New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP006584	= 2253835	33 (0.540)	18 (0.310)	17/558	2.4	39.4%	coding (52/414 nt)	LY180_10760	hypothetical protein
	?	CP006584	= 2255646	24 (0.410)					coding (842/1284 nt)	LY180_10775	tail protein

CTCCGCCTATATTCCCGGCAAACTGAGAAAAGTTTGTAGCTTCCTGCCAGCTTAATAATTCGCGACCACCATCTGCACCTCGCCCGTCATCCCAGACACGAATGAAATCACCGCGGGCTTCAGGTAATACCAGCGAAGGAAACACTTTCGCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACCTTCTCCCAAACCAAGGTATGCGAGAAGACCAGCCACATCTTTTCCACTCAAATGAGTCAGCGTCTCATCCAGTGGTTGCTTACCTGACAGCGCATTGTTAATGGTGGTGCTGAATTTCGGGTCATTGTTAATGGCTGCGGCAATTTCTTTCAGTGTATCCAGCGTGGCAGGCGCACCGTTAATCAGAGCGGTAATAGCGGCCTGAACAAACGCAGTAGTCGCAATCCGCGTGGTGTTATTTCCTGCGGCAGGCGTCGGCGCTTTTGGTTCTCCGGTAAATGTCGGATT  >  CP006584/2255362‑2255935                                                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                                                                  cTCCGTCTATTTTCCCGGCAAACTGAGAAAAGTTTGTAGCTTGCTGCCACCTTAAGAATTCGCGACCACCCTCTGCACCCCGCCCGTCATCCCAGACACGAATGAAATCAACGCGGGCGTCAGGTAAGACCAGCGAAGGAAACACTTTCGCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACcttctcccaaacca                                                                                                                                                                                                                                                                                     >  2:42002‑M2/1‑285 (MQ=255) cTCCGCCTATATTCCCGGCAAACTGAGAAAAGTTTGTAGCTTCCTGCCAGCTTAATAATTCGCGACCACCATCTGCACCTCGCCCGTCATCCCAGACACGAATGAAATCACCGCGGGCTTCAGGTAATACCAGCGAAGGAAACACTTTCGCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACcttctcccaaacca                                                                                                                                                                                                                                                                                     <  1:267719‑M2/299‑15 (MQ=255)      ccTATATTCCCGGCAAACTTATAAAAGTTTCTAGCTTCCTGCCAGATTAATAATTCGCGACCACCAGCGGAACCTCGCCCGTCATCCCAGACACGAATGAAATCACCGCGGGCTTCAGGTAATACCAGCGAAGGCAACACTTTCGCCAGCACAGGGTAATCCGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACCTTCTCCCAAACCAAGGTa                                                                                                                                                                                                                                                                                <  2:529569/299‑1 (MQ=255)               ccGGCAAACTGAGAAAAGTTTGTAGCTTCCTGCCAGCTTAATAATTCGCGACCACCATCTGCACCTCGCCCGTCATCCCAGACACGAATGAAATCACCGCGGGCTTCAGGTAATACCAGCGAAGGAAACACTTTCGCCAGCGCAGGGTACTCAGAGGCAGGAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCACTAACAGTATTTGGCATTCCCGCGGAGGCCCAGAAGAACGGAACGCAAGTATCTGATGGACcttaccccaaaccacggaccgcgaaaag                                                                                                                                                                                                                                                                       <  2:28821‑M2/299‑29 (MQ=255)                           gaAAAGTTTGGAGCTTCCTGCCTGCGGAACAATTTACGACCCACGTACGCACCCCGGCCGTCATCCCAGACACGAAAGAAATCACCGCGGGCTTCAGGTAATACCAGCGAAGGAAACACTTTCGCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGGCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACcttctcccaaaccaacgtttatgaaaatgcagagataacg                                                                                                                                                                                                                                                           >  2:389005‑M2/1‑259 (MQ=255)                                   tGTAGCTCCCCGTCAACTTACAAATGGGCCACGACCGTCTTCACCTCGGCCGAGCACCCAGAGAGGAATGAAATGACCGCGGGCTTCATGTAATACCGGCGAAGGAATGACTTTCGCCAGCGCAGGGTAATCATGTGCAGAGAATTGCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACCTTCTCCCAAACCAAGGTATGCGAGAAGACCAGCCACATCTTTTCCAc                                                                                                                                                                                                                                                   <  2:339908/299‑1 (MQ=255)                                    