New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4481898	15 (0.570)	3 (0.120)	3/282	2.9	17.5%	coding (1940/2856 nt)	valS	valyl‑tRNA synthetase
	?	NC_000913	= 4481970	14 (0.560)					coding (1868/2856 nt)	valS	valyl‑tRNA synthetase
Rejected: Frequency below cutoff threshold.

ATTTCGCCGCCGTTGAAGCCGCAATCCTGACCTTCTGTGTTCATCAGCACAAAGCGGCTGGCGTTCCACAGCTTGTTACAGAAGTTACGGTAACCTTCCAGACGCTTCATATCCCAGTTGATGTCACGACCGGTAGACGCCAGCGCCGCCAGGGTGAAGCGCAGCGCGTCAGTACCGTGCGGCTCAATACCGTTCGGGAACTGCTTCTCGGTGCGCTTACGGATTTTGTCCGCCAGCTGCGGCTGCATCATATTGCCGGTACGTTTTTCCAGCAGTTCTGGCA  >  NC_000913/4481835‑4482117                                                                                                                                        |                                                                                                                                                    aTTTCGCCGCCGTTGAAGCCGCAATCCTGACCTTCTGTGTTCATCAGCACAAAGCGGCGGGCGTTCCACAGCTTGTTACAGAAGTTACGGGAACCTTCCAGACGCTTCATATCCCAGTTGATGTCACGACCGGTAGacgccagccgctttg                                                                                                                                      >  2:43783‑M2/1‑136 (MQ=255)                        aTCCTGACCTTCTGTGTTCATCAGCACAAAGCGGCTGGCGTTCCACAGCTTGTTACAGAAGTTACGGTAACCTTCCAGACGCTTCATATCCCAGTTGATGTCACGACCGGTAGACGCCAGCGCCGCCAGGGTGAAGCGCAGCGCGTCAGTa                                                                                                               >  1:288605/1‑151 (MQ=255)                        aTCCTGACCTTCTGTGTTCATCAGCACAAAGCGGCTGGCGTTCCACAGCTTGTTACAGAAGTTACGGTAACCTTCCAGACGCTTCATATCCCAGTTGATGTCACGACCGGTAGACGCCAGCGCCGCCAGGGTGAAGCGCAGCGCGTCAGTa                                                                                                               >  1:327816/1‑151 (MQ=255)                          ccTGACCTTCTGTGTTCATCAGCACAAAGCGGCTGGCGTTCCACAGCTTGTTACAGAAGTTACGGTAACCTTCCAGACGCTTCATATCCCAGTTGATGTCACGACCGGTAGACTCCAGCGCCGCCAGGGTGAAGCGCAGCGCGTCAGTAc                                                                                                              >  2:88810/1‑150 (MQ=255)                                  tCTGTGTTCATCAGCACAAAGCGGCTGGCGTTCCACAGCTTGTTACAGAAGTTACGGTAAACTTCCAGACCCTTCATATCCCAGTTGCTGTCACGACCGGTAGACGCCAGCGCCGCCAGGGTGAAGCGCAGCGCGTCAGTACCGTGCgg                                                                                                       >  2:271072/1‑149 (MQ=255)                                   cTGTGTTCATCAGCACAAAGCGGCTGGCGTTCCACAGCTTGTTACAGAAGTTACGGTAACCTTCCAGACGCTTCATATCCCAGTTGATGTCACGACCGGTAGACGCCAGCGCCGCCAGGGTGAAGCGCAGCGCGTCAGTACCGTGCGGCt                                                                                                     >  2:18682/1‑150 (MQ=255)                                               gaacaAAGCGGCTGGCGTTCCACAGCTTGTTACAGAAGTTACGGTAACCTTCCAGACGCTTCATATCCCAGTTGATGTCACGACCGGTAGACGCCAGCGCCGCCAGGGTGAAGCGCAGCGCGTCAGTACCGTGCGGCTCAATACCGTTCgg                                                                                        >  2:55614/3‑151 (MQ=255)                                                             gCGTGCAACAGGTTGTTAAGAAAGTTACGGTAACCTTCCTGACGCATCATATCGCAGTTGAGGTCACGACCGGTAGacgccagccgctttgtgctgatgaacacagaaggtgaggattgcggcttcaacggcggcgaaatgacgctgtcg                                                                           >  1:220242‑M2/1‑76 (MQ=255)                                                              