New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3160836 =	34 (1.090)	3 (0.100)	3/208	3.1	7.7%	coding (311/2220 nt)	ygiQ	Radical SAM superfamily protein
	?	NC_000913	3160864 =	39 (1.300)					coding (283/2220 nt)	ygiQ	Radical SAM superfamily protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CGCGATCCGGGCGCTTACCCGCGACGTTATCCGGCGTGTAGGCATCGTCATGACGTAAACGGCGATCGGCGGTATAACGGTTGATCATCGAATCCATGTTGCCAGCAGTAACACCGAAAAACAGATTCGGTTTACCCAGACGCATAAAGTCGTCTTTGCTGCTCCAGTCCGGCTGGGCGATGATCCCGACGCGAAAGCCCTGCGCTTCCAGCATACGACCGCAAATCGCCATCCCGAAGCTTGGGTGATCGACATACGCGTCGCCAGTAACCAA  >  NC_000913/3160729‑3161002                                                                                                                                        |                                                                                                                                           cgcgATCCGGGCGCTTACCCGCGACGTTATCCGGCGTGTAGGCATCGTCATGACGTAAACGGCGATCGGCGGTATAACGGTTGATCATCGAATCCATGTTGCCAGCAGTAACACCGAAAAACAGATTCGGTTTACCCAg                                                                                                                                         <  1:97353/139‑1 (MQ=255)                tACCCGCGACGTTATCCGGCGTGTAGGCATCGTCATGACGTAAACGGCGATCGGCGGTATAACGGTTGATCATCGAATCCATGTTGCCAGCAGTAACACCGAAAAACAGATTCGGTTTACCCAGACGCATAAAgtcgtc                                                                                                                          >  2:574033/1‑139 (MQ=255)                tACCCGCGACGTTATCCGGCGTGTAGGCATCGTCATGACGTAAACGGCGATCGGCGGTATAACGGTTGATCATCGAATCCATGTTGCCAGCAGTAACACCGAAAAACAGATTCGGTTTACCCAGACGCATAAAgtcgtc                                                                                                                          >  1:306404/1‑139 (MQ=255)                    cgcgACGTTATCCGGCGTGTAGGCATCGTCATGACGTAAACGGCGATCGGCGGTATAACGGTTGATCATCGAATCCATGTTGCCAGCAGTAACACCGAAAAACAGATTCGGTTTACCCAGACGCATAAAGTCGTCTTtg                                                                                                                      <  2:306404/139‑1 (MQ=255)                     gcgACGTTATCCGGCGTGTAGGCATCGTCATGACGTAAACGGCGATCGGCGGTATAACGGTTGATCATCGAATCCATGTTGCCAGCAGTAACACCGAAAAACAGATTCGGTTTACCCAGACGCATAAAGTCGTCTTtgc                                                                                                                     >  1:380860/1‑139 (MQ=255)                                       tAGGCATCGTCATGACGTAAACGGCGATCGGCGGTATAACGGTTGATCATCGAATCCATGTTGCCAGCAGTAACACCGAAAAACAGATTCGGTTTACCCAGACGCATAAAGTCGTCTTTGCTGCTCCAGTCCGGCTggg                                                                                                   >  2:476668/1‑139 (MQ=255)                                          gCATCGTCATGACGTAAACGGCGATCGGCGGTATAACGGTTGATCATCGAATCCATGTTGCCAGCAGTAACACCGAAAAACAGATTCGGTTTACCCAGACGCATAAAGTCGTCTTTGCTGCTCCAGTCCGGCTGGGCga                                                                                                <  2:380860/139‑1 (MQ=255)                                              cGTCATGACGTAAACGGCGATCGGCGGTATAACGGTTGATCATCGAATCCATGTTGCCAGCAGTAACACCGAAAAACAGATTCGGTTTACCCAGACGCATAAAGTCGTCTTTGCTGCTCCAGTCCGGCTGGGCgatgat                                                                                            <  1:574033/139‑1 (MQ=255)                                                          aaCGGCGATCGGCGGTATAACGGTTGATCATCGAATCCATGTTGCCAGCAGTAACACCGAAAAACAGATTCGGTTTACCCAGACGCATAAAGTCGTCTTtgctg                                                                                                                   >  2:529221/1‑104 (MQ=255)                                                          aaCGGCGATCGGCGGTATAACGGTTGATCATCGAATCCATGTTGCCAGCAGTAACACCGAAAAACAGATTCGGTTTACCCAGACGCATAAAGTCGTCTTtgctg                                                                                                                   <  1:529221/104‑1 (MQ=255)                                                          aaCGGCGATCGGCGGTATAACGGTTGATCATCGAATCCATGTTGCCAGCAGTAACACCGAAAAACAGATTCGGTTTACCCAGACGCATAAAGTCGTCTTtg                                                                                                                      <  2:42257/101‑1 (MQ=255)                                                          aaCGGCGATCGGCGGTATAACGGTTGATCATCGAATCCATGTTGCCAGCAGTAACACCGAAAAACAGATTCGGTTTACCCAGACGCATAAAGTCGTCTTtg                                                                                                                      >  1:42257/1‑101 (MQ=255)                                                          aaCGGCGATCGGCGGTATAACGGTTGATCATCGAATCCATGTTGCCAGCAGTAACACCGAAAAACAGATTCGGTTTACCCAGACGCATAAAGTCGTCTTTGCTGCTCCAGTCCGGCTGGGCGATGATCCCGACGCGaaa                                                                                >  1:50595/1‑139 (MQ=255)                                                                 aTCGGCGGTATAACGGTTGATCATCGAATCCATGTTGCCAGCAGTAACACCGAAAAACAGATTCGGTTTAcc                                                                                                                                            <  1:70073/72‑1 (MQ=255)                                                                 aTCGGCGGTATAACGGTTGATCATCGAATCCATGTTGCCAGCAGTAACACCGAAAAACAGATTCGGTTTAcc                                                                                                                                            >  2:70073/1‑72 (MQ=255)                                                                  tCGGCGGTATAACGGTTGATCATCGAATCCATGTTGCCAGCAGTAACACCGAAAAACAGATTCGGTTTACCCAGACGCATAAAGTCGTCTTTGCTGCTCCAGTCCGGCTGGGCGATGATCCCGACGCGAAAGCCCTgcg                                                                        <  2:50595/139‑1 (MQ=255)                                                                                   gATCATCGAATCCATGTTGCCAGCAGTAACACCGAAAAACAGATTCGGTTTACCCAGACGCATAAAGTCGTCTTTGCTGCTCCAGTCCGGCTGGGCGATGATCCCGACGCGAAAGCCCTg                                                                          >  1:72015/1‑120 (MQ=255)                                                                                   gATCATCGAATCCATGTTGCCAGCAGTAACACCGAAAAACAGATTCGGTTTACCCAGACGCATAAAGTCGTCTTTGCTGCTCCAGTCCGGCTGGGCGATGATCCCGACGCGAAAGCCCTg                                                                          <  2:72015/120‑1 (MQ=255)                                                                                   gATCATCGAATCCATGTTGCCAGCAGTAACACCGAAAAACAGATTCGGTTTACCCAGACGCATAAAGTCGTCTTTGCTGCTCCAGTCCGGCTGGGCGATGATCCCGACGCGAAAGCCCTGCGCTTCCAGCATACGACCg                                                       >  1:126413/1‑139 (MQ=255)                                                                                   gATCATCGAATCCATGTTGCCAGCAGTAACACCGAAAAACAGATTCGGTTTACCCAGACGCATAAAGTCGTCTTTGCTGCTCCAGTCCGGCTGGGCGATGATCCCGACGCGAAAGCCCTGCGCTTCCAGCATACGACCg                                                       >  1:572074/1‑139 (MQ=255)                                                                                      catcGAATCCATGTTGCCAGCAGTAACACCGAAAAACAGATTCGGTTTACCCAGACGCATAAAGTCGTCTTtg                                                                                                                      <  1:222718/73‑1 (MQ=255)                                                                                      catcGAATCCATGTTGCCAGCAGTAACACCGAAAAACAGATTCGGTTTACCCAGACGCATAAAGTCGTCTTtg                                                                                                                      >  2:222718/1‑73 (MQ=255)                                                                                         cGAATCCATGTTGCCAGCAGTAACACCGAAAAACAGATTCGGTTTACCCAGACGCATAAAGTCGTCTTTGCTGCTCCAGTCCGGCTGGGCGATGATCCCGACGCGAAAGCCCTGCGCTTCCAGCATACGACCGCAAATc                                                 >  2:256516/1‑139 (MQ=255)                                                                                           aaTCCATGTTGCCAGCAGTAACACCGAAAAACAGATTCGGTTTACCCAGACGCATAAAGTCGTCTTTGCTGCTCCAGTCCGGCTGGGCGATGATCCCGACGCGAAAGCCCTGCGCTTCCAGCATACGACCGCAAATCGc                                               >  2:193049/1‑139 (MQ=255)                                                                                               cATGTTGCCAGCAGTAACACCGAAAAACAGATTCGGTTTACCCAGACGCATAAAGTCGTCTTTGCTGCTCCAGTCCGGCTGGGCGATGATCCCGACGCGAAAGCCCTGCGCTTCCAGCATACGACCGCAAATCGCCATc                                           >  1:287998/1‑139 (MQ=255)                                                                                                 tGTTGCCAGCAGTAACACCGAAAAACAGATTCGGTTTACCCAGACGCATAAAGTCGTCTTTGCTGCTCCAGTCCGGCTGGGCGATGATCCCGACGCGAAAGCCCTGCGCTTCCAGCATACGACCGCAAATCGCCATccc                                         >  1:598229/1‑139 (MQ=255)                                                                                                      ccAGCAGTAACACCGAAAAACAGATTCGGTTTACCCAGACGCATAAAGTCGTCTTTGCTGCTCCAGTCCGGCTGGGCGATGATCCCGACGCGAAAGCCCTGCGCTTCCAGCATACGACCGCAAATCGCCATccc                                         >  1:590803/1‑134 (MQ=255)                                                                                                      ccAGCAGTAACACCGAAAAACAGATTCGGTTTACCCAGACGCATAAAGTCGTCTTTGCTGCTCCAGTCCGGCTGGGCGATGATCCCGACGCGAAAGCCCTGCGCTTCCAGCATACGACCGCAAATCGCCATccc                                         <  2:590803/134‑1 (MQ=255)                                                                                                           agTAACACCGAAAAACAGATTCGGTTTACCCAGACGCATAAAGTCGTCTTTGCTGCTCCAGTCCGGCTGGGCGATGATCCCGACGCGAAAGCCCTGCGCTTCCAGCATACGACCGCAAATCGCCATCCCGAAGCTTggg                               <  2:126413/139‑1 (MQ=255)                                                                                                             tAACACCGAAAAACAGATTCGGTTTACCCAGACGCATAAAGTCGTCTTTGCTGCTCCAGTCCGGCTGGGCGATGATCCCGACGCGAAAGCCCTGCGCTTCCAGCATACGACCGCAAATCGCCATCCCGAAGCtt                                  >  2:321244/1‑134 (MQ=255)                                                                                                             tAACACCGAAAAACAGATTCGGTTTACCCAGACGCATAAAGTCGTCTTTGCTGCTCCAGTCCGGCTGGGCGATGATCCCGACGCGAAAGCCCTGCGCTTCCAGCATACGACCGCAAATCGCCATCCCGAAGCtt                                  <  1:321244/134‑1 (MQ=255)                                                                                                               