gTAGCTTCCTGCCAGCTTAATAATTCGCGACCACCATCTGCACCTCGCCCGTCATCCCAGACACGAATGAAATCACCGCGGGCTTCAGGTAATACCAGCGAAGGAAACACTTTCGCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACCTTCTCCCAAACCAAGGTATGCGAGAAGACCAGCCACATCTTTTCCACt                                                                                                                                                                                                                                                  >  1:497209/1‑299 (MQ=255)                                         ttCCTGCCAGCTTAATAATTCGCGACCACCATCTGCACCTCGCCCGTCATCCCAGACACGAATGAAATCACCGCGGGCTTCAGGTAATACCAGCGAAGGAAACACTTTCGCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACCTTCTCCCAAACCAAGGTATGCGAGAAGACCAGCCACATCTTTTCCACTCAAAt                                                                                                                                                                                                                                             >  1:89042/1‑299 (MQ=255)                                             tGCCAGCTTAATAATTCGCGACCACCATCTGCACCTCGCCCGTCATCCCAGACACGAATGAAATCACCGCGGGCTTCAGGTAATACCAGCGAAGGAAACACTTTCGCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACcttctcccaaaccaacgtttatgaaaatgcagggataacgggcaaccggcaccatcta                                                                                                                                                                                                                                         <  2:314262‑M2/299‑59 (MQ=255)                                             tGCCAGCTTAATAATTCGCGACCACCATCTGCACCTCGCCCGTCATCCCAGACACGAATGAAATCACCGCGGGCTTCAGGTAATACCAGCGAAGGAAACACTTTCGCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACcttctcccaaaccaaagtctatgaaaatcgcgagaaaaaggggaaatggcaacctctc                                                                                                                                                                                                                                         <  2:243449‑M2/299‑59 (MQ=255)                                              tcaaacttaatACTTCGCCAGCACCATCTGCACCTCGCCCTTACACCCAGACACGAAAGAAATCACCGCGGGCTTCAGGTAATACCAGCGAAGGAAACACTTTCGCCAGCACAGGGTAATCAGAGGCATAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACcttctcccaaaccaacgtttatgaaaatgcagagataacgggcaactggcatcatctcc                                                                                                                                                                                                                                        >  2:294892‑M2/6‑240 (MQ=255)                                                  gCTTAATAATTCGCGACCACCATCTGCACCTCGCCCGTCATCCCAGACACGAATGAAATCACCGCGGGCTTCAGGTAATACCAGCGAAGGAAACACTTTCGCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACCTTCTCCCAAACCAAGGTATGCGAGAAGACCAGCCACATCTTTTCCACTCAAATGAGTCAGCg                                                                                                                                                                                                                                    >  1:527250/1‑299 (MQ=255)                                                       ataatTCGCGACCACCATCTGCACCTCGCCCGTCATCCCAGACACGAATGAAATCACCGCGGGCTTCAGGTAATACCAGCGAAGGAAACACTTTCGCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGCACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGACCGCGACGCCAATAGCTGGAGCACCCTCCCGCAAACCAAGGTATCCGAGAAGACAAGCCCAACATTTACCACTCAACTGATTTTGCGTCCCa                                                                                                                                                                                                                               >  2:171128/1‑299 (MQ=255)                                                               cgACCACCATCTGCACCTCGCCCGTCATCCCAGACACGAATGAAATCACCGCGGGCTCCAGGTAATACCAGCGAAGGAAACACTTTCGCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAACCACCATCCTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATCTCTGGAGCACcgtctcccaaaccaacgttaatgaacctccagagttaacggtcaactggcatcagctccggtttttattaaggggg                                                                                                                                                                                                                       <  2:584561‑M2/299‑77 (MQ=255)                                                                 accaccATCTGCACCTCGCCCGTCATCCCAGACACGAATGAAATCACCGCGGGCTTCAGGTAATACCAGCGAAGGAAACACTTTCGCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTCAAACTTCAAAAACACCATACTGGACCAGCTGTCCATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACCACAATAGCGTGAGCACcttctcccaaaccaacggttctgcaaatgccaagataacgagcaactggacacatccccggcttttatttccggggat                                                                                                                                                                                                                     <  2:347718‑M2/299‑79 (MQ=255)                                                                   caccaTCTGCACCTCGCCCGTCATCCCAGACACGAATGAAATCACCGCGGGCTTCAGGTAATACCAGCGAAGGAAACACTTTCGCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACcttctcccaaaccaacgtttatgaaaatgcagagataacgggcaactggcatcatctccggtttttattcagggggatgc                                                                                                                                                                                                                   >  1:400515‑M2/1‑219 (MQ=255)                                                                           gCACCTCGCCCGTCATCCCAGACACGAATGAAATCACCGCGGGCTTCAGGTAATACCAGCGAAGGAAACACTTTCGCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGCTTACAGTATTTGGCCTTGCCCCGCAGGCCCAGAATGACCGACCGCCCATAGCTGGAGCACCTTACCCCACACCAAGGTATGCGAGAAGACCAGCCACACCCTTCCCACCAAACTGAGACAGCGACGCATCCAGTGGCTGCttcctcga                                                                                                                                                                                                           >  2:36253/1‑293 (MQ=255)                                                                                         aTCCCAGACACGAATGAAATCACCGCGGGCTTCAGGTAATACCAGCGAAGGAAACACTTTCGCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACcttctcccaaaccaacgtttatgaaaatgcagagataacgggcaactggcatcatctccggtttttattcagggggatgctcatgcttattggctatgtacg                                                                                                                                                                                             <  1:258969‑M2/299‑103 (MQ=255)                                                                                             cAGACACGAATGAAATCACCGCGGGCTTCAGGTAATACCAGCGAAGGAAACACTTTCGCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACcttctcccaaaccaacgtttatgaaaatgcagagataacgggcaactggcatcatctccggtttttattcagggggatgctcatgcttattggctatgtacgcgtg                                                                                                                                                                                         <  1:234505‑M2/299‑107 (MQ=255)                                                                                                acacGAATGAAACCACGCCGGGCTTCAGGTAATACCAGCTAAGGAAACACTTTCGCCAGCACAGGGTAATCAAAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACcttctcccaaaccaacgtttatgaaaatgcagagataacgggcaactggcatcatctccggtttttattcagggggatgctcatgcttattggctatgtacgcgtgtca                                                                                                                                                                                      >  2:234505‑M2/1‑190 (MQ=255)                                                                                                             cACCGCGGGCTTCAGGTAATACCAGCGAAGGAAACACTTTCGCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACcttctcccaaaccaacgtttatgaaaatgcagagataacgggcaactggcatcatctccggtttttattcagggggatgctcatgcttattggctatgtacgcgtgtcaacaaatgacacga                                                                                                                                                                         <  1:318706‑M2/299‑123 (MQ=255)                                                                                                                      cTTCAGGTAATACCAGCGAAGGAAACACTTTCGCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACCTTCTCCCAAACCAAGGTATGCGAGAAGACCAGCAACATCTTTTCCACTCAAATGAGTCAGCGTCTCATCCAGTGGTTGCTTACCTGACAGCGCATTGTTAATGGTGGTGCTGAATTTCGGGTCATTGTTa                                                                                                                                                                >  1:459617/1‑299 (MQ=255)                                                                                                                                   cAGCGAAGGAAACACTTTCGCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACCTTCTCCCAAACCAAGGTATGCGAGAAGACCAGCCACATCTTTTCCACTCAAATGAGTCAGCGTCTCATCCAGTGGTTGCTTACCTGACAGCGCATGGTTAATGGTGGTGCTGAATTTCGGGTCATTGTTAATGGCTGCGGCaa                                                                                                                                                   >  1:484194/1‑299 (MQ=255)                                                                                                                                    aGCGAAGGAAACACTTTCGCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACCTTCTCCCAAACCAAGGTATGCGAGAAGACCAGCCACATCTTTTCCACTCAAATGAGTCAGCGTCTCATCCAGTGGTTGCTTACCTGACAGCGCATTGTTAATGGTGGTGCTGAATTTCGGGTCATTGTTAATGGCTGCGGCAAt                                                                                                                                                  <  1:320208/299‑1 (MQ=255)                                                                                                                                        aaGGAAACACTTTCGCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACCTTCTCCCAAACCAAGGTATGCGAGAAGACCAGCCACATCTTTTCCACTCAAATGAGTCAGCGTCTCATCCAGTGGTTGCTTACCTGACAGCGCATTGTTAATGGTGGTGCTGAATTTCGGGTCATTGTTAATGGCTGCGGCAAtttct                                                                                                                                              >  1:2686/1‑299 (MQ=255)                                                                                                                                           gtaaCACTTTCGCCAACACAGGGTAATCACAGGTAGTAAATCTCGCCCATTTAAACTTCAAAAATACCAGACTGGACCCGATGTCGAGTACAGTAGTTTGCATTGCCTCGGAGGGCCAGAAGAACGGTACGCCAATCGCTGGAGCACCTTCTCCCAAACCAAGGTATGCGAGAAGACCAGCCACATCTTTTCCACTCAAATTAGTCAGCGTCTCATCCAGTGTTTGCTTACCTGACAGCGCATTGTTAATGGTGGTTCTGAATTTCGGGTCATTGTTAATGGCTGCGGCAAtttctttc                                                                                                                                           <  2:289378/297‑1 (MQ=255)                                                                                                                                               cacTTTCGCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACCTTCTCCCAAACCAAGGTATGCGAGAAGACCAGCCACATCTTTTCCACTCAACTGAGTCAGCGTCTCATCCAGTGGTTGCTTACCTGACAGCGCATTGTTAATGGTGGTGCTGAATTTCGGGTCATTGTTAATGGCTGCGGCAATTTCTTTCAgtg                                                                                                                                       >  1:236504/1‑299 (MQ=255)                                                                                                                                                 cTTTCGCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACCTTCTCCCAAACCAAGGTATGCGAGAAGACCAGCCACATCTTTTCCACTCAAATGAGTCAGCGTCGCATCCAGTGGTTGCTTACCGGACAGCGCATTGTTACTGGTGGTGCTGAATGTCGGGTCATTTTTAATGGCTGCGGCAATTTCTTTCAGCGTa                                                                                                                                     >  2:476620/1‑299 (MQ=255)                                                                                                                                                                 gTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGACAGAAGAACGGAACGCCAATAGCTGGAGCACcttctcccaaaccaacgtttatgaaaatgcagagataacgggcaactggcatcatctccggtttttattcagggggatgctcatgcttattggctattgacgcggttcaacgaatgaccagaaaacggaattggagcgtaaagcgacggagtgcgaaggaagtgggaggcttgt                                                                                                                     <  2:304280‑M2/299‑175 (MQ=255)                                                                                                                                                                  tAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACCTTCTCCCAAACCAAGGTATGCGAGAAGACCAGCCACATCTTATCCACTCAAATGAGTCAGCGTCTCATCCAGTGGTTGCTTACCTGACAGCGCATTGTTAATGGTGGTGCTGAATTTCGGGTCATTGTTAATGGCTGCGGCAATTTCTTTCAGTGTATCCAGCGTGGCAGgcgc                                                                                                                    >  1:283590/1‑299 (MQ=255)                                                                                                                                                                         agGCAGAAAGTTTCGCCCGGTTGAACTTCAAAAACACCATACTGGACCATCTTTCGATTACAGTATTGGGAATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAAAAGCTGGAGGACcttctcccaacccaacgtttatgaaaatgcagagataacgggcaactggcatcatctccggtttttattcagggggattctcatgcttattggctatgtacgcgtgtcaacaaatgaccagaatacggaattgcagcgtaacgcgctggagtgcgcaggatgtgagctgatttttgaggaca                                                                                                             >  1:197643‑M2/1‑117 (MQ=255)                                                                                                                                                                                                aaCTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACcttctcccaaaccaacgtttatgaaaatgcagagataacgggcaactggcatcatctccggtttttattcagggggatgctcatgcttattggctatgtacgcgtgtcaacaaatgaccagaatacggaattgcagcgtaacgcgctggagtgcgcaggatgtgagctgatttttgaggacaaaatcagcggcacgaagtccgac                                                                                      >  1:99977‑M2/1‑94 (MQ=255)                                                                                                                                                                                                  cTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACcttctcccaaaccaacgtttatgaaaatgcagagataacgggcaactggcatcatctccggtttttattcagggggatgctcatgcttattggctatgtacgcgtgtcaacaaatgaccagaatacggaattgcagcgtaacgcgctggagtgcgcaggatgtgagctgatttttgaggacaaaatcagcggcacgaagtccgacag                                                                                    <  1:116649‑M2/299‑208 (MQ=255)                                                                                                                                                                                                       acaccacCATGCTGGACCAGCTGTCGATTACAGTATTTGGCGTTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACCTTCTCCCAAACCAAGGTATGCGAGAAGACCAGCCACATCTTTTCCACTCAAATGAGTCAGCGTCTCATCCAGTTGTTGCTTACCTGACAGCGCATTGTTAATGGTGGTGCTGAATTTCGGGTCATTGTTAATGGCTGCGGCAATTTCTTTCAGTGTATCCAGCGTGGCAGGCGCACCGTTAATCAGAGCGGTAATAGCGGCCTGAACAAAc                                                                               <  2:497209/295‑1 (MQ=255)                                                                                                                                                                                                          acacCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACCTTCTCCCAAACCAAGGTATGCGAGAAGACCAGCCACATCTTTTCCACTCAAATGAGTCAGCGTCTCATCCAGTGGTTGCTTACCTGACAGCGCATTGTTAATGGTGGTGCTGAATTTCGGGTCATTGTTAATGGCTGCGGCAATTTCTTTCAGTGTATCCAGCGTGGCAGGCGCACCGTTAATCAGAGCGGTAATAGCGGCCTGAACAAACGCa                                                                            <  1:572265/299‑1 (MQ=255)                                                                                                                                                                                                                   tGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACCTTCTCCCAAACCAAGGTATGCGAGAAGACCAGCCACATCTTTTCCACTCAAATGAGTCAGCGTCTCATCCAGTGGTTGCTTACCTGACAGCGCATTGTTAATGGTGGTGCTGAATTTCGGGTCATTGTTAATGGCTGCGGCAATTTCTTTCAGTGTATCCAGCGTGGCAGGCGCACCGTTAATCAGAGCGGTAATAGCGGCCTGAACAAACGCAGTAGTCGCa                                                                   >  1:317228/1‑299 (MQ=255)                                                                                                                                                                                                                        cAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACCTTCTCCCAAACCAAGGTATGCGAGAAGACCAGCCACATCTTTTCCACTCAAATGAGTCAGCGTCTCATCCAGTGGTTGCTTACCTCACAGCGCATTGTTAATGGTGGTGCTGAATTTCGGGTCATTGTTAATGGCTGCGGCAATTTCTTTCAGTGTCTCCACCGTGACAGTCGCCCCGTTAAACAGAGCGGTAATACCGGCCTGAACAAACACAGTAGGCCCAAGCcg                                                              >  2:9603/1‑299 (MQ=255)                                                                                                                                                                                                                         aGCTGTCGATTACAGTATCTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACCTTCTCCCAAACCAAGGTATGCGAGAAGACCAGCCACATCTTTTCCACTCAAATGAGTCAGCGTCTCATCCAGTGGTTGCTTACCTGACAGCGCATTGTTAATGGTGGTGCTGAATTTCGGGTCATTGTTAATGGCTGCGGCAATTTCTTTCAGTGTATCCAGCGTGGCAGGCGCACCGTTAATCAGAGCGGTAATAGCGGCCTGAACAAACGCAGTAGTCGCAATCcgc                                                             >  1:452593/1‑299 (MQ=255)                                                                                                                                                                                                                               cGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCAGCTTCTCCCAAACCAAGGTATGCGAGAAAACCAGCCACATCTTTTCCACTCAAATGAGTCAGCGTCTCATCCAGTGGTTGCTTACCTGACAGCGCATTGTTAATGGTGGTGCTGAATTTCGGGTCATTGTTAATGGCTGCGGCAATTTCTTTCAGTGTATCCAGCGTGGCAGGCGCACCGTTAATCAGAGCGGTAATAGCGGCCTGAACAAACGCAGTAGTCGCAATCCGCggggag                                                       >  1:149964/1‑297 (MQ=255)                                                                                                                                                                                                                                 aTTAAAGTAGTTGGCATGGCGGCGGAGGGCCAGAAGAACGGAAGGCCAAAAGCTGGGGCACcttctcccaaaccaactgttatgaaaatgcagggataacgggcaactggcatcatctccggtttttattcagggggatgctcatgcttattggctatgtacgcgtgtcaacaaatgaccagaatacggaattgcagcgtaacgcgctggagtgcgcaggatgtgagctgattgttgaggacaaaatcagcggcacgaagtccgacaggccgggactgaaaaaactgctcaggacatta                                                     >  2:258969‑M2/1‑61 (MQ=255)                                                                                                                                                                                                                                  ttACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACCTTCTCCCAAACCAAGGTATGCGAGAAGACCAGCCACATCTTTTCCACTCAAATGAGTCAGCGTCTCATCCAGTGGTTGCTTACCTGACAGCGCATTGTTAATGGTGGTGCTGAATTTCGGGTCATTGTTAATGGCTGCGGCAATTTCTTTCAGTGTATCCAGCGTGGCAGGCGCACCGTTAATCAGAGCGGTAATAGCGGCCTGAACAAACGCAGTAGTCGCAATCCGCGTGGTGTTa                                                    <  1:378380/299‑1 (MQ=255)                                                                                                                                                                                                                                            tGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACCTTCTCCCAAACCAAGGTATGCGAGAAGACCAGCCACATCTTTTCCACTCAAATGAGTCAGCGTCTCATCCAGTGGTTGCTTACCTGACAGCGCATTGTTAATGGTGGTGCTGAATTTCGGGTCATTGTTAATGGCTGCGGCAATTTCTTTCAGTGTATCCAGCGTGGCAGGCGCACCGTTAATCAGAGCGGTAATAGCGGCCTGAACAAACGCAGTAGTCGCAATCCGCGTGGTGTTATTTCCTGCgg                                          >  1:233776/1‑299 (MQ=255)                                                                                                                                                                                                                                                                            cgCCAATAGCTGGAGCACcttctcccaaaccaacgtttatgaaaatgcagagataacgggcaactggcatcatctccggtttttattcagggggatgctcatgcttattggctatgtacgcgtgtcaacaaatgaccagaatacggaattgcagcgtaacgcgctggagtgcgcaggatgtgagctgatttttgaggacaaaatcagcggcacgaagtccgacaggccgggactgaaaaaactgctcaggacattatcggagggggatacactggtagtctggaagctggaccggctgg          <  1:540121‑M2/299‑282 (MQ=255)                                                                                                                                                                                                                                                                                   aGCTGGAGCACcttctcccaaaccaacgtttatgaaaatgcagagataacgggcaactggcatcatctccggtttttattcagggggatgctcatgcttattggctatgtacgcgtgtcaacaaatgaccagaatacggaattgcagcgtaacgcgctggagtgcgcaggatgtgagctgatttttgaggacaaaatcagcggcacgaagtccgacaggccgggactgaaaaaactgctcaggacattatcggagggggatacactggtagtctggaagctggaccggctggggcgtag   >  1:314262‑M2/1‑11 (MQ=255)                                                                                                                                                                                                                                                                                    gctgtggCACCCTCCCCCAAGCCAACGGACGCGAGAGTACCAGCCACAACTTTTCCCCGCGAATGTGTACTGGTCGCATCCATTGGTGCATTACCTGCCGGCGCCTTTTTAAGGGTGGGGCTGAATTTCGGGTCATTGTTAATGGCTGCGGCAATTTCTTTCAGTGTATCCAGCGTGGCAGGCGCACCGTTAATCAGAGCGGTAATAGCGGCCTGAACAAACGCAGTAGTCGCAATCCGCGTGGTGTTATTTCCTGCGTCAGGCGTCGGCGCTTTTGGTTCTCCGGTAAATGTCGGAtt  <  2:459617/293‑1 (MQ=255)                                                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                                                                  CTCCGCCTATATTCCCGGCAAACTGAGAAAAGTTTGTAGCTTCCTGCCAGCTTAATAATTCGCGACCACCATCTGCACCTCGCCCGTCATCCCAGACACGAATGAAATCACCGCGGGCTTCAGGTAATACCAGCGAAGGAAACACTTTCGCCAGCACAGGGTAATCAGAGGCAGAAAATTTCGCCCCGTTAAACTTCAAAAACACCATACTGGACCAGCTGTCGATTACAGTATTTGGCATTGCCGCGGAGGGCCAGAAGAACGGAACGCCAATAGCTGGAGCACCTTCTCCCAAACCAAGGTATGCGAGAAGACCAGCCACATCTTTTCCACTCAAATGAGTCAGCGTCTCATCCAGTGGTTGCTTACCTGACAGCGCATTGTTAATGGTGGTGCTGAATTTCGGGTCATTGTTAATGGCTGCGGCAATTTCTTTCAGTGTATCCAGCGTGGCAGGCGCACCGTTAATCAGAGCGGTAATAGCGGCCTGAACAAACGCAGTAGTCGCAATCCGCGTGGTGTTATTTCCTGCGGCAGGCGTCGGCGCTTTTGGTTCTCCGGTAAATGTCGGATT  >  CP006584/2255362‑2255935

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.