cGTTCCACAGCTTGTTACAGAAGTTACGGTAACCTTCCAGACGCTTCATATCCCAGTTGATGTCACGACCGGTAGACGCCAGCGCCGCCAGGGTGAAGCGCAGCGCGTCAGTACCGTGCGGCTCAATACCGTTCGGGAACTGCTTCTCgg                                                                          <  1:55608/150‑1 (MQ=255)                                                              cGTTCCAAAGCTTGTTACAGAAGTTACGGTAACCTTCCAGACGCTTCATATCCCAGTTGATGTCACGACCGGTAGACGCCAGCGCCGCCAGGGTGAAGCGCAGCGCGTCAGTACCGTGCGGCTCAATACCGTTCGGGAACTGCTTCTCgg                                                                          <  2:10114/150‑1 (MQ=255)                                                                       gCTTGTTACAGAAGTTACGGTAACCTTCCAGACGCTTCATATCCCAGTTGATGTCACGACCGGTAGACGCCAGCGCCGCCAGGGTGAAGCGCAGCGCGTCAGTACCGTGCGGCTCAATACCGTTCGGGAACTGCTTCTCGGTGCGCTTACg                                                                >  2:49952/1‑151 (MQ=255)                                                                                  aaGTTACGGTAACCTTCCAGACGCTTCATATCCCAGTTGATGTCAGGACCGGTAGccgccagccgctttgtgctgatgaacacagaaggtcaggattgcggcttcaacggcggcgaaatgacgctgtcgctggcggaccgctggattc                                                        >  2:232655‑M2/1‑55 (MQ=255)                                                                                                         cTTCATATCCCAGTTGATGTCACGACCGGTAGACGCCAGCGCCGCCAGGGTGAAGCGCAGCGCGTCAGTACCGTGCGGCTCAATACCGTTCGGGAACTGCTTCTCGGTGCGCTTACGGATTTTGTCCGCAAGCTGCGGCTGCATCATATTg                              >  1:293399/1‑151 (MQ=255)                                                                                                          ttCATATCCCAGTTGATGTCACGACCGGTAGACGCCAGCGCCGCCAGGGTGAAGCGCAGCGCGTCAGTACCGTGCGGCTCAATACCGTTCGGGAACTGCTTCTCGGTGCGCTTACGGATTTTGTCCGCCAGCTGCGGCTGCATCATATTGc                             <  1:273983/151‑1 (MQ=255)                                                                                                                         aTGTCACGACCGGTAGACGCCAGCGCCGCCAGTGTGAAGCGCAGCGCGTCAGTACCGTGCGGCTCAATACCGTTCGGGAACTGCTTCTCTGTGCGCTTACTGATTTTGTCCGCCAGCTGCGGCTGCATCATATTGCCGGTACGTTTTTcc               <  2:363390/150‑1 (MQ=255)                                                                                                                                     gTAGACGCCAGCGCCGCCAGGGTGAAGCGCAGCGCGTCAGTACCGTGCGGCTCAATACCGTTCGGGAACTGCTTCTCGGTGCGCTTACGGATTTTGTCCGCCAGCTGCGGCTGCATCATATTGCCGGTACGTTTTTTCAGCAGTTCTGGCa  >  1:323050/1‑151 (MQ=255)                                                                                                                                     gTAGACGCCAGCGCCGCCAGGGTAAAGCGCAGCGCGTCAGTACCGTGCGGCTCAATACCGTTCGGGAACTGCTTCTCGGTGCGCTTACGGATTTTGTCCGCCAGCTGCGGCTGCATCATATTGCCGGTACGTTTTTCCAGCAGTTCTGGCa  >  1:270502/1‑151 (MQ=255)                                                                                                                                        |                                                                                                                                                    ATTTCGCCGCCGTTGAAGCCGCAATCCTGACCTTCTGTGTTCATCAGCACAAAGCGGCTGGCGTTCCACAGCTTGTTACAGAAGTTACGGTAACCTTCCAGACGCTTCATATCCCAGTTGATGTCACGACCGGTAGACGCCAGCGCCGCCAGGGTGAAGCGCAGCGCGTCAGTACCGTGCGGCTCAATACCGTTCGGGAACTGCTTCTCGGTGCGCTTACGGATTTTGTCCGCCAGCTGCGGCTGCATCATATTGCCGGTACGTTTTTCCAGCAGTTCTGGCA  >  NC_000913/4481835‑4482117

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.