Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 702,352 Δ21 bp coding (380‑400/1149 nt) nagA ← N‑acetylglucosamine‑6‑phosphate deacetylase

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 702352 702372 21 20 [0] [0] 20 nagA N‑acetylglucosamine‑6‑phosphate deacetylase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 7023510 (0.000)20 (0.770) 17/296 0.4 100% coding (401/1149 nt) nagA N‑acetylglucosamine‑6‑phosphate deacetylase
?NC_000913 702373 = 0 (0.000)coding (379/1149 nt) nagA N‑acetylglucosamine‑6‑phosphate deacetylase

GTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTC  >  NC_000913/702235‑702520
                                                                                                                                          |                                                                                                                                                   
cttccgcaggaaccatttccggtgccagggtcactttggtaatgacgtcggcgttttcacacaggaaatcgaccagcgcggcatcaggcttacgcacaaaattcggattatgggtgcctttttttaccagattcagccCTAACGCCTGAtt                                                                                                                                         <  1:80147‑M2/13‑1 (MQ=255)
cttccgcaggaaccatttccggtgccagggtcactttggtaatgacgtcggcgttttcacacaggaaatcgaccagcgcggcatcaggcttacgcacaaaattcggattatgggtgcctttttttaccagattcagccCTAACGCCTGAtt                                                                                                                                         <  1:47141‑M2/13‑1 (MQ=255)
                            ggtcactttggtaatgacgtcggcgttttcacacaggaaatcgaccagcgcggcatcaggcttacgcacaaaattcggattatgggtgcctttttttaccagattcagccCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCAt                                                                                                              <  1:251948‑M2/40‑1 (MQ=255)
                                   ttggtaatgacgtcggcgttttcacacaggaaatcgaccagcgcggcatcaggcttacgcacaaaattcggattatgggtgcctttttttaccagattcagccCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCa                                                                                                      >  2:93242‑M2/104‑151 (MQ=255)
                                            acgtcggcgttttcacacaggaaatcgaccagcgcggcatcaggcttacgcacaaaattcggattatgggtgcctttttttaccagattcagccCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGtt                                                                                             <  1:376606‑M2/57‑1 (MQ=255)
                                                       ttcacacaggaaatcgaccagcgcggcatcaggcttacgcacaaaattcggattatgggtgcctttttttaccagattcagccCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCa                                                                                  >  1:272810‑M2/84‑151 (MQ=255)
                                                               ggaaatcgaccagcgcggcatcaggcttacgcacaaaattcggattatgggtgcctttttttaccagattcagccCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCtggt                                                                          >  2:66715‑M2/76‑151 (MQ=255)
                                                                            cgcggcatcaggcttacgcacaaaattcggattatgggtgcctttttttaccagattcagccCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGc                                                                <  1:362282‑M2/86‑1 (MQ=255)
                                                                            cgcggcatcaggcttacgcacaaaattcggattatgggtgcctttttttaccagattcagccCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCg                                                               <  1:303623‑M2/87‑1 (MQ=255)
                                                                                       gcttacgcacaaaattcggattatgggtgcctttttgtaccagattcagccCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGAtag                                                    <  1:184057‑M2/98‑1 (MQ=255)
                                                                                            cgcacaaaattcggattatgggtgcctttttttaccagattcagccCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTAc                                             <  1:77443‑M2/105‑1 (MQ=255)
                                                                                            cgcacaaaattcggattatgggtgcctttttttaccagattcagccCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTAc                                             <  1:165647‑M2/105‑1 (MQ=255)
                                                                                                caaaattcggattatgggtgcctttttttaccagattcagccCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGcc                                         <  1:63674‑M2/109‑1 (MQ=255)
                                                                                                         gattatgggtgcctttttttaccagattcagccCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTtct                                 >  1:22087‑M2/34‑150 (MQ=255)
                                                                                                                     ctttttttaccagattcagccCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTg                    <  1:162055‑M2/130‑1 (MQ=255)
                                                                                                                      tttttttaccagattcagccCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGc                   <  1:66965‑M2/131‑1 (MQ=255)
                                                                                                                      tttttttaccagattcagccCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGc                   <  1:98892‑M2/131‑1 (MQ=255)
                                                                                                                       ttttttaccagattcagccCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCa                  >  2:170772‑M2/20‑151 (MQ=255)
                                                                                                                                       gccCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGttt   >  1:344670‑M2/4‑150 (MQ=255)
                                                                                                                                        ccCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTc  <  2:240995‑M2/148‑1 (MQ=255)
                                                                                                                                          |                                                                                                                                                   
GTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTTCTGCATGATTTCCAGCGTTTC  >  NC_000913/702235‑702520

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.