| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 702,352 | Δ21 bp | coding (380‑400/1149 nt) | nagA ← | N‑acetylglucosamine‑6‑phosphate deacetylase |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 702352 | 702372 | 21 | 20 [0] | [0] 20 | nagA | N‑acetylglucosamine‑6‑phosphate deacetylase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 702351 | 0 (0.000) | 20 (0.770) | 17/296 | 0.4 | 100% | coding (401/1149 nt) | nagA | N‑acetylglucosamine‑6‑phosphate deacetylase |
| ? | NC_000913 | 702373 = | 0 (0.000) | coding (379/1149 nt) | nagA | N‑acetylglucosamine‑6‑phosphate deacetylase | |||||
CTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTT > NC_000913/702214‑702499 | cTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgatt < 1:80147‑M1/151‑14 (MQ=255)cTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgatt < 1:47141‑M1/151‑14 (MQ=255) ggTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcat < 1:251948‑M1/150‑41 (MQ=255) ttGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgca > 2:93242‑M1/1‑103 (MQ=255) aCGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccctgtt < 1:376606‑M1/151‑58 (MQ=255) ttCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccctgtttcatcagctca > 1:272810‑M1/1‑83 (MQ=255) ggAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccctgtttcatcagctcatcgctggt > 2:66715‑M1/1‑75 (MQ=255) cgcgGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccctgtttcatcagctcatcgctggtggtgataagcg < 1:303623‑M1/149‑88 (MQ=255) cgcgGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccctgtttcatcagctcatcgctggtggtgataagc < 1:362282‑M1/148‑87 (MQ=255) gCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTGTACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccctgtttcatcagctcatcgctggtggtgataagcgtcggcagatag < 1:184057‑M1/149‑99 (MQ=255) cGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccctgtttcatcagctcatcgctggtggtgataagcgtcggcagatagttagtac < 1:77443‑M1/151‑106 (MQ=255) cGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccctgtttcatcagctcatcgctggtggtgataagcgtcggcagatagttagtac < 1:165647‑M1/151‑106 (MQ=255) caAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccctgtttcatcagctcatcgctggtggtgataagcgtcggcagatagttagtacagcc < 1:63674‑M1/151‑110 (MQ=255) gATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccctgtttcatcagctcatcgctggtggtgataagcgtcggcagatagttagtacagcctgatttct > 1:22087‑M1/1‑33 (MQ=255) cTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccctgtttcatcagctcatcgctggtggtgataagcgtcggcagatagttagtacagcctgatttctcattggctttctg < 1:162055‑M1/151‑131 (MQ=255) tttttttACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccctgtttcatcagctcatcgctggtggtgataagcgtcggcagatagttagtacagcctgatttctcattggctttctgc < 1:66965‑M1/151‑132 (MQ=255) tttttttACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccctgtttcatcagctcatcgctggtggtgataagcgtcggcagatagttagtacagcctgatttctcattggctttctgc < 1:98892‑M1/151‑132 (MQ=255) ttttttACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccctgtttcatcagctcatcgctggtggtgataagcgtcggcagatagttagtacagcctgatttctcattggctttctgca > 2:170772‑M1/1‑19 (MQ=255) gCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccctgtttcatcagctcatcgctggtggtgataagcgtcggcagatagttagtacagcctgatttctcattggctttctgcatgatttccagcgttt > 1:344670‑M1/1‑3 (MQ=255) ccctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccctgtttcatcagctcatcgctggtggtgataagcgtcggcagatagttagtacagcctgatttctcattggctttctgcatgatttccagcgtttc < 2:240995‑M1/150‑149 (MQ=255) | CTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGGTGATAAGCGTCGGCAGATAGTTAGTACAGCCTGATTTCTCATTGGCTTT > NC_000913/702214‑702499 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |