New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4097100 =	65 (0.900)	3 (0.040)	3/204	6.6	4.6%	coding (349/1470 nt)	rhaB	rhamnulokinase
	?	NC_000913	= 4097096	63 (0.940)					coding (353/1470 nt)	rhaB	rhamnulokinase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TAATCCGGCATCAGCAGAGCGTGAGCAATGTGTGGAATAAGTTCAGGTTGTTGCTCCGTCAGCGCACGCAACTGATAAAGCGTATTGAAGGGCAGAAACTGGATGCCGCTACGTTGATAAATATCGCGTTTGCCGAGTTGTTGTTGTGCCTGCGCCATTAGGCCATTGGTGCGGCTATCGCGATAAGCAACGGGCAGGCCCACACGCTGACCCTGTTGGTCGAGCAGCACAAAGTCCACGCCCCAGGTATCAATCCCAATGCTATCGATA  >  NC_000913/4096961‑4097230                                                                                                                                        |                                                                                                                                       tAATCCGGCATCAGCAGAGCGTGAGCAATGTGTGGAATAAGTTCAGGTTGTTGCTCCGTCAGCGCACGCAACTGATAAAGCGTATTGAAGGGCAGAAACTGGATGCCGCTACGTTGATAAATATCGCGTTTGCCGAgtt                                                                                                                                     <  2:1476327/139‑1 (MQ=255) tAATCCGGCATCAGCAGAGCGTGAGCAATGTGTGGAATAAGTTCAGGTTGTTGCTCCGTCAGCGCACGCAACTGATAAAGCGTATTGAAGGGCAGAAACTGGATGCCGCTACGTTGATAAATATCGCGTTTGCCGAgtt                                                                                                                                     <  1:581218/139‑1 (MQ=255)   aTCCGGCATCAGCAGAGCGTGAGCAATGTGTGGAATAAGTTCAGGTTGTTGCTCCGTCAGCGCACGCAACTGATAAAGCGTATTGAAGGGCAGAAACTGGATGCCGCTACGTTGATAAATATCGCGTCTGCCGAgttgt                                                                                                                                   >  2:1192978/1‑139 (MQ=255)    tCCGGCATCAGCAGAGCGTGAGCAATGTGTGGAATAAGTTCAGGTTGTTGCTCCGTCAGCGCACGCAACTGATAAAGCGTATTGAAGGGCAGAAACTGGATGCCGCTACGTTGATAAATATCGCGTTTGCCGAgttgtt                                                                                                                                  >  2:10115/1‑139 (MQ=255)        gCATCAGCAGAGCGTGAGCAATGTGTGGAATAAGTTCAGGTTGTTGCTCCGTCAGCGCACGCAACTGATAAAGCGTATTGAAGGGCAGAAACTGGATGCCGCTACGTTGATAAATATCGCGTTTGCCGAGttgttgttg                                                                                                                              <  2:1131714/139‑1 (MQ=255)        gCATCAGCAGAGCGTGAGCAATGTGTGGAATAAGTTCAGGTTGTTGCTCCGTCAGCGCACGCAACTGATAAAGCGTATTGAAGGGCAGAAACTGGATGCCGCTACGTTGATAAATATCGCGTTTGCCGAGttgttgttg                                                                                                                              >  2:856360/1‑139 (MQ=255)        gCATCAGCAGAGCGTGAGCAATGTGTGGAATAAGTTCAGGTTGTTGCTCCGTCAGCGCACGCAACTGATAAAGCGTATTGAAGGGCAGAAACTGGATGCCGCTACGTTGATAAATATCGCGTTTGCCGAGttgttgttg                                                                                                                              >  1:677117/1‑139 (MQ=255)         cATCAGCAGAGCGTGAGCAATGTGTGGAATAAGTTCAGGTTGTTGCTCCGTCAGCGCACGCAACTGATAAAGCGTATTGAAGGGCAGAAACTGGATGCCGCTACGTTGATAAATATCGCGTTTGCCGAGTtgttgttgt                                                                                                                             >  1:835300/1‑139 (MQ=255)              