acacCGAAAAACAGATTCGGTTTACCCAGACGCATAAAGTCGTCTTTGCTGCTCCAGTCCGGCTGGGCGATGATCCCGACGCGAAAGCCCTGCGCTTCCAGCATACGACCGCAAATCGCCATCCCGAAGCTTGGGTGAt                           <  2:538795/139‑1 (MQ=255)                                                                                                                     aaaaaCAGATTCGGTTTACCCAGACGCATAAAGTCGTCTTTGCTGCTCCAGTCCGGCTGGGCGATGATCCCGACGCGAAAGCCCTGCGCTTCCAGCATACGACCGCAAATCGCCATCCCGAAGc                                    >  2:281677/1‑124 (MQ=255)                                                                                                                     aaaaaCAGATTCGGTTTACCCAGACGCATAAAGTCGTCTTTGCTGCTCCAGTCCGGCTGGGCGATGATCCCGACGCGAAAGCCCTGCGCTTCCAGCATACGACCGCAAATCGCCATCCCGAAGc                                    <  1:281677/124‑1 (MQ=255)                                                                                                                      atctgtttttCGGTTTACCCAGACGCATAAAGTCGTCTTTGCTGCTCCAGTCCGGCTGGGCGATGATCCCGACGCGAAAGCCCTGCGCTTCCAGCATACGACCGCAAATCGCCATCCCGAAGCTTGGGTGATCGACATa                    >  2:683773/9‑139 (MQ=255)                                                                                                                          gtttttCGGTTTACCCAGACGCATAAAGTCGTCTTTGCTGCTCCAGTCCGGCTGGGCGATGATCCCGACGCGAAAGCCCTGCGCTTCCAGCATACGACCGCAAATCGCCATCCCGAAGCTTGGGTGATCGACATAcgcg                <  1:683773/135‑1 (MQ=255)                                                                                                                            gATTCGGTTTACCCAGACGCATAAAGTCGTCTTTGCTGCTCCAGTCCGGCTGGGCGATGATCCCGACGCGAAAGCCCTGCGCTTCCAGCATACGACCGCAAATCGCCATCCCGAAGCTTGGGTGATCGACATACGCGTc              >  1:153077/1‑139 (MQ=255)                                                                                                                                cGGTTTACCCAGACGCATAAAGTCGTCTTTGCTGCTCCAGTCCGGCTGGGCGATGATCCCGACGCGAAAGCCCTGCGCTTCCAGCATACGACCGCAAATCGCCATCCCGAAGCTTGGGTGATCGACATACGCGTCGCCa          <  2:287998/139‑1 (MQ=255)                                                                                                                                 ggTTTACCCAGACGCATAAAGTCGTCTTTGCTGCTCCAGTCCGGCTGGGCGATGATCCCGACGCGAAAGCCCTGCGCTTCCAGCATACGACCGCAAATCGCCATCCCGAAGCTTGGGTGATCGACATACGCGTCGCCAg         <  1:370971/139‑1 (MQ=255)                                                                                                                                  gTTTACCCAGACGCATAAAGTCGTCTTTGCTGCTCCAGTCCGGCTGGGCGATGATCCCGACGCGAAAGCCCTGCGCTTCCAGCATACGACCGCAAATCGCCATCCCGAAGCTTGGGTGATCGACATACGCGTCGCCAGt        <  1:476668/139‑1 (MQ=255)                                                                                                                                        ccAGACGCATAAAGTCGTCTTTGCTGCTCCAGTCCGGCTGGGCGATGATCCCGACGCGAAAGCCCTGCGCTTCCAGCATACGACCGCAAATCGCCATCCCGAAGCTTGGGTGATCGACATACGCGTCGCCAGTAACCaa  <  2:598229/139‑1 (MQ=255)                                                                                                                                        |                                                                                                                                           CGCGATCCGGGCGCTTACCCGCGACGTTATCCGGCGTGTAGGCATCGTCATGACGTAAACGGCGATCGGCGGTATAACGGTTGATCATCGAATCCATGTTGCCAGCAGTAACACCGAAAAACAGATTCGGTTTACCCAGACGCATAAAGTCGTCTTTGCTGCTCCAGTCCGGCTGGGCGATGATCCCGACGCGAAAGCCCTGCGCTTCCAGCATACGACCGCAAATCGCCATCCCGAAGCTTGGGTGATCGACATACGCGTCGCCAGTAACCAA  >  NC_000913/3160729‑3161002

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.