcgctggtattacctgaagcccgcggtgatttcattcgtgtctg                                                                                                        <  1:234505‑M1/299‑194 (MQ=255)                                                                                                                                                                                       cacGCGTACATAGCCAATAAGCATGAGCATCCCCCTGAATAAAAACCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAACGGGCAAAACCAAATTCCTGATATGTCAGCGTGGGAGTGTGGGGGAGATACAACGACGGGATGGAGGCGAAGCCCGGATGGTTATATTGAACAATGGGGGCTAACTGAGGCCACAACAAATGAAGTTTTGATTAATTTTCCTATCCCATTTCCGACAGCTGTCATTTCTAt                                                                                                        <  1:88711/299‑1 (MQ=255)                                                                                                                                                                                           cgTACATAGCCAATAAGCATGAGCATCCCCCTGAATAAAAACCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGgtgctccagctattggcgttccgttcttctggccctccgcggcaatgccaaatactgtaatcgacagctggtccagtatggtgtttttgaagtttaacggggcgaaattttctgcctctgattaccctgtgctggcgaaagtgtttccttcgctggtattacctgaagcccgcggtgatttcattcgtgtctgggat                                                                                                    <  1:258969‑M1/299‑198 (MQ=255)                                                                                                                                                                                                 gagccaagacacgtGAGCATCCCCCTGAATAACAACCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAGGCGGCAAAACGGGAGGTGGGTAACGGGCAAAACCAAATTCCTGATAGGTCAGCGTGGGAGTGTGGGGGAGATACAACGACGGGATGGAGGCGAAGCCCGGATGGTTATATTGAACAATGGGGGCTAACTGAGGCCACAACAAATGAAGTTTTGATTAATTTTCCTATCCCATTTCCGACAGCCGTCATTTCTATTAATGAACAt                                                                                              <  2:233085/286‑1 (MQ=255)                                                                                                                                                                                                             ctGAGCCTTCCCCTGAAGAAAGACCGGGGATGATGCCAGTTGCCCGTTATCTCTGCATGTTCATAAAGTTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAACGGGCAAAACCAAATTCCTGATATGTCAGCGTGGGAGTGTGGGGTAGATACAACGACGGGATGGAGGCGAAGCCCGGATGGTTATATTGAACAATGGGGGCTAACTGAGGCCACAACAAATGAAGTTTTGATTAATTTTCCTATCCCATTTCCGACAGCCGTCATTTCTATTAATGAACATGACCAGGCTCCt                                                                                  <  2:579945/298‑1 (MQ=255)                                                                                                                                                                                                             aTGAGCATCCCCCTGAATAAAAACCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAACGGGCAAAACCAAATTCCTGATATGTCAGCGTGGGAGTGTGGGGGAGATACAACGACGGGATGGAGGCGAAGCCCGGATGGTTATATTGAACAATGGGGGCTAACTGAGGCCACAACAAATGCAGTTTTGATTAATTTTCCTATCCCATTTCCGACAGCCGTCATTTCTATTAATGAACATGACCAGGCTCCt                                                                                  >  1:12983/1‑299 (MQ=255)                                                                                                                                                                                                             aTGAGCATCCCCCTGAATAAAAACCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAACGGGCAAAACCAAATTCCTGATATGTCAGCGTGGGAGTGTGGGGGAGATACAACGACGGGATGGAGGCGAAGCCCGGATGGTTATATTGAACAATGGGGGCTAACTGAGGCCACAACAAATGAAGTTTTGATTAATTTTCCTATCCCATTTCCGACAGCCGTCATTTCTATTAATGAACATGACCAGGCTCCt                                                                                  <  1:147757/299‑1 (MQ=255)                                                                                                                                                                                                                 gCATCCCCCTGAATAAAAACCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGgtgctccagctattggcgttccgttcttctggccctccgcggcaatgccaaatactgtaatcgacagctggtccagtatggtgtttttgaagtttaacggggcgaaattttctgcctctgattaccctgtgctggcgaaagtgtttccttcgctggtattacctgaagcccgcggtgatttcattcgtgtctgggatgacgggcgaggtgcagatggtg                                                                              >  1:400515‑M1/1‑80 (MQ=255)                                                                                                                                                                                                                   atccccggaaataaaagccgGGGATGTGTCCAGTTGCTCGTTATCTTGGCATTTGCAGAACCGTTGGTTTGGGAGAAGgtgctcacgctattgtggttccgttcttctggccctccgcggcaatgccaaatactgtaatggacagctggtccagtatggtgtttttgaagtttgacggggcgaaattttctgcctctgattaccctgtgctggcgaaagtgtttccttcgctggtattacctgaagcccgcggtgatttcattcgtgtctgggatgacgggcgaggtgcagatggtggt                                                                            <  2:347718‑M1/290‑222 (MQ=255)                                                                                                                                                                                                                     cccccTTAATAAAAACCGGAGCTGATGCCAGTTGACCGTTAACTCTGGAGGTTCATTAACGTTGGTTTGGGAGACGgtgctccagagattggcgttccgttcttctggccctccgcggcaatgccaaatactgtaatcgacagctggtccaggatggtggttttgaagtttaacggggcgaaattttctgcctctgattaccctgtgctggcgaaagtgtttccttcgctggtattacctggagcccgcggtgatttcattcgtgtctgggatgacgggcgaggtgcagatggtggtcg                                                                          <  2:584561‑M1/299‑224 (MQ=255)                                                                                                                                                                                                                         cTGAATAAAAACCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAACGGGCAAAACCAAATTCCTGATATGTCAGCGTGGGAGTGTGGGGGAGATACAACGACGGGATGGAGGCGAAGCCCGGATGGTTATATTGAACAATGGGGGCTAACTGAGGCCACAACAAATGAAGTTTTGATTAATTTTCCTATCCCATTTCCGACAGCCGTCATTTCTATTAATGAACATGACCAGGCTCCTGTGGCAGGGaaa                                                                      >  1:312371/1‑299 (MQ=255)                                                                                                                                                                                                                                      ggAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGgtgctccagctattggcgttccgttcttctggccctccgcggcaatgccaaatactgtaatcgacagctggtccagtatggtgtttttgaagtttaacggggcgaaattttatgcctctgattaccctgtgctggcgaaagtgtttccttcgctggtattacctgaagcccgcggtgatttctttcgtgtctgggtgtaagggcgaggtgcagatggtgctggcgaagtattaagtttga                                                         >  2:294892‑M1/1‑59 (MQ=255)                                                                                                                                                                                                                                      ggAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAACGGGCAAAACCAAATTCCTGATATGTCAGCGTGGGAGTGTGGGGGAGATACAACGACGGGATGGAGGCGAAGCCCGGATGGTTATATTGAACAATGGGGGCTAACTGAGGCCACAACAAATGAAGTTTTGATTAATTTTCCTATCCCATTTCCGACAGCCATCATTTCTATTAATGAACATGACCAGGCTCCTGTGGCAGGGAAAATGTCAGTATGGc                                                         >  1:350433/1‑299 (MQ=255)                                                                                                                                                                                                                                       tagatGGTGCCGGTTGCCCGTTATCCCTGCATTTTCATAAACGTTGGTTTGGGAGAAGgtgctccagctattggcgttccgttcttctggccctccgcggcaatgccaaatactgtaatcgacagctggtccagtatggtgtttttgaagtttaacggggcgaaattttctgcctctgattaccctgtgctggcgaaagtgtttccttcgctggtattacctgaagcccgcggtgatttcattcgtgtctgggatgacgggcgaggtgcagatggtggtcgcgaattattaagctggca                                                        <  2:314262‑M1/298‑242 (MQ=255)                                                                                                                                                                                                                                       gagaGGTTGCCATTTCCCCTTTTTCTCGCGATTTTCATAGACTTTGGTTTGGGAGAAGgtgctccagctattggcgttccgttcttctggccctccgcggcaatgccaaatactgtaatcgacagctggtccagtatggtgtttttgaagtttaacggggcgaaattttctgcctctgattaccctgtgctggcgaaagtgtttccttcgctggtattacctgaagcccgcggtgatttcattcgtgtctgggatgacgggcgaggtgcagatggtggtcgcgaattattaagctggca                                                        <  2:243449‑M1/299‑242 (MQ=255)                                                                                                                                                                                                                                                ccAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAACGGGCAAAACCAAATTCCTGATATGTCAGCGTGGGAGTGTGGGGGAGATACAACGACGGGATGGAGGCGAAGCCCGGATGGTTATATTGAACAATGGGGGCTAACTGAGGCCACAACAAATGAAGTTTTGATTAATTTTCCTATCCCATTTCCGACAGCCGTCATTTCTATTAATGAACATGACCAGGCTCCTGTGGCAGGGAAAATGTCAGTATGGCAATTCTATaa                                               >  1:506649/1‑299 (MQ=255)                                                                                                                                                                                                                                                 cAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAACGGGCAAAACCAAATTCCTGATATGTCAGCGTGGGAGTGTGGGGGAGATACAACGACGGGATGGAGGCGAAGCCCGGATGGTTATATTGAACAATGGGGGCTAACTGAGGCCACAACAAATGAAGTTTTGATTAATTTTCCTATCCCATTTCCGACAGCCGTCATTTCTATTAATGAACATGACCAGGCTCCTGTGGCAGGGAAAATGTCAGTATGGCAATTCTATaaa                                              <  1:17117/299‑1 (MQ=255)                                                                                                                                                                                                                                                         cGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGgtgctccagctattggcgttccgttcttctggccctccgcggcaatgccaaatactgtaatcgccagctggtccagtatggtgtttttgaagtttaacggggcgaaattttctgcctctgattaccctgtgctggcgaaagtgtttccttcgctggtattacctgaagcccgcggtgatttctttcgtgtctgggatgacggccggggtgcgtacgtgggtcgtaaattgttccgcaggcaggaagctccaaacttttc                                      >  2:389005‑M1/1‑40 (MQ=255)                                                                                                                                                                                                                                                               ctctGCATTTTCATAAACGTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAACGGGCAAAACCAAATTCCTGATATGTCAGCGTGGGAGTGTGGGGGAGATACAACGACGGGATGGAGGCGAAGCCCGGATGGTTATATTGAACAATGGGGGCTAACTGAGGCCACAACAAATGAAGTTTTGATTAATTTTCCTATCCCATTTCCGACAGCCGTCATTTCTATTAATGAACATGACCAGGCTCCTGTGGCAGGGAAAATGTCAGTATGGCAATTCTATAAATTGACTAACTCaaa                                >  1:179421/1‑299 (MQ=255)                                                                                                                                                                                                                                                                  tggaTTTTCAAAAACGTTGGGTTGGGAGAAGCGGCAAAACGTGATGGGGGGAACGGGAAAAAGCAAATTCCTGATAGGTCAGCGGGGGAGTGTGGGGGAGATACAACGACGGGATGGAGGCGAAGCCCGGATGGTTAGATTGAACAATTGGGGCTAACTGAGGCCACAACAAATGAAGTTTTGATTAATTTTCCTATCCCATTTCCGACAGCCGTCATTTCTATTAATGAACATGACCAGGCTCCTGTGGCAGGGAAAATGTCAGTATGGCAATTCTATAAATTGACTAACTCAAATGt                             <  2:114808/296‑1 (MQ=255)                                                                                                                                                                                                                                                                     cttttcgcggtccgtggtttggggtaaggtccatcagatacttgcgttccgttcttctgggcctccgcgggaatgccaaatactgttagtgacagctggtccagtatggtgtttttgaagtttaacggggcgaaatttcctgcctctgagtaccctgcgctggcgaaagtgtttccttcgctggtattacctgaagcccgcggtgatttcattcgtgtctgggatgacgggcgaggtgcagatggtggtcgcgaattattaagctggcaggaagctacaaacttttctcagtttgccgg                          <  2:28821‑M1/285‑272 (MQ=255)                                                                                                                                                                                                                                                                       tttCATAAACGTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAACGGGCAAAACCAAATTCCTGATATGTCAGCGTGGGAGTGTGGGGGAGATACAACGACGGGATGGAGGCGAAGCCCGGATGGTTATATTGAACAATGGGGGCTAACTGAGGCCACAACAAATGAAGTTTTGATTAATTTTCCTATCCCATTTCCGACAGCCGTCATTTCTATTAATGAACATGACCAGGCTCCTGTGGCAGGGAAAATGTCAGTATGGCAATTCTATAAATTGACTAACTCAAATGTCATAg                        <  1:407062/299‑1 (MQ=255)                                                                                                                                                                                                                                                                                   tGGTTTGGGAGAAGgtgctccagctattggcgttccgttcttctggccctccgcggcaatgccaaatactgtaatcgacagctggtccagtatggtgtttttgaagtttaacggggcgaaattttctgcctctgattaccctgtgctggcgaaagtgtttccttcgctggtcttacctgacgcccgcgttgatttcattcgtgtctgggatgacgggcggggtgcagagggtggtcgcgaattcttaaggtggcagcaagctacaaacttttctcagtttgccgggaaaatagacggag            >  2:42002‑M1/1‑14 (MQ=255)                                                                                                                                                                                                                                                                                   tGGTTTGGGAGAAGgtgctccagctattggcgttccgttcttctggccctccgcggcaatgccaaatactgtaatcgacagctggtccagtatggtgtttttgaagtttaacggggcgaaattttctgcctctgattaccctgtgctggcgaaagtgtttccttcgctggtattacctgaagcccgcggtgatttcattcgtgtctgggatgacgggcgaggtgcagatggtggtcgcgaattattaagctggcaggaagctacaaacttttctcagtttgccgggaatataggcggag            <  1:267719‑M1/299‑286 (MQ=255)                                                                                                                                                                                                                                                                                   tGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAACGGGCAAAACCAAATTCCTGATATGTCAGCGTGGGAGTGTGGGGGAGATACAACGACGGGATGGAGGCGAAGCCCGGATGGTTATATTGAACAATGGGGGCTAACTGAGGCCACAACAAATGAAGTTTTGATTAATTTTCCTATCCCATTTCCGACAGCCGTCATTTCTATTAATGAACATGACCAGGCTCCTGTGGCAGGGAAAATGTCAGTATGGCAATTCTATAAATTGACTAACTCAAATGTCATAGCAGAGAACCTgg            >  1:177289/1‑299 (MQ=255)                                                                                                                                                                                                                                                                                    gggtggggAGAAGCGGCAAAACGGGATGTGGGGAACGGGCAAAACCAAATTCCTGATATGTCAGCGGGGGGGTGTGGGGGAGATACAACGACGGGATGGAGGCGAAGCCCGGATGGTTATATTGAACAATGGGGGCTAACTGAGGCCACAACAAATGCAGTTTTGATTAATTTTCCTATCCCATTTCCGACAGCCGTCATTTCTATTAATGAACATGACCAGGCTCCTGTGGCAGGGAAAATGTCAGTATGGCAATTCTATAAATTGACTAACTCAAATGTCATAGCAGAGAACCTggg           <  2:12983/294‑1 (MQ=255)                                                                                                                                                                                                                                                                                             gaAGCGGCAAAACGGGATGTGGGTAACGGGCAAAACCAAATTCCTGATATGTCAGCGTGGGAGTGTGGGGGAGATACAACGACGGGATGGAGGCGAAGCCCGGATGGTTATATTGAACAATGGGGGCTAACTGAGGCCACAACAAATGAAGTTTTGATTAATTTTCCTATCCCATTTCCGACAGCCGTCATTTCTATTAATGAACATGACCAGGCTCCTGTGGCAGGGCAAATGTCAGTATGGCAATTCTAAAAATTGACTAACTCAAATGTCATCGCAAGAAACCTGGAATCTCTTGa  >  2:298364/1‑299 (MQ=255)                                                                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                                                                        CTACGCCCCAGCCGGTCCAGCTTCCAGACTACCAGTGTATCCCCCTCCGATAATGTCCTGAGCAGTTTTTTCAGTCCCGGCCTGTCGGACTTCGTGCCGCTGATTTTGTCCTCAAAAATCAGCTCACATCCTGCGCACTCCAGCGCGTTACGCTGCAATTCCGTATTCTGGTCATTTGTTGACACGCGTACATAGCCAATAAGCATGAGCATCCCCCTGAATAAAAACCGGAGATGATGCCAGTTGCCCGTTATCTCTGCATTTTCATAAACGTTGGTTTGGGAGAAGCGGCAAAACGGGATGTGGGTAACGGGCAAAACCAAATTCCTGATATGTCAGCGTGGGAGTGTGGGGGAGATACAACGACGGGATGGAGGCGAAGCCCGGATGGTTATATTGAACAATGGGGGCTAACTGAGGCCACAACAAATGAAGTTTTGATTAATTTTCCTATCCCATTTCCGACAGCCGTCATTTCTATTAATGAACATGACCAGGCTCCTGTGGCAGGGAAAATGTCAGTATGGCAATTCTATAAATTGACTAACTCAAATGTCATAGCAGAGAACCTGGGATCTCTTGA  >  CP006584/2253548‑2254130

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.