gcagAGCGTGAGCAATGTGTGGAATAAGTTCAGGTTGTTGCTCCGTCAGCGCACGCAACTGATAAAGCGTATTGAAGGGCAGAAACTGGATGCCGCTACGTTGATAAATATCGCGTTTGCCGAGTTGTTGTTGTGCCTg                                                                                                                        <  1:10115/139‑1 (MQ=255)              gcagAGCGTGAGCAATGTGTGGAATAAGTTCAGGTTGTTGCTCCGTCAGCGCACGCAACTGATAAAGCGTATTGAAGGGCAGAAACTGGATGCCGCTACGTTGATAAATATCGCGTTTGCCGAGTTGTTGTTGTGCCTg                                                                                                                        <  2:695325/139‑1 (MQ=255)                                 tgGAATAAGTTCAGGTTGTTGCTCCGTCAGCGCACGCAACTGATAAAGCGTATTGAAGGGCAGAAACTGGATGCCGCTACGTTGATAAATATCGCGTTTGCCGAGTTGTTGTTGTGCCTGCGCCATTAGGCCATTGGTg                                                                                                     >  2:141988/1‑139 (MQ=255)                                   gAATAAGTTCAGGTTGTTGCTCCGTCAGCGCACGCAACTGATAAAGCGTATTGAAGGGCAGAAACTGGATGCCGCTACGTTGATAAATATCGCGTTTGCCGAGTTGTTGTTGTGCCTGCGCCATTAGGCCATTGGTGCg                                                                                                   <  2:835300/139‑1 (MQ=255)                                     aTAAGTTCAGGTTGTTGCTCCGTCAGCGCACGCAACTGATAAAGCGTATTGAAGGGCAGAAACTGGATGCCGCTACGTTGATAAATATCGCGTTTGCCGAGTTGTTGTTGTGCCTGCGCCATTAGGCCATTGGTGCGGc                                                                                                 >  2:690587/1‑139 (MQ=255)                                       aaGTTCAGGTTGTTGCTCCGTCAGCGCACGCAACTGATAAAGCGTATTGAAGGGCAGAAACTGGATGCCGCTACGTTGATAAATATCGCGTTTGCCGAGTTGTTGTTGTGCCTGCGCCATTAGGCCATTGGTGCGGCTa                                                                                               >  2:180522/1‑139 (MQ=255)                                       aaGTTCAGGTTGTTGCTCCGTCAGCGCACGCAACTGATAAAGCGTATTGAAGGGCAGAAACTGGATGCCGCTACGTTGATAAATATCGCGTTTGCCGAGTTGTTGTTGTGCCTGCGCCATTAGGCCATTGGTGCGGCTa                                                                                               <  1:180522/139‑1 (MQ=255)                                         gTTCAGGTTGTTGCTCCGTCAGCGCACGCAACTGATAAAGCGTATTGAAGGGCAGAAACTGGATGCCGCTACGTTGATAAATATCGCGTTTGCCGAGTTGTTGTTGTGCCTGCGCCATTAGGCCATTGGTGCGGCTATc                                                                                             >  2:61265/1‑139 (MQ=255)                                           tCAGGTTGTTGCTCCGTCAGCGCACGCAACTGATAAAGCGTATTGAAGGGCAGAAACTGGATGCCGCTACGTTGATAAATATCGCGTTTGCCGAGttgttgttg                                                                                                                              <  1:1524867/104‑1 (MQ=255)                                           tCAGGTTGTTGCTCCGTCAGCGCACGCAACTGATAAAGCGTATTGAAGGGCAGAAACTGGATGCCGCTACGTTGATAAATATCGCGTTTGCCGAGttgttgttg                                                                                                                              >  2:1524867/1‑104 (MQ=255)                                           tCAGGTTGTTGCTCCGTCAGCGCACGCAACTGATAAAGCGTATTGAAGGGCAGAAACTGGATGCCGCTACGTTGATAAATATCGCGTTTGCCGAGTTGTTGTTGTGCCTGCGCCATTAGGCCATTGGTGCGGCTATcgc                                                                                           >  2:739447/1‑139 (MQ=255)                                             aGGTTGTTGCTCCGTCAGCGCACGCAACTGATAAAGCGTATTGAAGGGCAGAAACTGGATGCCGCTACGTTGATAAATATCGCGTTTGCCGAGTTGTTGTTGTGCCTGCGCCATTAGGCCATTGGTg                                                                                                     >  2:186863/1‑127 (MQ=255)                                             aGGTTGTTGCTCCGTCAGCGCACGCAACTGATAAAGCGTATTGAAGGGCAGAAACTGGATGCCGCTACGTTGATAAATATCGCGTTTGCCGAGTTGTTGTTGTGCCTGCGCCATTAGGCCATTGGTg                                                                                                     <  1:186863/127‑1 (MQ=255)                                             aGGTTGTTGCTCCGTCAGCGCACGCAACTGATAAAGCGTATTGAAGGGCAGAAACTGGATGCCGCTACGTTGATAAATATCGCGTTTGCCGAGTTGTTGTTGTGCCTGCGCCATTAGGCCATTGGTGCGGCTATCGCGa                                                                                         >  2:1384503/1‑139 (MQ=255)                                              ggTTGTTGCTCCGTCAGCGCACGCAACTGATAAAGCGTATTGAAGGGCAGAAACTGGATGCCGCTACGTTGATAAATATCGCGTTTGCCGAGTTGTTGTTGTGCCTGCGCCATTAGGCCATTGGTGCGGCTATCGCGAt                                                                                        >  2:513097/1‑139 (MQ=255)                                              ggTTGTTGCTCCGTCAGCGCACGCAACTGATAAAGCGTATTGAAGGGCAGAAACTGGATGCCGCTACGTTGATAAATATCGCGTTTGCCGAGTTGTTGTTGTGCCTGCGCCATTAGGCCATTGGTGCGGCTATCGCGAt                                                                                        >  2:553422/1‑139 (MQ=255)                                                    tgCTCCGTCAGCGCACGCAACTGATAAAGCGTATTGAAGGGCAGAAACTGGATGCCGCTACGTTGATAAATATCGCGTTTGCCGAGTTGTTGTTGTGCCTGCGCCATTAGGCCATTGGTGCGGCTATCGCGATAAGCaa                                                                                  >  1:519305/1‑139 (MQ=255)                                                    tgCTCCGTCAGCGCACGCAACTGATAAAGCGTATTGAAGGGCAGAAACTGGATGCCGCTACGTTGATAAATATCGCGTTTGCCGAGTTGTTGTTGTGCCTGCGCCATTAGGCCATTGGTGCGGCTATCGCGATAAGCaa                                                                                  <  1:61265/139‑1 (MQ=255)                                                        ccGTCAGCGCACGCAACTGATAAAGCGTATTGAAGGGCAGAAACTGGATGCCGCTACGTTGATAAATATCGCGTTTGCCGAg                                                                                                                                       >  2:114691/1‑82 (MQ=255)                                                        ccGTCAGCGCACGCAACTGATAAAGCGTATTGAAGGGCAGAAACTGGATGCCGCTACGTTGATAAATATCGCGTTTGCCGAg                                                                                                                                       <  1:114691/82‑1 (MQ=255)                                                          gTCAGCGCACGCAACTGATAAAGCGTATTGAAGGGCAGAAACTGGATGCCGCTACGTTGATAAATATCGCGTCTGCCGAGTTGTTGTTGTGCCTGCGCCATTAGGCCATTGGTGCGGCTATCGCGATAAGCAACGGGCa                                                                            <  1:1192978/139‑1 (MQ=255)                                                                gcacgcaACTGATAAAGCGTATTGAAGGGCAGAAACTGGATGCCGCTACGTTGATAAATATCGCGTTTGCCGAGTTGTTGTTGTGCCTGCGCCATTAGGCCATTGGTGCGGCTATCGCGATAAGCAACGGGCAGGCCca                                                                      <  1:856360/139‑1 (MQ=255)                                                                       aCTGATAAAGCGTATTGAAGGGCAGAAACTGGATGCCGCTACGTTGATAAATATCGCGTTTGCCGAGTTGTTGTTGTGCCTGCGCCATTAGGCCATTGGTGCGGCTATCGCGATAAGCAACGGGCAGGCCCACACGCTg                                                               <  1:553422/139‑1 (MQ=255)                                                                        cTGATAAAGCGTATTGAAGGGCAGAAACTGGATGCCGCTACGTTGATAAATATCGCGTTTGCCGAGTTGTTGTTGTGCCTGCGCCATTAGGCCATTGGTGCGGCTATCGCGATAAGCAACGGGCAGGCCCACACGCTGa                                                              <  1:919934/139‑1 (MQ=255)                                                                                gCGTATTGAAGGGCAGAAACTGGATGCCGCTACGTTGATAAATATCGCGTTTGCCGAGTTGTTGTTGTGCCTGCGCCATTAGGCCATTGGTGCGGCTATCGCGATAAGCAACGGGCAGGCCCACACGCTGACCCTGTTg                                                      >  1:1559992/1‑139 (MQ=255)                                                                                gCGTATTGAAGGGCAGAAACTGGATGCCGCTACGTTGATAAATATCGCGTTTGCCGAGTTGTTGTTGTGCCTGCGCCATTAGGCCATTGGTGCGGCTATCGCGATAAGCAACGGGCAGGCCCACACGCTGACCCTGTTg                                                      >  1:673670/1‑139 (MQ=255)                                                                                gCGTATTGAAGGGCAGAAACTGGATGCCGCTACGTTGATAAATATCGCGTTTGCCGA‑‑‑GTTGTTGTGCCTGCGCCATTAGGCCATTGGTGCGGCTATCGCGATAAGCAACGGGCAGGCCCACACGCTGa                                                              >  1:1607179/1‑128 (MQ=255)                                                                                gCGTATTGAAGGGCAGAAACTGGATGCCGCTACGTTGATAAATATCGCGTTTGCCGA‑‑‑GTTGTTGTGCCTGCGCCATTAGGCCATTGGTGCGGCTATCGCGATAAGCAACGGGCAGGCCCACACGCTGa                                                              <  2:1607179/128‑1 (MQ=255)                                                                                   tATTGAAGGGCAGAAACTGGATGCCGCTACGTTGATAAATATCGCGTTTGCCGAGTTGTTGTTGTGCCTGCGCCATTAGGCCATTGGTGCGGCTATCGCGATAAGCAACggg                                                                              >  1:1091682/1‑112 (MQ=255)                                                                                   tATTGAAGGGCAGAAACTGGATGCCGCTACGTTGATAAATATCGCGTTTGCCGAGTTGTTGTTGTGCCTGCGCCATTAGGCCATTGGTGCGGCTATCGCGATAAGCAACggg                                                                              <  2:1091682/112‑1 (MQ=255)                                                                                    aTTGAAGGGCAGAAACTGGATGCCGCTACGTTGATAAATATCGCGTTTGCCGAgtt                                                                                                                                     >  1:1546892/1‑56 (MQ=255)                                                                                    aTTGAAGGGCAGAAACTGGATGCCGCTACGTTGATAAATATCGCGTTTGCCGAgtt                                                                                                                                     <  2:1546892/56‑1 (MQ=255)                                                                                     ttGAAGGGCAGAAACTGGATGCCGCTACGTTGATAAATATCGCGTTTGCCGAGTTGTTGTTGTGCCTGCGCCAtt                                                                                                                 <  2:742398/75‑1 (MQ=255)                                                                                     ttGAAGGGCAGAAACTGGATGCCGCTACGTTGATAAATATCGCGTTTGCCGAGTTGTTGTTGTGCCTGCGCCAtt                                                                                                                 >  1:742398/1‑75 (MQ=255)                                                                                     ttGAAGGGCAGAAACTGGATGCCGCTACGTTGATAAATATCGCGTTTGCCGAGTTGTTGTTGTGCCTGCGCCATTAGGCCATTGGTGCGGCTATCGCGATAAGCAACGGGCAGGCCCACACGCTGACCCTGTTGGTCGa                                                 >  2:946917/1‑139 (MQ=255)                                                                                     ttGAAGGGCAGAAACTGGATGCCGCTACGTTGATAAATATCGCGTTTGCCGAGTTGTTGTTGTGCCTGCGCCATTAGGCCATTGGTGCGGCTATCGCGATAAGCAACGGGCAGGCCCACACGCTGACCCTGTTGGTCGa                                                 <  2:519305/139‑1 (MQ=255)                                                                                     ttGAAGGGCAGAAACTGGATGCCGCTACGTTGATAAATATCGCGTTTGCCGA‑‑‑GTTGTTGTGCCTGCGCCATTAGGCCATTGGTGCGGCTATCGCGATAAGCAACGGGCAGGCCCACACGCTGACCCTGTTGGTCGagca                                              >  2:234205/1‑139 (MQ=255)                                                                                       gAAGGGCAGAAACTGGATGCCGCTACGTTGATAAATATCGCGTTTGCCGAGTTGTTGTTGTGCCTGCGCCATTAGGCCATTGGTGCGGCTATCGCGATAAGCAACGGGCAGGCCCACACGCTGACCCTGTTGGTCGagc                                               <  1:1384503/139‑1 (MQ=255)                                                                                          gggCAGAAACTGGATGCCGCTACGTTGATAAATATCGCGTTTGCCGAGTTGTTGTTGTGCCTGCGCCATTAGGCCATTGGTGCGGCTATCGCGATAAGCAACg                                                                                <  2:1315917/103‑1 (MQ=255)                                                                                          gggCAGAAACTGGATGCCGCTACGTTGATAAATATCGCGTTTGCCGAGTTGTTGTTGTGCCTGCGCCATTAGGCCATTGGTGCGGCTATCGCGATAAGCAACg                                                                                >  1:1315917/1‑103 (MQ=255)                                                                                          gggCAGAAACTGGATGCCGCTACGTTGATAAATATCGCGTTTGCCGAGTTGTTGTTGTGCCTGCGCCATTAGGCCATTGGTGCGGCTATCGCGATAAGCAACGGGCAGGCCCACACg                                                                  <  1:1592434/117‑1 (MQ=255)                                                                                          gggCAGAAACTGGATGCCGCTACGTTGATAAATATCGCGTTTGCCGAGTTGTTGTTGTGCCTGCGCCATTAGGCCATTGGTGCGGCTATCGCGATAAGCAACGGGCAGGCCCACACg                                                                  >  2:1592434/1‑117 (MQ=255)                                                                                               gAAACTGGATGCCGCTACGTTGATAAATATCGCGTTTGCCGAGTTGTTGTTGTGCCTGCGCCATTAGGCCATTGGTGCGGCTATCGCGATAAGCAACGGGCAGGCCCACACGCTGACCCTGTTGGTCGAGCAGCACaaa                                       >  1:463716/1‑139 (MQ=255)                                                                                                aaaCTGGATGCCGCTACGTTGATAAATATCGCGTTTGCCGAGTTGTTGTTGTGCCTGCGCCATTAGGCCATTGGTGCGGCTATCGCGATAAGCAACGGGCAGGCCCACACGCTGACCCTGTTGGTCGAGCAGCACAAAg                                      >  1:43423/1‑139 (MQ=255)                                                                                                   cTGGATGCCGCTACGTTGATAAATATCGCGTTTGCCGAGTTGTTGTTGTGCCTGCGCCATTAGGCCATTGGTGCGGCTATCGCGATAAGCAACGGGCAGGCCCACACGCTGACCCTGTTGGTCGAGCAGCACAAAGTcc                                   <  1:739447/139‑1 (MQ=255)                                                                                                    tGGATGCCGCTACGTTGATAAATATCGCGTTTGCCGAGTTGTTGTTGTGCCTGCGCCATTAGGCCATTGGTGCGGCTATCGCGATAAGCAACGGGCAGGCCCACACGCTGACCCTGTTGGTCGAGCAGCACAAAGTCCa                                  <  2:291132/139‑1 (MQ=255)                                                                                                     ggATGCCGCTACGTTGATAAATATCGCGTTTGCCGAGTTGTTGTTGTGCCTGCGCCATTAGGCCATTGGTGCGGCTATCGCGATAAGCAACGGGCAGGCCCACACGCTGACCCTGTTGGTCGAGCAGCACAAAGTCCAc                                 <  2:1559992/139‑1 (MQ=255)                                                                                                          ccGCTACGTTGATAAATATCGCGTTTGCCGAGTTGTTGTTGTGCCTgcgc                                                                                                                     <  2:15277/50‑1 (MQ=255)                                                                                                          ccGCTACGTTGATAAATATCGCGTTTGCCGAGTTGTTGTTGTGCCTgcgc                                                                                                                     >  1:15277/1‑50 (MQ=255)                                                                                                           cGCTACGTTGATAAATATCGCGTTTGCCGAGTTGTTGTTGTGCCTGCGCCATTAGGCCATTGGTGCGGCTATCGCGATAAGCAACGGGCAGGCCCACACGCTg                                                               >  2:89050/1‑103 (MQ=255)                                                                                                           cGCTACGTTGATAAATATCGCGTTTGCCGAGTTGTTGTTGTGCCTGCGCCATTAGGCCATTGGTGCGGCTATCGCGATAAGCAACGGGCAGGCCCACACGCTg                                                               <  1:89050/103‑1 (MQ=255)                                                                                                           cGCTACGTTGATAAATATCGCGTTTGCCGAGTTGTTGTTGTGCCTGCGCCATTAGGCCATTGGTGCGGCTATCGCGATAAGCAACGGGCAGGCCCACACGCTGACCCTGTTGGTCGAGCAGCACAAAGTCCACGCCCCa                           >  2:1452592/1‑139 (MQ=255)                                                                                                              tACGTTGATAAATATCGCGTTTGCCGAGTTGTTGTTGTGCCTGCGCCATTAGGCCATTGGTGCGGCTATCGCGATAAGCAACGGGCAGGCCCACACGCTGACCCTGTTGGTCGAGCAGCACAAAGTCCACGCCCCAGGt                        >  2:440497/1‑139 (MQ=255)                                                                                                                cGTTGATAAATATCGCGTTTGCCGAGTTGTTGTTGTGCCTGCGCCATTAGGCCATTGGTGCGGCTATCGCGATAAGCAACGGGCAGGCCCACACGCTGACCCTGTTGGTCGAGCAGCACAAAGTCCACGCCCCAGGTAt                      >  2:1010507/1‑139 (MQ=255)                                                                                                                 gTTGATAAATATCGCGTTTGCCGAGTTGTTGTTGTGCCTGCGCCATTAGGCCATTGGTGCGGCTATCGCGATAAGCAACGGGCAGGCCCACACGCTGACCCTGTTGGTCGAGCAGCACAAAGTCCACGCCCCAGGTATc                     <  2:463716/139‑1 (MQ=255)                                                                                                                          tatCGCGTTTGCCGAGTTGTTGTTGTGCCTGCGCCATTAGGCCATTGGTGCGGCTATCGCGATAAGCAACGGGCAGGCCCACACGCTGACCCTGTTGGTCGAGCAGCACAAAGTCCa                                  >  1:158921/1‑117 (MQ=255)                                                                                                                          tatCGCGTTTGCCGAGTTGTTGTTGTGCCTGCGCCATTAGGCCATTGGTGCGGCTATCGCGATAAGCAACGGGCAGGCCCACACGCTGACCCTGTTGGTCGAGCAGCACAAAGTCCa                                  <  2:158921/117‑1 (MQ=255)                                                                                                                           atCGCGTTTGCCGAGTTGTTGTTGTGCCTGCGCCATTAGGCCATTGGTGCGGCTATCGCGATAAGCAACGGGCAGGCCCACACGCTGACCCTGTTGGTCGAGCAGcaca                                         >  2:1265838/1‑109 (MQ=255)                                                                                                                           atCGCGTTTGCCGAGTTGTTGTTGTGCCTGCGCCATTAGGCCATTGGTGCGGCTATCGCGATAAGCAACGGGCAGGCCCACACGCTGACCCTGTTGGTCGAGCAGcaca                                         <  1:1265838/109‑1 (MQ=255)                                                                                                                           atCGCGTTTGCCGAGTTGTTGTTGTGCCTGCGCCATTAGGCCATTGGTGCGGCTATCGCGATAAGCAACGGGCAGGCCCACACGCTGACCCTGTTGGTCGAGCAGCACAAAGTCCACGCCCCAGGTATCAATCCCAATg           <  2:837519/139‑1 (MQ=255)                                                                                                                               cgTTTGCCGAGTTGTTGTTGTGCCTGCGCCATTAGGCCATTGGTGCGGCTATCGCGATAAGCAACggg                                                                              <  1:1209569/68‑1 (MQ=255)                                                                                                                               cgTTTGCCGAGTTGTTGTTGTGCCTGCGCCATTAGGCCATTGGTGCGGCTATCGCGATAAGCAACggg                                                                              >  2:1209569/1‑68 (MQ=255)                                                                                                                               cgTTTGCCGAGTTGTTGTTGTGCCTGCGCCATTAGGCCATTGGTGCGGCTATCGCGATAAGCAACGGGCAGGCCCACACGCTGACCCTGTTGGTCGAGCAGCACAAAGTcc                                   >  1:1443152/1‑111 (MQ=255)                                                                                                                               cgTTTGCCGAGTTGTTGTTGTGCCTGCGCCATTAGGCCATTGGTGCGGCTATCGCGATAAGCAACGGGCAGGCCCACACGCTGACCCTGTTGGTCGAGCAGCACAAAGTcc                                   <  2:1443152/111‑1 (MQ=255)                                                                                                                                    gCCGAGTTGTTGTTGTGCCTGCGCCATTAGGCCATTGGTGCGGCTATCGCGATAAGCAACGGGCAGGCCCACACGCTGACCCTGTTGGTCGAGCAGCACAAAGTCCACGCCCCAGGTATCAATCCCAATGCTATCGATa  <  2:677117/139‑1 (MQ=255)                                                                                                                                    gCCGAGTTGTTGTTGTGCCTGCGCCATTAGGCCATTGGTGCGGCTATCGCGATAAGCAACGGGCAGGCCCACACGCTGACCCTGTTGGTCGAGCAGCACAAAGTCCACGCCCCAGGTATCAATCCCAATGCTATCGATa  >  2:903823/1‑139 (MQ=255)                                                                                                                                        |                                                                                                                                       TAATCCGGCATCAGCAGAGCGTGAGCAATGTGTGGAATAAGTTCAGGTTGTTGCTCCGTCAGCGCACGCAACTGATAAAGCGTATTGAAGGGCAGAAACTGGATGCCGCTACGTTGATAAATATCGCGTTTGCCGAGTTGTTGTTGTGCCTGCGCCATTAGGCCATTGGTGCGGCTATCGCGATAAGCAACGGGCAGGCCCACACGCTGACCCTGTTGGTCGAGCAGCACAAAGTCCACGCCCCAGGTATCAATCCCAATGCTATCGATA  >  NC_000913/4096961‑4097230

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.